The gene/protein map for NC_010084 is currently unavailable.
Definition Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence.
Accession NC_010084
Length 3,448,466

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The map label for this gene is yohF [C]

Identifier: 161525069

GI number: 161525069

Start: 2075415

End: 2076239

Strand: Reverse

Name: yohF [C]

Synonym: Bmul_1897

Alternate gene names: 161525069

Gene position: 2076239-2075415 (Counterclockwise)

Preceding gene: 161525070

Following gene: 161525063

Centisome position: 60.21

GC content: 67.03

Gene sequence:

>825_bases
ATGCATGACAACGCCGGTTCGCCGCGCAGTCGGCAGCCGGTGCCCCTTCATCGTCAAATTTTCGAAAGGTATCCGATCAT
GAGCAAGCTGGCAGACAAGGTCGCGATCGTCACGGGCGCATCGAAAGGCATCGGCGCGGCGATTGCAAAGGCGCTGGCCG
CCGAAGGCGCGGCGGTCGTCGTCAACTACGCGAGCAGCAAGGCGGGCGCGGATGCGGTCGTGAGCGCGATCGTCGACGCG
GGCGGGCGCGCGGTCGCGGTGGGCGGCGACGTGTCGAAGGCGGCCGACGCGCAGCGCATCGTCGACACGGCGATCGAGAC
CTACGGCCGTCTCGACGTACTCGTGAACAATTCCGGCATCTACGAGTTCGCGCCGATCGAGGCCATTACCGAAGAGCACT
ACCGCAAGCAGTTCGATACGAACGTGTTCGGCCTGCTGCTGACGACGCAGGCGGCCGCCAGGCATCTCGGCGAAGGCGCG
AGCATCATCAACATCAGCTCGGCGATCACGAGCATGGTGCCGCCCGCGAGCGCCGTCTACAGCGGCACGAAGGGCGCGGT
CGACGCGATCACCGGTGTGCTCGCGAACGAACTCGCGCCGCGCAAGATTCGCGTGAACGCGATCAACCCGGGATTGGTCG
TGACCGAAGGCACGCATACGACGGGCATCATCGGTTCGGACCTCGAAAAGCAGGTGCTCGCCGAAACGCCGCTGGGCCGC
CACGGCGCGCCGGACGACATCGCGTCGGTCGCGGTGTTCCTCGCGTCGAACGACGCGCGCTGGCTGACGGGCCAGCATCT
GGTCGCGAGCGGCGGGCTGCGCTGA

Upstream 100 bases:

>100_bases
CGCCTGGCTCGGCACCGGCTGAGCGCCGGCCGATTGTTCGGCTGGCCGCGCCACACAATTCGCATCGAGCCGCTTTATCG
CCGCGGACCGAATCGCCACC

Downstream 100 bases:

>100_bases
GTGGCCGCGCGGCGCGCGCGCGAATGCGATCGTGCGCCGCTACGCGCCGATCGCAAGCGCGTGCGCGCCGACGTGCCAGC
GCAGGCTCTCGACGGCGAGC

Product: short-chain dehydrogenase/reductase SDR

Products: 3-oxoacyl-[acyl-carrier protein]; NADPH; H+

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MHDNAGSPRSRQPVPLHRQIFERYPIMSKLADKVAIVTGASKGIGAAIAKALAAEGAAVVVNYASSKAGADAVVSAIVDA
GGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGIYEFAPIEAITEEHYRKQFDTNVFGLLLTTQAAARHLGEGA
SIINISSAITSMVPPASAVYSGTKGAVDAITGVLANELAPRKIRVNAINPGLVVTEGTHTTGIIGSDLEKQVLAETPLGR
HGAPDDIASVAVFLASNDARWLTGQHLVASGGLR

Sequences:

