Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is pcm [H]
Identifier: 161524624
GI number: 161524624
Start: 1597277
End: 1598206
Strand: Direct
Name: pcm [H]
Synonym: Bmul_1451
Alternate gene names: 161524624
Gene position: 1597277-1598206 (Clockwise)
Preceding gene: 161524623
Following gene: 161524625
Centisome position: 46.32
GC content: 71.94
Gene sequence:
>930_bases ATGAGCGGCGAGCGCGCGAAGCGGTTCCCGCTCGCGCTCGAAGATCTCAAGCGAGCGCCACGCAAATCCGACGGGCGGCC CGGCGAACGCCATGCGCTCGCCGCATCGAAGTCCGCCGACGGTCCGGTCGCCGTGCCGAAGCCCGGCGCGGCGCGCGGCG TGCCGGCCGGCCTCGCTGCCGCGAAGCCCGCGACGGCGCCGAAGGCCACCGCACCGAAGCCGACGCTGCCGAAGCCTGCC GCACCGCGGCCGATCGCACCGAGCGCGGCGCCGGCCGGCGCGTTCGCGCTCACCTCGGAACGCGTGCGCGAGCGCATGGT CGAACGGTTGCGTGCGAACGGCGTCGCCGACGCGCGCGTGCTGGCGGCGATGGCGGCGGTGCCGCGCCACCTGTTCGTGG ATCCCGGCCTCGCGACGCAGGCCTACGAGGATTCCGCACTGCCGATCGGCCACCAGCAGACCATTTCGAAGCCGTCGGTC GTCGCGCGCATGATCGAGCTCGCGATGGCCGGCCGCTCCCTCGAGCGCGTCCTCGAAATCGGCACCGGCTGCGGCTATCA GGCCGCGGTGCTGAGCCACGTGGCGCGCGACGTGTATTCGATTGAACGCATCAAGCCGCTGTACGAGCGCGCGAAGCTGA ACCTGAGGCCGCTGCGCGTGCCGAACATCCGTCTGCACTACGGCGACGGGCGTGTCGGCCTGCCGTCCGCCGCCCCGTTC GATGCGATCGTGATCGCAGCCGCGGGGCTCGACGTGCCGCAGGCGCTGCTCGAGCAGCTCGCGATCGGCGGGCGCCTCAT CGCGCCGGTCGGTGCGCAGAGCGGGCAGCCGCAGGTCCTCACGCTCGTCGAGCGCGTCGCGCACGCGCAGTGGCGGGAGT CTCGGCTTGATCGCGTTTTCTTTGTCCCTTTAAAATCCGGAGTGATTTGA
Upstream 100 bases:
>100_bases CGAACGGGTTCGTCTCGATCACGCCGTTGCAGCTCGATCTCACGCACACGCAGATGCTGCCTGCGACGCGCGAATGGGCG CGCGCCGGAGGGCGGGCTTC
Downstream 100 bases:
>100_bases AACCGATGAGTATGTTGCGCGCGATGCAAAACAACCGTTCCAGGGAACCGCTTACGCTCGCCCAGCGCGCGATCTGCGTG GCCGCGTTCTCCACGTTACT
Product: protein-L-isoaspartate O-methyltransferase
Products: NA
Alternate protein names: L-isoaspartyl protein carboxyl methyltransferase; Protein L-isoaspartyl methyltransferase; Protein-beta-aspartate methyltransferase; PIMT [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSGERAKRFPLALEDLKRAPRKSDGRPGERHALAASKSADGPVAVPKPGAARGVPAGLAAAKPATAPKATAPKPTLPKPA APRPIAPSAAPAGAFALTSERVRERMVERLRANGVADARVLAAMAAVPRHLFVDPGLATQAYEDSALPIGHQQTISKPSV VARMIELAMAGRSLERVLEIGTGCGYQAAVLSHVARDVYSIERIKPLYERAKLNLRPLRVPNIRLHYGDGRVGLPSAAPF DAIVIAAAGLDVPQALLEQLAIGGRLIAPVGAQSGQPQVLTLVERVAHAQWRESRLDRVFFVPLKSGVI
Sequences:
>Translated_309_residues MSGERAKRFPLALEDLKRAPRKSDGRPGERHALAASKSADGPVAVPKPGAARGVPAGLAAAKPATAPKATAPKPTLPKPA APRPIAPSAAPAGAFALTSERVRERMVERLRANGVADARVLAAMAAVPRHLFVDPGLATQAYEDSALPIGHQQTISKPSV VARMIELAMAGRSLERVLEIGTGCGYQAAVLSHVARDVYSIERIKPLYERAKLNLRPLRVPNIRLHYGDGRVGLPSAAPF DAIVIAAAGLDVPQALLEQLAIGGRLIAPVGAQSGQPQVLTLVERVAHAQWRESRLDRVFFVPLKSGVI >Mature_308_residues SGERAKRFPLALEDLKRAPRKSDGRPGERHALAASKSADGPVAVPKPGAARGVPAGLAAAKPATAPKATAPKPTLPKPAA PRPIAPSAAPAGAFALTSERVRERMVERLRANGVADARVLAAMAAVPRHLFVDPGLATQAYEDSALPIGHQQTISKPSVV ARMIELAMAGRSLERVLEIGTGCGYQAAVLSHVARDVYSIERIKPLYERAKLNLRPLRVPNIRLHYGDGRVGLPSAAPFD AIVIAAAGLDVPQALLEQLAIGGRLIAPVGAQSGQPQVLTLVERVAHAQWRESRLDRVFFVPLKSGVI
