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The map label for this gene is ompW [C]

Identifier: 161524680

GI number: 161524680

Start: 1659646

End: 1660296

Strand: Direct

Name: ompW [C]

Synonym: Bmul_1507

Alternate gene names: 161524680

Gene position: 1659646-1660296 (Clockwise)

Preceding gene: 161524679

Following gene: 161524682

Centisome position: 48.13

GC content: 66.05

Gene sequence:

>651_bases
ATGCATCAAACCAATGACACGATTCGAACACGCATCATCGCCGCGGCCGTGGTGGCCGCGAGCGTCGCGCTGCCGTCGCT
CGCGCAGGCGGCGTCGCCCGGCGACGGCATTCATCAGGGCGACGTGCTCGTGCGGCTGCGCGCGATCAGCATCCAGCCGA
ACGAGCGCGGCAGCGACACGCTCGGCGCGCTGAACGTCGGCGTGAACAACGCGATCGTGCCGGAGCTCGACTTCACGTAC
ATGATCCGCGACTACCTGGGCGTCGAGCTGATCCTCGGCACGTCGCGGCATCAGGTGACGTCGAGCGCGGGCCATCTCGG
CGGCGTGAACGTGCTGCCGCCGACGCTGCTGCTGCAGTACCACTTCAATCATGCGGGCAAGGTGCGGCCGTACGTCGGCG
CGGGGCTGAACTACACGTACTTCTACAACAACGGGCTCAACGTCGGCGGCGAGGGCGTGTCGATCGGCAAGAGCAGCTTC
GGGCCGGCGCTGCAGTTCGGCGTGGACGTGCAGATGACGAAGCGCGTGTTCCTGAACGTCGACGTGAAGAAGATCTGGAT
GAGCACGGACGCGACGCTCGGCGACCGCGGCATCGGCACGCTGCATATCGATCCGCTGATCGTCGGCGTGGGTGTCGGGA
TGAAGTTCTAG

Upstream 100 bases:

>100_bases
CTGCGACAAACCGTCCCACGTTTACGCTGGCTTGACCGACATCAAGATGCGCGAAAGACCCTACACGGAAAATGGAGATC
ATTATTCGGGGGTCCGTACC

Downstream 100 bases:

>100_bases
CGCCGCACGCGGCACGAAACGAACGGAGTTGGGGTTCGCGGCATGGCAGTCGGCATGCCGCGTTTTTTTTGTGCGGCGCG
CGCTTACAGCTTGTCGTTGC

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MHQTNDTIRTRIIAAAVVAASVALPSLAQAASPGDGIHQGDVLVRLRAISIQPNERGSDTLGALNVGVNNAIVPELDFTY
MIRDYLGVELILGTSRHQVTSSAGHLGGVNVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSIGKSSF
GPALQFGVDVQMTKRVFLNVDVKKIWMSTDATLGDRGIGTLHIDPLIVGVGVGMKF

Sequences:

>Translated_216_residues
MHQTNDTIRTRIIAAAVVAASVALPSLAQAASPGDGIHQGDVLVRLRAISIQPNERGSDTLGALNVGVNNAIVPELDFTY
MIRDYLGVELILGTSRHQVTSSAGHLGGVNVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSIGKSSF
GPALQFGVDVQMTKRVFLNVDVKKIWMSTDATLGDRGIGTLHIDPLIVGVGVGMKF
>Mature_216_residues
MHQTNDTIRTRIIAAAVVAASVALPSLAQAASPGDGIHQGDVLVRLRAISIQPNERGSDTLGALNVGVNNAIVPELDFTY
MIRDYLGVELILGTSRHQVTSSAGHLGGVNVLPPTLLLQYHFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSIGKSSF
GPALQFGVDVQMTKRVFLNVDVKKIWMSTDATLGDRGIGTLHIDPLIVGVGVGMKF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=188, Percent_Identity=35.6382978723404, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22936; Mature: 22936

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQTNDTIRTRIIAAAVVAASVALPSLAQAASPGDGIHQGDVLVRLRAISIQPNERGSDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
LGALNVGVNNAIVPELDFTYMIRDYLGVELILGTSRHQVTSSAGHLGGVNVLPPTLLLQY
EEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCCCHHEEEEE
HFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSIGKSSFGPALQFGVDVQMTKRVFLNV
ECCCCCCCCCEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCEEECCCCEEEEEEEEEC
DVKKIWMSTDATLGDRGIGTLHIDPLIVGVGVGMKF
CHHEEEEECCCCCCCCCCEEEEECEEEEEECCCCCC
>Mature Secondary Structure
MHQTNDTIRTRIIAAAVVAASVALPSLAQAASPGDGIHQGDVLVRLRAISIQPNERGSDT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCC
LGALNVGVNNAIVPELDFTYMIRDYLGVELILGTSRHQVTSSAGHLGGVNVLPPTLLLQY
EEEEEECCCCCCCCCCCHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCCCCCCHHEEEEE
HFNHAGKVRPYVGAGLNYTYFYNNGLNVGGEGVSIGKSSFGPALQFGVDVQMTKRVFLNV
ECCCCCCCCCEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCEEECCCCEEEEEEEEEC
DVKKIWMSTDATLGDRGIGTLHIDPLIVGVGVGMKF
CHHEEEEECCCCCCCCCCEEEEECEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]