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The map label for this gene is fecI [C]

Identifier: 161525150

GI number: 161525150

Start: 2177291

End: 2177935

Strand: Direct

Name: fecI [C]

Synonym: Bmul_1978

Alternate gene names: 161525150

Gene position: 2177291-2177935 (Clockwise)

Preceding gene: 161525149

Following gene: 161525151

Centisome position: 63.14

GC content: 61.71

Gene sequence:

>645_bases
ATGGCGCGTCGCGGATTTTTCACGGTCGCCACAATATTCGCGCGCCTGAAACGTCTTCGTAGACATGGATCGCCACCCAC
TTCGCGCACGATGACCGACCCCGACCGCGACATCACCGCGATAGTGATGCGAGAACGAGCGAGACTCGTGAATTTCATCC
GGCGTCGCATCAGCAACCCGGACGATGCCGACGACATTCTGCAGGACGTCTTCCACGAGTTCGTGCAGGCTTATCGCCTT
CCCGCGGTAATCGAACAGGCGAGCGCATGGCTGTTCCGCGCGGCGCGCAACCGCATCGTCGATCGGTTTCGAAAGAAGAC
GGAGCAACCACTGTCCGACCTGCTCGACATCGACGACGACGCGGACGACGCATATCGCCTCGACCTTCCGCTCCCGACAC
ACGACGCCGGCCCGGAAGCACTATACGCGCGCACGGTGTTGCTGAACGCCTTGCAGCATGCGCTCGACGAGTTGCCGCCG
AACCAGCGAGAGGTGTTCGTCGCGCACGAACTGGAAGGCCGATCCTTCAAGGAGATGGCCGCGCAAAGCGGCGTCACGCT
CAACACGCTGCTCGCGCGCAAACGCTACGCGGTATTGCATCTGCGCGCGCGGCTGCAGCCCATTTATGACGAACTGGATA
TCTAG

Upstream 100 bases:

>100_bases
GCAGAGGGCGAATAGGACGGCGTGGTGAGCGGGCAAGGTCGTTGTGCGGCGTCGGAACGAGCCGATTCGACCGGCGGCAG
GAGGATCGTCGCGGGTCGAT

Downstream 100 bases:

>100_bases
AGGAGTCTGCGAATGAATTTTCGAATCCGCTGTGCGGGCAAAGCGCTACTCGCCGTCATCGCCATCGTCGTGCTCGGATG
GCTCGTCATGATGCTTTGGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-70 Factor Ecf Subfamily; RNA Polymerase Sigma-30 Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARRGFFTVATIFARLKRLRRHGSPPTSRTMTDPDRDITAIVMRERARLVNFIRRRISNPDDADDILQDVFHEFVQAYRL
PAVIEQASAWLFRAARNRIVDRFRKKTEQPLSDLLDIDDDADDAYRLDLPLPTHDAGPEALYARTVLLNALQHALDELPP
NQREVFVAHELEGRSFKEMAAQSGVTLNTLLARKRYAVLHLRARLQPIYDELDI

Sequences:

>Translated_214_residues
MARRGFFTVATIFARLKRLRRHGSPPTSRTMTDPDRDITAIVMRERARLVNFIRRRISNPDDADDILQDVFHEFVQAYRL
PAVIEQASAWLFRAARNRIVDRFRKKTEQPLSDLLDIDDDADDAYRLDLPLPTHDAGPEALYARTVLLNALQHALDELPP
NQREVFVAHELEGRSFKEMAAQSGVTLNTLLARKRYAVLHLRARLQPIYDELDI
>Mature_213_residues
ARRGFFTVATIFARLKRLRRHGSPPTSRTMTDPDRDITAIVMRERARLVNFIRRRISNPDDADDILQDVFHEFVQAYRLP
AVIEQASAWLFRAARNRIVDRFRKKTEQPLSDLLDIDDDADDAYRLDLPLPTHDAGPEALYARTVLLNALQHALDELPPN
QREVFVAHELEGRSFKEMAAQSGVTLNTLLARKRYAVLHLRARLQPIYDELDI

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24727; Mature: 24595

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRGFFTVATIFARLKRLRRHGSPPTSRTMTDPDRDITAIVMRERARLVNFIRRRISNP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DDADDILQDVFHEFVQAYRLPAVIEQASAWLFRAARNRIVDRFRKKTEQPLSDLLDIDDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDAYRLDLPLPTHDAGPEALYARTVLLNALQHALDELPPNQREVFVAHELEGRSFKEMA
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH
AQSGVTLNTLLARKRYAVLHLRARLQPIYDELDI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARRGFFTVATIFARLKRLRRHGSPPTSRTMTDPDRDITAIVMRERARLVNFIRRRISNP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DDADDILQDVFHEFVQAYRLPAVIEQASAWLFRAARNRIVDRFRKKTEQPLSDLLDIDDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ADDAYRLDLPLPTHDAGPEALYARTVLLNALQHALDELPPNQREVFVAHELEGRSFKEMA
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH
AQSGVTLNTLLARKRYAVLHLRARLQPIYDELDI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA