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The map label for this gene is ygiF [H]

Identifier: 161524879

GI number: 161524879

Start: 1883196

End: 1884728

Strand: Direct

Name: ygiF [H]

Synonym: Bmul_1706

Alternate gene names: 161524879

Gene position: 1883196-1884728 (Clockwise)

Preceding gene: 161524877

Following gene: 161524881

Centisome position: 54.61

GC content: 64.51

Gene sequence:

>1533_bases
ATGGAAAGGGAACTGAAGCTGCTGGTCGACCGCGAGCACGTCGACCGCATCCGCGAATCGCCGCTGTTCGCGGACGGGAA
GCACGCCGACTTGCCGGCCACACTGCTGACCAGCACCTACTACGACACATCGGAGTTTGCGTTTCGTCGCTGCAATGCAT
CGCTGCGCGTGCGAACGCAAGGCGACAAGACCGTCCAGACCATCAAGATCGACGGCGCGACATCGGCAGGCCTATACGAG
CGCGACGAATTCGAAATGCCGGTGGAAGGCACTGCGCCCGATCTGAGCTTGTTCAACGACTCGATCCCCGCCGACAGCGA
CCTCGGCAAGCTGATTCGCGACGAACGCACCGCGACGGACCTCGGACCGCGCTTCGTCACGAAGATTCGCCGCACGCTGC
TGCCGTTGCGCACGCAACCGGGCGAGGAAATCGAGTTTGCGATCGACGAAGGCACGATCGAAACCGAGACGGATTCGGCA
TCCGTCGTCGCCGTCGAAATGGAACTGAAGCAAGGCCGCCCCGAGCGTCTTTATCACATTGCGCTCGAACTGCTCGCAAC
GGTGCCGCTGCGCTTCGACCCGATGAGCAAGGCCGATCGCGGCTATGAAATGCTGCTGCAACACCATCAGCCGCCAGTGA
AGGCGAAGCCCGTGACGCTTCACAAGCGGGACAGCATCGAAGACGCCTTCCGCACGATCGCGCACAACTGCCTCGAGCAG
GTTCACGCGAACGAGCGCGGTGTCGTGTCCGGTCACGACCCGTCGAGCGTGCACCAGATGCGCGTCGGCCTGCGGCGCCT
GCGCTCGGCGCTCGATCTGTTCGACAAGATGATCCCCGCCTATCCGGGGCTTCAGGACGAACTGCGCTGGATCGCGTCGG
AGCTCGGCGAGGCGCGCGACTGGGAGGTCCTTGCCCGCTCGACGCTCGGCCAGGCACTCGCGCAAACCGAGAAGGAGCAC
GAACGCCAGGCGGTGGAGCGCGCGTGCAAGCGCGTGGCGACGGAAAAGCGCGCCAGTGCGGCCGCTGCCGTGCAGTCCGT
CCGCTACACGCGACTGATCCTGCAACTGACTGTGTGGCTCGACAGCGCACGCTGGCGTGACGGCATGTCGAGGCAGGCGT
CCGAGGCCGTGCAGAAACCGGTGAATCGGCTGGCATCCGACATCCTGCGCCGCCGGCACAAAAAATTGCTGAAGCGCGGC
CGAGGGCTAGCCGATCTCGACGATCGCCGCCGCCATCGCGCACGCATCGCGGCGAAAAAACTTCGGTATGCGACCGAATT
CTTTGCGTCGCTGTTTCCGAAGTCGGCGGTAAAGCACTATGTGGCGACGTTGAGCAAGCTCCAGGACGATCTGGGCTGGC
GCAACGATGCCGTGGTCGCCCCGCGCCTGCTCGATTCGCTGCCGCGCGCCGCCGCCGATACCGTAGCGGGCGCCGCTTTC
GTGCGGGGGTTCTGGGCTTCACGCGTGGCCGCCGATTACGCCCAGATGAAAAGATTGTGGAAACGCTTCAGGCGGCTGTC
TCCCCCTCAATAG

Upstream 100 bases:

>100_bases
TGCGAAAAATGCTCGCGTGTGTCGATCGGACTGGCCTGCTATCGCATGGCCGCCATCCATGAAGCAAATGCGTCGGAACG
ACGACGCGCGAGGGAGTGCG

Downstream 100 bases:

>100_bases
CGCTCGAGCGGCGGCCATGTCGTATCGCGGCCGGCATCGGCGCCGAGCCGCTCCGACGAGGGGGCTCGCGCGACATGCCG
TGCCGCGCGAACACGCGAGG

Product: CHAD domain-containing protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MERELKLLVDREHVDRIRESPLFADGKHADLPATLLTSTYYDTSEFAFRRCNASLRVRTQGDKTVQTIKIDGATSAGLYE
RDEFEMPVEGTAPDLSLFNDSIPADSDLGKLIRDERTATDLGPRFVTKIRRTLLPLRTQPGEEIEFAIDEGTIETETDSA
SVVAVEMELKQGRPERLYHIALELLATVPLRFDPMSKADRGYEMLLQHHQPPVKAKPVTLHKRDSIEDAFRTIAHNCLEQ
VHANERGVVSGHDPSSVHQMRVGLRRLRSALDLFDKMIPAYPGLQDELRWIASELGEARDWEVLARSTLGQALAQTEKEH
ERQAVERACKRVATEKRASAAAAVQSVRYTRLILQLTVWLDSARWRDGMSRQASEAVQKPVNRLASDILRRRHKKLLKRG
RGLADLDDRRRHRARIAAKKLRYATEFFASLFPKSAVKHYVATLSKLQDDLGWRNDAVVAPRLLDSLPRAAADTVAGAAF
VRGFWASRVAADYAQMKRLWKRFRRLSPPQ

Sequences:

>Translated_510_residues
MERELKLLVDREHVDRIRESPLFADGKHADLPATLLTSTYYDTSEFAFRRCNASLRVRTQGDKTVQTIKIDGATSAGLYE
RDEFEMPVEGTAPDLSLFNDSIPADSDLGKLIRDERTATDLGPRFVTKIRRTLLPLRTQPGEEIEFAIDEGTIETETDSA
SVVAVEMELKQGRPERLYHIALELLATVPLRFDPMSKADRGYEMLLQHHQPPVKAKPVTLHKRDSIEDAFRTIAHNCLEQ
VHANERGVVSGHDPSSVHQMRVGLRRLRSALDLFDKMIPAYPGLQDELRWIASELGEARDWEVLARSTLGQALAQTEKEH
ERQAVERACKRVATEKRASAAAAVQSVRYTRLILQLTVWLDSARWRDGMSRQASEAVQKPVNRLASDILRRRHKKLLKRG
RGLADLDDRRRHRARIAAKKLRYATEFFASLFPKSAVKHYVATLSKLQDDLGWRNDAVVAPRLLDSLPRAAADTVAGAAF
VRGFWASRVAADYAQMKRLWKRFRRLSPPQ
>Mature_510_residues
MERELKLLVDREHVDRIRESPLFADGKHADLPATLLTSTYYDTSEFAFRRCNASLRVRTQGDKTVQTIKIDGATSAGLYE
RDEFEMPVEGTAPDLSLFNDSIPADSDLGKLIRDERTATDLGPRFVTKIRRTLLPLRTQPGEEIEFAIDEGTIETETDSA
SVVAVEMELKQGRPERLYHIALELLATVPLRFDPMSKADRGYEMLLQHHQPPVKAKPVTLHKRDSIEDAFRTIAHNCLEQ
VHANERGVVSGHDPSSVHQMRVGLRRLRSALDLFDKMIPAYPGLQDELRWIASELGEARDWEVLARSTLGQALAQTEKEH
ERQAVERACKRVATEKRASAAAAVQSVRYTRLILQLTVWLDSARWRDGMSRQASEAVQKPVNRLASDILRRRHKKLLKRG
RGLADLDDRRRHRARIAAKKLRYATEFFASLFPKSAVKHYVATLSKLQDDLGWRNDAVVAPRLLDSLPRAAADTVAGAAF
VRGFWASRVAADYAQMKRLWKRFRRLSPPQ

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=406, Percent_Identity=26.1083743842365, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 57892; Mature: 57892

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERELKLLVDREHVDRIRESPLFADGKHADLPATLLTSTYYDTSEFAFRRCNASLRVRTQ
CCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEC
GDKTVQTIKIDGATSAGLYERDEFEMPVEGTAPDLSLFNDSIPADSDLGKLIRDERTATD
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
LGPRFVTKIRRTLLPLRTQPGEEIEFAIDEGTIETETDSASVVAVEMELKQGRPERLYHI
CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEEHHHCCCHHHHHHH
ALELLATVPLRFDPMSKADRGYEMLLQHHQPPVKAKPVTLHKRDSIEDAFRTIAHNCLEQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
VHANERGVVSGHDPSSVHQMRVGLRRLRSALDLFDKMIPAYPGLQDELRWIASELGEARD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
WEVLARSTLGQALAQTEKEHERQAVERACKRVATEKRASAAAAVQSVRYTRLILQLTVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSARWRDGMSRQASEAVQKPVNRLASDILRRRHKKLLKRGRGLADLDDRRRHRARIAAKK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LRYATEFFASLFPKSAVKHYVATLSKLQDDLGWRNDAVVAPRLLDSLPRAAADTVAGAAF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VRGFWASRVAADYAQMKRLWKRFRRLSPPQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERELKLLVDREHVDRIRESPLFADGKHADLPATLLTSTYYDTSEFAFRRCNASLRVRTQ
CCCHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEC
GDKTVQTIKIDGATSAGLYERDEFEMPVEGTAPDLSLFNDSIPADSDLGKLIRDERTATD
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
LGPRFVTKIRRTLLPLRTQPGEEIEFAIDEGTIETETDSASVVAVEMELKQGRPERLYHI
CCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEEHHHCCCHHHHHHH
ALELLATVPLRFDPMSKADRGYEMLLQHHQPPVKAKPVTLHKRDSIEDAFRTIAHNCLEQ
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
VHANERGVVSGHDPSSVHQMRVGLRRLRSALDLFDKMIPAYPGLQDELRWIASELGEARD
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH
WEVLARSTLGQALAQTEKEHERQAVERACKRVATEKRASAAAAVQSVRYTRLILQLTVWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSARWRDGMSRQASEAVQKPVNRLASDILRRRHKKLLKRGRGLADLDDRRRHRARIAAKK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LRYATEFFASLFPKSAVKHYVATLSKLQDDLGWRNDAVVAPRLLDSLPRAAADTVAGAAF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VRGFWASRVAADYAQMKRLWKRFRRLSPPQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]