Specific function: Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins [H]
COG id: COG2518
COG function: function code O; Protein-L-isoaspartate carboxylmethyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. L- isoaspartyl/D-aspartyl protein methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI226530908, Length=212, Percent_Identity=33.0188679245283, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1789100, Length=211, Percent_Identity=44.5497630331754, Blast_Score=156, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71983477, Length=223, Percent_Identity=32.2869955156951, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193207222, Length=219, Percent_Identity=31.5068493150685, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17981723, Length=217, Percent_Identity=32.7188940092166, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000682 [H]
Pfam domain/function: PF01135 PCMT [H]
EC number: =2.1.1.77 [H]
Molecular weight: Translated: 32614; Mature: 32483
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: PS01279 PCMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGERAKRFPLALEDLKRAPRKSDGRPGERHALAASKSADGPVAVPKPGAARGVPAGLAA CCCCCCHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHC AKPATAPKATAPKPTLPKPAAPRPIAPSAAPAGAFALTSERVRERMVERLRANGVADARV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LAAMAAVPRHLFVDPGLATQAYEDSALPIGHQQTISKPSVVARMIELAMAGRSLERVLEI HHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GTGCGYQAAVLSHVARDVYSIERIKPLYERAKLNLRPLRVPNIRLHYGDGRVGLPSAAPF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCCCCCCCCCCH DAIVIAAAGLDVPQALLEQLAIGGRLIAPVGAQSGQPQVLTLVERVAHAQWRESRLDRVF HHEEHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEE FVPLKSGVI EEECCCCCC >Mature Secondary Structure SGERAKRFPLALEDLKRAPRKSDGRPGERHALAASKSADGPVAVPKPGAARGVPAGLAA CCCCCHHCCCHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHC AKPATAPKATAPKPTLPKPAAPRPIAPSAAPAGAFALTSERVRERMVERLRANGVADARV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LAAMAAVPRHLFVDPGLATQAYEDSALPIGHQQTISKPSVVARMIELAMAGRSLERVLEI HHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH GTGCGYQAAVLSHVARDVYSIERIKPLYERAKLNLRPLRVPNIRLHYGDGRVGLPSAAPF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCCCCCCCCCCCH DAIVIAAAGLDVPQALLEQLAIGGRLIAPVGAQSGQPQVLTLVERVAHAQWRESRLDRVF HHEEHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEE FVPLKSGVI EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA