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The map label for this gene is yrpB [H]

Identifier: 161524679

GI number: 161524679

Start: 1658390

End: 1659580

Strand: Direct

Name: yrpB [H]

Synonym: Bmul_1506

Alternate gene names: 161524679

Gene position: 1658390-1659580 (Clockwise)

Preceding gene: 161524678

Following gene: 161524680

Centisome position: 48.09

GC content: 70.95

Gene sequence:

>1191_bases
ATGACCGTCCGCAGTTCCTTTCCGCCGCTCACGATCCGCGGCCGTCCCTTGCTGCCGATCGTGCAGGGCGGCATGGGCGT
CGGCATCTCCGCGCACCGGCTGGCCGGCAGCGTCGCGCACGAGGGCGCGCTCGGCACGATCGCGAGCATCGACCTGCGGC
ACCATCATGCGGATCTGCTCGCACGCTGTCGCGCGCAGCCGGACCGTGCGACGCTCGAAGCGGCGAACCTCGAGGCGCTC
GCGCGCGAGATCCGGCTGGCGAAGACGTACGCGCAAGGGCGCGGGATGATCGCGGTCAACGTGATGAAGGCCGTGAGCGC
GCATGCGGACTACGTCCGCGTGGCCTGCGACGAGGGTGCCGACGCGATCGTGATGGGCGCCGGCCTGCCGCTCGACTTGC
CCGATCTCGTGCAGGGCCGCGACATTGCGCTGATTCCGATCCTGTCGGACGGCCGCGGGATCGCGCTGGTGCTCAGGAAG
TGGATGAAGAAGGGCCGGCTGCCCGACGCAATCGTGATCGAGCATCCCGCGCATGCGGGCGGCCATCTCGGCGTCACGCA
GCTCGCCGACATGCACGATCCGCGTTTCGACTTCGCACGCGTGCTCGACGACGCCGCGCAGGCGATCGCGTCGCTCGGCA
TCGCCCGCGACGCGATTCCGCTGATCGTCGCGGGCGGCATCAACGGCCACGACGCGGTGCGCGCGGCGCTCGAGGCCGGC
GCGCAAGGCGTCCAGGTCGGCACGCCGTTCGCGGTGACCGAGGAGGGCGACGCGCATCCGAACTTCAAGCGCGTGCTCGC
CGATGCGACGCCGGACGACATCGTCGAATTCGTCAGCGTGACGGGCCTGCCCGCGCGCGCGGTCAGAACGCCGTGGCTCG
ACCGCTATCTGCGCAACGAGGCGCGCATCCGCGCGAAACTCGGCGCGCTGAAGCAGCGCTGCCCGACCGCGCTCGAATGC
CTGAGCGTATGCGGGCTGCGCGACGGCATCGAGCGGTTCGGGCATTTCTGCATCGATACGCGGCTCGCCGCCGCGCTGCG
CGGCGACGTCGCCAACGGCCTGTTCTTCCGCGGCCGCGAAGCGCTGCCGTTCGGCCGTGCGATCCGCAGCGTGCGCGATC
TGCTCGACCTGCTGCTGACCGGCCGCGCGGCGGAGCCTGCGACAAACCGTCCCACGTTTACGCTGGCTTGA

Upstream 100 bases:

>100_bases
GCGCGCACGCGTGCCGTCGTCGTTCGTTGACGGCCGTCAACGTGCGCGGCGGCCGATCGTCGATCATCGCGTTTCCGACG
ATGTTTCGACGAGGCTTCAG

Downstream 100 bases:

>100_bases
CCGACATCAAGATGCGCGAAAGACCCTACACGGAAAATGGAGATCATTATTCGGGGGTCCGTACCATGCATCAAACCAAT
GACACGATTCGAACACGCAT

Product: 2-nitropropane dioxygenase NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTVRSSFPPLTIRGRPLLPIVQGGMGVGISAHRLAGSVAHEGALGTIASIDLRHHHADLLARCRAQPDRATLEAANLEAL
AREIRLAKTYAQGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLVQGRDIALIPILSDGRGIALVLRK
WMKKGRLPDAIVIEHPAHAGGHLGVTQLADMHDPRFDFARVLDDAAQAIASLGIARDAIPLIVAGGINGHDAVRAALEAG
AQGVQVGTPFAVTEEGDAHPNFKRVLADATPDDIVEFVSVTGLPARAVRTPWLDRYLRNEARIRAKLGALKQRCPTALEC
LSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGRAAEPATNRPTFTLA

Sequences:

>Translated_396_residues
MTVRSSFPPLTIRGRPLLPIVQGGMGVGISAHRLAGSVAHEGALGTIASIDLRHHHADLLARCRAQPDRATLEAANLEAL
AREIRLAKTYAQGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLVQGRDIALIPILSDGRGIALVLRK
WMKKGRLPDAIVIEHPAHAGGHLGVTQLADMHDPRFDFARVLDDAAQAIASLGIARDAIPLIVAGGINGHDAVRAALEAG
AQGVQVGTPFAVTEEGDAHPNFKRVLADATPDDIVEFVSVTGLPARAVRTPWLDRYLRNEARIRAKLGALKQRCPTALEC
LSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGRAAEPATNRPTFTLA
>Mature_395_residues
TVRSSFPPLTIRGRPLLPIVQGGMGVGISAHRLAGSVAHEGALGTIASIDLRHHHADLLARCRAQPDRATLEAANLEALA
REIRLAKTYAQGRGMIAVNVMKAVSAHADYVRVACDEGADAIVMGAGLPLDLPDLVQGRDIALIPILSDGRGIALVLRKW
MKKGRLPDAIVIEHPAHAGGHLGVTQLADMHDPRFDFARVLDDAAQAIASLGIARDAIPLIVAGGINGHDAVRAALEAGA
QGVQVGTPFAVTEEGDAHPNFKRVLADATPDDIVEFVSVTGLPARAVRTPWLDRYLRNEARIRAKLGALKQRCPTALECL
SVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGREALPFGRAIRSVRDLLDLLLTGRAAEPATNRPTFTLA

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 42182; Mature: 42051

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRSSFPPLTIRGRPLLPIVQGGMGVGISAHRLAGSVAHEGALGTIASIDLRHHHADLL
CCCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHH
ARCRAQPDRATLEAANLEALAREIRLAKTYAQGRGMIAVNVMKAVSAHADYVRVACDEGA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCEEEEEECCCC
DAIVMGAGLPLDLPDLVQGRDIALIPILSDGRGIALVLRKWMKKGRLPDAIVIEHPAHAG
CEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
GHLGVTQLADMHDPRFDFARVLDDAAQAIASLGIARDAIPLIVAGGINGHDAVRAALEAG
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC
AQGVQVGTPFAVTEEGDAHPNFKRVLADATPDDIVEFVSVTGLPARAVRTPWLDRYLRNE
CCCEECCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
ARIRAKLGALKQRCPTALECLSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGRE
HHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
ALPFGRAIRSVRDLLDLLLTGRAAEPATNRPTFTLA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC
>Mature Secondary Structure 
TVRSSFPPLTIRGRPLLPIVQGGMGVGISAHRLAGSVAHEGALGTIASIDLRHHHADLL
CCCCCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHH
ARCRAQPDRATLEAANLEALAREIRLAKTYAQGRGMIAVNVMKAVSAHADYVRVACDEGA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCEEEEEECCCC
DAIVMGAGLPLDLPDLVQGRDIALIPILSDGRGIALVLRKWMKKGRLPDAIVIEHPAHAG
CEEEEECCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
GHLGVTQLADMHDPRFDFARVLDDAAQAIASLGIARDAIPLIVAGGINGHDAVRAALEAG
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC
AQGVQVGTPFAVTEEGDAHPNFKRVLADATPDDIVEFVSVTGLPARAVRTPWLDRYLRNE
CCCEECCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
ARIRAKLGALKQRCPTALECLSVCGLRDGIERFGHFCIDTRLAAALRGDVANGLFFRGRE
HHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
ALPFGRAIRSVRDLLDLLLTGRAAEPATNRPTFTLA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]