Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is yhhT [H]
Identifier: 161524877
GI number: 161524877
Start: 1879046
End: 1880998
Strand: Direct
Name: yhhT [H]
Synonym: Bmul_1704
Alternate gene names: 161524877
Gene position: 1879046-1880998 (Clockwise)
Preceding gene: 161524876
Following gene: 161524879
Centisome position: 54.49
GC content: 67.64
Gene sequence:
>1953_bases ATGAGGAAACTGGAACAGCAACGCAGGAACGGCCGAAGGGCACGCTTCCGAGCGGCGCGCCGCGACGCCGGCACCCGCGG CCACACGATCGCGCCGGCCGCCGTGCCGGGTTTGAAAACCTTGACCTCGCTGGCGACGGGCGTCGTCATGGTCTGCGCGA TGTATTTCGGGCGGACCGTGCTGATCCCGATTACGCTGGCCGTGCTGCTGAGCCTTCTGCTGGCACCGCTCGTGGACCTG CTGCGGCGGCTGCGCCTCGGCGAACTGGTCTCGGTGCTCGTCGCCGTCTGGCTGGCGCTGTCGGTGCTGACGGCATTCGG TTTTCTGATCGGCGCGCAGCTGGCCGAGCTGGCGTCCGACTTGCCCCGCTATCAAGTCGCGATCGAACGCCGGGTCGACA ACATCCAGCAAACGGTCGTGGTCCACGCGGATGCAGTCCTCACGCGCACCATCGATGCGCTGAAGCGCGTGGCGCCCGTG CGTGAGGAGCACACGTCCGATAGCAAGCCTGCGGGCCCGGCCGACAAGGCGCCCTTGCCCGTCGAAGTTCATGAGCCGTC GCCTTCGCCGCTGCAGCTCGCGCAAGGGTTTCTTTCGCCGGTCGTCAGCCCGCTCGCGACGATCGGCATCGTGATCGTGA CCGCGATCTTCATCCTGCTGCAGCGCGCCGACCTGCGCGAACGCCTGATTCGGCTTGCCGGCTCGCACGACATGCACCGC ACCACGACGGCAATGAGCGATGCCGCGCGTCGCCTGAGCCGCTACTTTCTCGCGCAGCTGTGCGTCAACGTGTGTGTCGG CGCGGTGTTGAGCCTGGGGCTCGCCGTGATCGGGCTGCCGGGCGCGCTGCTGTTCGGCGTGATTGCGGGATTGATGCGCT TCGTGCCGTACGTCGGCGTCTGGATCGCCGCGTTGCCGGCCACCATTCTCGCTGCCGCCATGAGTCCCGGCTGGTCGATG ATCGTCGCGATCCTGGTGCTTTTCTCCGTGACCGAAGTGGCCGCCGGCCAGTTTCTCGAACCGCTCGTGTACGGTCACAG CACCGGCCTGTCGCCGATCGCGGTGATCGTCGCCGCGATTTTCTGGAGCTGGCTCTGGGGCGCCGTCGGCCTCGTGCTCT CCACGCCGCTCACGCTGTGCCTCGTGATTCTGGGCCGCTATGTCAGCGGACTCGAATTCCTCGACGTGCTGTTCGGCGAC CGACCCGCACTGACGCCAGGCGAGCGCTTCTATCAACGCCTGCTGACCGGCGATCGCGAACGGGCATTGGCGCAGGCCGA TACGCTGCTCAAGAAGCGCTCGCTTTGCGAGTACTACGATGCCGTTGCGCTCGAGGGTCTGCGTCAGGCACGAATCGATC TGATGCGCGGTGTCGTCTCGCCGAAGCAATTGCGGCGCATCCGCGAAACGGTGCTGGATCTCGTACATAGCCTGGAACCC GACCGCGACGCGACACCGACGCCATTGTCCGTCCACGAAGGCCCGACCGATCGCGTGCCGTCGGTACTGTGCATCTCGGG CGGCGGCAAACTGGACGACCTCGTCGCCGCCATCGCGGTATGCCTGCTCCGCCGGCGCGGGTTGCATGCCGAAAGCGCCG GCTACGAGCGCTTTCCGAGGAGCGGCTTTCGCGACCCGCGCCTGTCCGGCGCGGCCGTGATCGGCGTGATCTCGCTCGAC GCCGTCGACGCGCCCCCGTACCTGCGCGACCTGATACGCCGACTGAGTCAGCGCGCGACGACGACCAACATCGTCGTCGG CTTGTGTGGACGCGACACCGAGTGCCCGGCGCTTTGGCGCAAGATGGGCGTGTCGGCGACGCTGTCGTTCGGCGAACTCG TCGATCGCTGCGTGCTGCTCGCGCAGCGTCGCGCGGACGGCGGCGAGCCCGCGCGCGGCAATCCCGTCGCGCCGAACACC GGCGCAGTCGTCCACTATCGACGCGACGCATGA
Upstream 100 bases:
>100_bases TCCTCGCATGACGCATCGCCGCGAGCACCGGCGTCGATCGCCGTCGATCGAGTCGGATCCCCTTGCGCGTCATCGCCGGA TCGTTCCCGGCCACCCTGTC
