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The map label for this gene is ygeR [C]

Identifier: 161524625

GI number: 161524625

Start: 1598212

End: 1599090

Strand: Direct

Name: ygeR [C]

Synonym: Bmul_1452

Alternate gene names: 161524625

Gene position: 1598212-1599090 (Clockwise)

Preceding gene: 161524624

Following gene: 161524626

Centisome position: 46.35

GC content: 68.71

Gene sequence:

>879_bases
ATGAGTATGTTGCGCGCGATGCAAAACAACCGTTCCAGGGAACCGCTTACGCTCGCCCAGCGCGCGATCTGCGTGGCCGC
GTTCTCCACGTTACTGGCCGCCTGTGCGACGCGGCTCGACAACGCGCCCGTCGTCGACCGCTCCGGTTCGTTCGGCACGA
CGGCCGCCGCGCAGCCCGCGGTGCCGCTCGGCCCGCCGCCGCCCGGTTTCTACCGCGTGAAGCCGGGCGACACGCTGTAC
CGGATCGCACTCGAGAACGGACAGAACTATCGCGACATCGCCGCGTGGAACAATCTGTCGAACCCGAATCAGATCGAAGT
CGATCAGTTGCTGCGCGTCGTGCCGCCGGGCGGCGCCGCGGTGGCCGGTGCGCCGGCCACGGCACCGCTCGCGGGCGGCG
CGGTCGCGACGGCCCCGCTGAGCAGCGGCCCGGCGACGCCGGCGGCGAGTGCGCCGTCGGCCGTCACGCCGCCGCCCGCC
GCATCGAGCGACACGACGGCCGCGCCGAGCGGCCCGATCGCGTTCGCCTGGCCGGTGCGCGGCCCCGTGCTGAACGGTTT
CGACGACACGAAGAACAAGGGTGTCAACATCGGCGGCACGGCCGGCGAGGCCGTGAAGGCGGCGGCGGACGGCCGCGTCG
TCTACGCGGGCAACGGGCTGCGCGGCTACGGCAACCTCATTATCATCAAGCACGACGCGACTTACCTCACCGCGTATGCA
CACAATCGCGCTTTGATGGTAAAAGAGGGGGACGCGGTGACGAAGGGGCAGAAAATCGCCGAGATGGGTAACAGCGATGC
CGACCGCGTGATGCTGCATTTCGAGGTTCGCCGACAGGGTAAGCCTGTCGATCCGATGAAGTATCTGCCGCCTCAATAA

Upstream 100 bases:

>100_bases
TCCTCACGCTCGTCGAGCGCGTCGCGCACGCGCAGTGGCGGGAGTCTCGGCTTGATCGCGTTTTCTTTGTCCCTTTAAAA
TCCGGAGTGATTTGAAACCG

Downstream 100 bases:

>100_bases
CGGGACGACCATGCCGAAATCGAAGCGCCACGAGCCGCAAGCCGAGTCTGAGAAGATCAGTCGTGCCACGCAAGCATCGG
TGGATCGCGCTGGCGCTTCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSMLRAMQNNRSREPLTLAQRAICVAAFSTLLAACATRLDNAPVVDRSGSFGTTAAAQPAVPLGPPPPGFYRVKPGDTLY
RIALENGQNYRDIAAWNNLSNPNQIEVDQLLRVVPPGGAAVAGAPATAPLAGGAVATAPLSSGPATPAASAPSAVTPPPA
ASSDTTAAPSGPIAFAWPVRGPVLNGFDDTKNKGVNIGGTAGEAVKAAADGRVVYAGNGLRGYGNLIIIKHDATYLTAYA
HNRALMVKEGDAVTKGQKIAEMGNSDADRVMLHFEVRRQGKPVDPMKYLPPQ

Sequences:

>Translated_292_residues
MSMLRAMQNNRSREPLTLAQRAICVAAFSTLLAACATRLDNAPVVDRSGSFGTTAAAQPAVPLGPPPPGFYRVKPGDTLY
RIALENGQNYRDIAAWNNLSNPNQIEVDQLLRVVPPGGAAVAGAPATAPLAGGAVATAPLSSGPATPAASAPSAVTPPPA
ASSDTTAAPSGPIAFAWPVRGPVLNGFDDTKNKGVNIGGTAGEAVKAAADGRVVYAGNGLRGYGNLIIIKHDATYLTAYA
HNRALMVKEGDAVTKGQKIAEMGNSDADRVMLHFEVRRQGKPVDPMKYLPPQ
>Mature_291_residues
SMLRAMQNNRSREPLTLAQRAICVAAFSTLLAACATRLDNAPVVDRSGSFGTTAAAQPAVPLGPPPPGFYRVKPGDTLYR
IALENGQNYRDIAAWNNLSNPNQIEVDQLLRVVPPGGAAVAGAPATAPLAGGAVATAPLSSGPATPAASAPSAVTPPPAA
SSDTTAAPSGPIAFAWPVRGPVLNGFDDTKNKGVNIGGTAGEAVKAAADGRVVYAGNGLRGYGNLIIIKHDATYLTAYAH
NRALMVKEGDAVTKGQKIAEMGNSDADRVMLHFEVRRQGKPVDPMKYLPPQ

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=225, Percent_Identity=39.1111111111111, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789099, Length=265, Percent_Identity=36.2264150943396, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI87082297, Length=128, Percent_Identity=41.40625, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 30141; Mature: 30009

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLRAMQNNRSREPLTLAQRAICVAAFSTLLAACATRLDNAPVVDRSGSFGTTAAAQPA
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
VPLGPPPPGFYRVKPGDTLYRIALENGQNYRDIAAWNNLSNPNQIEVDQLLRVVPPGGAA
CCCCCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHCCCCCCCEECHHHHHEECCCCCCE
VAGAPATAPLAGGAVATAPLSSGPATPAASAPSAVTPPPAASSDTTAAPSGPIAFAWPVR
ECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
GPVLNGFDDTKNKGVNIGGTAGEAVKAAADGRVVYAGNGLRGYGNLIIIKHDATYLTAYA
CCCCCCCCCCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCEEEEEECCEEEEEEE
HNRALMVKEGDAVTKGQKIAEMGNSDADRVMLHFEVRRQGKPVDPMKYLPPQ
CCEEEEEECCCCHHCCHHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMLRAMQNNRSREPLTLAQRAICVAAFSTLLAACATRLDNAPVVDRSGSFGTTAAAQPA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
VPLGPPPPGFYRVKPGDTLYRIALENGQNYRDIAAWNNLSNPNQIEVDQLLRVVPPGGAA
CCCCCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHCCCCCCCEECHHHHHEECCCCCCE
VAGAPATAPLAGGAVATAPLSSGPATPAASAPSAVTPPPAASSDTTAAPSGPIAFAWPVR
ECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
GPVLNGFDDTKNKGVNIGGTAGEAVKAAADGRVVYAGNGLRGYGNLIIIKHDATYLTAYA
CCCCCCCCCCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCEEEEEECCEEEEEEE
HNRALMVKEGDAVTKGQKIAEMGNSDADRVMLHFEVRRQGKPVDPMKYLPPQ
CCEEEEEECCCCHHCCHHHHHCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7959068; 10984043 [H]