>Translated_274_residues
MHDNAGSPRSRQPVPLHRQIFERYPIMSKLADKVAIVTGASKGIGAAIAKALAAEGAAVVVNYASSKAGADAVVSAIVDA
GGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGIYEFAPIEAITEEHYRKQFDTNVFGLLLTTQAAARHLGEGA
SIINISSAITSMVPPASAVYSGTKGAVDAITGVLANELAPRKIRVNAINPGLVVTEGTHTTGIIGSDLEKQVLAETPLGR
HGAPDDIASVAVFLASNDARWLTGQHLVASGGLR
>Mature_274_residues
MHDNAGSPRSRQPVPLHRQIFERYPIMSKLADKVAIVTGASKGIGAAIAKALAAEGAAVVVNYASSKAGADAVVSAIVDA
GGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGIYEFAPIEAITEEHYRKQFDTNVFGLLLTTQAAARHLGEGA
SIINISSAITSMVPPASAVYSGTKGAVDAITGVLANELAPRKIRVNAINPGLVVTEGTHTTGIIGSDLEKQVLAETPLGR
HGAPDDIASVAVFLASNDARWLTGQHLVASGGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=37.0967741935484, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=34.9397590361446, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=34.136546184739, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=32.5490196078431, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=31.6602316602317, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=29.4820717131474, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI59889578, Length=221, Percent_Identity=33.0316742081448, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=31.4285714285714, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI10190704, Length=263, Percent_Identity=31.1787072243346, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=34.4086021505376, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=29.7959183673469, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI33667109, Length=204, Percent_Identity=31.8627450980392, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.1632653061224, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4503301, Length=283, Percent_Identity=25.4416961130742, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=32.9787234042553, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=28.0155642023346, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=31.7647058823529, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI44680136, Length=188, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI44680133, Length=188, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI17738292, Length=188, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=35.2459016393443, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=35.3413654618474, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=34.5528455284553, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=33.3333333333333, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789378, Length=275, Percent_Identity=33.8181818181818, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=30.5220883534137, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=30.1204819277108, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=31.8897637795276, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=30.1255230125523, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=30.6451612903226, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788891, Length=264, Percent_Identity=31.4393939393939, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=28.6852589641434, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787526, Length=256, Percent_Identity=25.78125, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=26.953125, Blast_Score=66, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=36.6141732283465, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=32.1705426356589, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=33.4600760456274, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=32.5396825396825, Blast_Score=110, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=255, Percent_Identity=35.2941176470588, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=29.8892988929889, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=31.9391634980989, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=32.089552238806, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=32.6612903225806, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=30.3846153846154, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=31.1787072243346, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=31.3492063492063, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=269, Percent_Identity=29.7397769516729, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=33.206106870229, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=268, Percent_Identity=29.8507462686567, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=31.2977099236641, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=30, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=31.203007518797, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=29.7397769516729, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=30.4182509505703, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=30.1115241635688, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=27.5471698113208, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508651, Length=251, Percent_Identity=28.2868525896414, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=34.5744680851064, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=28.6259541984733, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=26.4, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=273, Percent_Identity=29.3040293040293, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=29.0155440414508, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=34.0314136125654, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322226, Length=189, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=27.2357723577236, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323882, Length=252, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=38.5826771653543, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=37.4501992031873, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=35.4838709677419, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=35.9375, Blast_Score=127, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=33.2, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=32.03125, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=32.0158102766798, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI18859837, Length=252, Percent_Identity=29.7619047619048, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24641232, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648693, Length=205, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355889, Length=205, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007236, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24656154, Length=235, Percent_Identity=28.5106382978723, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI19922628, Length=235, Percent_Identity=28.5106382978723, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24663911, Length=240, Percent_Identity=25.8333333333333, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281364494, Length=202, Percent_Identity=33.1683168316832, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007234, Length=203, Percent_Identity=30.5418719211823, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24641388, Length=216, Percent_Identity=32.4074074074074, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.1.1.100

Molecular weight: Translated: 28222; Mature: 28222

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MHDNAGSPRSRQPVPLHRQIFERYPIMSKLADKVAIVTGASKGIGAAIAKALAAEGAAVV
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEE
VNYASSKAGADAVVSAIVDAGGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGI
EEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
YEFAPIEAITEEHYRKQFDTNVFGLLLTTQAAARHLGEGASIINISSAITSMVPPASAVY
EEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHH
SGTKGAVDAITGVLANELAPRKIRVNAINPGLVVTEGTHTTGIIGSDLEKQVLAETPLGR
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
HGAPDDIASVAVFLASNDARWLTGQHLVASGGLR
CCCCHHHHHEEHEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MHDNAGSPRSRQPVPLHRQIFERYPIMSKLADKVAIVTGASKGIGAAIAKALAAEGAAVV
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCEEE
VNYASSKAGADAVVSAIVDAGGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGI
EEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
YEFAPIEAITEEHYRKQFDTNVFGLLLTTQAAARHLGEGASIINISSAITSMVPPASAVY
EEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHH
SGTKGAVDAITGVLANELAPRKIRVNAINPGLVVTEGTHTTGIIGSDLEKQVLAETPLGR
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHCCCCCC
HGAPDDIASVAVFLASNDARWLTGQHLVASGGLR
CCCCHHHHHEEHEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3R)-3-hydroxyacyl-[acyl-carrier protein]; NADP+

Specific reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]