Downstream 100 bases:
>100_bases TGCTACGCTGCCAGCAACGCGTCGCCGCCGTCCGGTTGCGATCACTCACCCTCCGCCTTCCCAATCGTGCCAGTCCACCG GATGCGATTTCAGATACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MRKLEQQRRNGRRARFRAARRDAGTRGHTIAPAAVPGLKTLTSLATGVVMVCAMYFGRTVLIPITLAVLLSLLLAPLVDL LRRLRLGELVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLTRTIDALKRVAPV REEHTSDSKPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHR TTTAMSDAARRLSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSM IVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVGLVLSTPLTLCLVILGRYVSGLEFLDVLFGD RPALTPGERFYQRLLTGDRERALAQADTLLKKRSLCEYYDAVALEGLRQARIDLMRGVVSPKQLRRIRETVLDLVHSLEP DRDATPTPLSVHEGPTDRVPSVLCISGGGKLDDLVAAIAVCLLRRRGLHAESAGYERFPRSGFRDPRLSGAAVIGVISLD AVDAPPYLRDLIRRLSQRATTTNIVVGLCGRDTECPALWRKMGVSATLSFGELVDRCVLLAQRRADGGEPARGNPVAPNT GAVVHYRRDA
Sequences:
>Translated_650_residues MRKLEQQRRNGRRARFRAARRDAGTRGHTIAPAAVPGLKTLTSLATGVVMVCAMYFGRTVLIPITLAVLLSLLLAPLVDL LRRLRLGELVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLTRTIDALKRVAPV REEHTSDSKPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHR TTTAMSDAARRLSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSM IVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVGLVLSTPLTLCLVILGRYVSGLEFLDVLFGD RPALTPGERFYQRLLTGDRERALAQADTLLKKRSLCEYYDAVALEGLRQARIDLMRGVVSPKQLRRIRETVLDLVHSLEP DRDATPTPLSVHEGPTDRVPSVLCISGGGKLDDLVAAIAVCLLRRRGLHAESAGYERFPRSGFRDPRLSGAAVIGVISLD AVDAPPYLRDLIRRLSQRATTTNIVVGLCGRDTECPALWRKMGVSATLSFGELVDRCVLLAQRRADGGEPARGNPVAPNT GAVVHYRRDA >Mature_650_residues MRKLEQQRRNGRRARFRAARRDAGTRGHTIAPAAVPGLKTLTSLATGVVMVCAMYFGRTVLIPITLAVLLSLLLAPLVDL LRRLRLGELVSVLVAVWLALSVLTAFGFLIGAQLAELASDLPRYQVAIERRVDNIQQTVVVHADAVLTRTIDALKRVAPV REEHTSDSKPAGPADKAPLPVEVHEPSPSPLQLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHR TTTAMSDAARRLSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGVWIAALPATILAAAMSPGWSM IVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAIFWSWLWGAVGLVLSTPLTLCLVILGRYVSGLEFLDVLFGD RPALTPGERFYQRLLTGDRERALAQADTLLKKRSLCEYYDAVALEGLRQARIDLMRGVVSPKQLRRIRETVLDLVHSLEP DRDATPTPLSVHEGPTDRVPSVLCISGGGKLDDLVAAIAVCLLRRRGLHAESAGYERFPRSGFRDPRLSGAAVIGVISLD AVDAPPYLRDLIRRLSQRATTTNIVVGLCGRDTECPALWRKMGVSATLSFGELVDRCVLLAQRRADGGEPARGNPVAPNT GAVVHYRRDA
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=375, Percent_Identity=25.0666666666667, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1787885, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 70234; Mature: 70234
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLEQQRRNGRRARFRAARRDAGTRGHTIAPAAVPGLKTLTSLATGVVMVCAMYFGRTV CCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHH LIPITLAVLLSLLLAPLVDLLRRLRLGELVSVLVAVWLALSVLTAFGFLIGAQLAELASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRYQVAIERRVDNIQQTVVVHADAVLTRTIDALKRVAPVREEHTSDSKPAGPADKAPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VEVHEPSPSPLQLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TTTAMSDAARRLSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WIAALPATILAAAMSPGWSMIVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FWSWLWGAVGLVLSTPLTLCLVILGRYVSGLEFLDVLFGDRPALTPGERFYQRLLTGDRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHH RALAQADTLLKKRSLCEYYDAVALEGLRQARIDLMRGVVSPKQLRRIRETVLDLVHSLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DRDATPTPLSVHEGPTDRVPSVLCISGGGKLDDLVAAIAVCLLRRRGLHAESAGYERFPR CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC SGFRDPRLSGAAVIGVISLDAVDAPPYLRDLIRRLSQRATTTNIVVGLCGRDTECPALWR CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHEEEECCCCCCCHHHHH KMGVSATLSFGELVDRCVLLAQRRADGGEPARGNPVAPNTGAVVHYRRDA HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MRKLEQQRRNGRRARFRAARRDAGTRGHTIAPAAVPGLKTLTSLATGVVMVCAMYFGRTV CCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHH LIPITLAVLLSLLLAPLVDLLRRLRLGELVSVLVAVWLALSVLTAFGFLIGAQLAELASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPRYQVAIERRVDNIQQTVVVHADAVLTRTIDALKRVAPVREEHTSDSKPAGPADKAPLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VEVHEPSPSPLQLAQGFLSPVVSPLATIGIVIVTAIFILLQRADLRERLIRLAGSHDMHR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TTTAMSDAARRLSRYFLAQLCVNVCVGAVLSLGLAVIGLPGALLFGVIAGLMRFVPYVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WIAALPATILAAAMSPGWSMIVAILVLFSVTEVAAGQFLEPLVYGHSTGLSPIAVIVAAI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH FWSWLWGAVGLVLSTPLTLCLVILGRYVSGLEFLDVLFGDRPALTPGERFYQRLLTGDRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHH RALAQADTLLKKRSLCEYYDAVALEGLRQARIDLMRGVVSPKQLRRIRETVLDLVHSLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DRDATPTPLSVHEGPTDRVPSVLCISGGGKLDDLVAAIAVCLLRRRGLHAESAGYERFPR CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC SGFRDPRLSGAAVIGVISLDAVDAPPYLRDLIRRLSQRATTTNIVVGLCGRDTECPALWR CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHEEEECCCCCCCHHHHH KMGVSATLSFGELVDRCVLLAQRRADGGEPARGNPVAPNTGAVVHYRRDA HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]