Click here to switch to the map view.

The map label for this gene is lolB [H]

Identifier: 161523695

GI number: 161523695

Start: 563801

End: 564421

Strand: Reverse

Name: lolB [H]

Synonym: Bmul_0515

Alternate gene names: 161523695

Gene position: 564421-563801 (Counterclockwise)

Preceding gene: 161523696

Following gene: 161523694

Centisome position: 16.37

GC content: 70.37

Gene sequence:

>621_bases
ATGCAGATGTTCCCGATGTTTTCCCTGTCTTCGCGCGCCTGTCGCGCGCTCGTGGCAGCCGGCGCGGCGCTCGCGCTCGC
CGGTTGCGCAAGCACGCCGCCGTCCGCGCAGGCGCCTGCCGGCGGCACGCTTCAGACGGCCGCGACGCACGCCTATCACG
GCCGCTTCGCGGTGCAGTACTACGACCGGCTCGGCAAGCAGCAGAACGTGTACGGCAATTTCGACTGGCAGGAGCACGGC
AACGACGTGTCGCTCGAGCTGCGCAGCCCGCTCGGCCAGACGCTCGCGATCGTGAAGTCGACGCCGCGTGCAGCGTCGCT
CGAACTGCCGAATCGCCAGCCGCAATATGCCGCGGACGTCGGCGAGCTGATGCAGAACACGCTCGGCTTCTCGCTGCCGC
TCGCGGGCCTGCGCTACTGGCTGCTGCCGACCCCCGCGCCCGCGACGCCGGCCGAGACCGAACGCGATCCGGCCGACGGC
ACGCGCCTGAAGCAGATCCGCCAGGACGGCTGGACGATCGACTACCTCGCCTACGCGGACGCACCGGCCACGGGCGTCAG
ACGCGTCAACCTCGTGCGCGCGACGCCGCCGCTCGACATCAAGCTCGTGCTCGATCAGTGA

Upstream 100 bases:

>100_bases
AGGACGACGCACGCTCCGCATGGCGCGCCGCGCAGAAGCTCGAGCCCGACAACGAAACGCTCGTACAGACGCTGAAACGC
TTCCAGATCAACGGTCTCTG

Downstream 100 bases:

>100_bases
GCACGCGCACCCGTTTCGATACCAGCATGACCGATTCGACCCGCTCGCTGCGCAACTGTCTTGCGCCCGCGAAACTCAAC
CTGTTCCTGCATATCACCGG

Product: outer membrane lipoprotein LolB

Products: 5-aminolevulinate; CoA; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MQMFPMFSLSSRACRALVAAGAALALAGCASTPPSAQAPAGGTLQTAATHAYHGRFAVQYYDRLGKQQNVYGNFDWQEHG
NDVSLELRSPLGQTLAIVKSTPRAASLELPNRQPQYAADVGELMQNTLGFSLPLAGLRYWLLPTPAPATPAETERDPADG
TRLKQIRQDGWTIDYLAYADAPATGVRRVNLVRATPPLDIKLVLDQ

Sequences:

>Translated_206_residues
MQMFPMFSLSSRACRALVAAGAALALAGCASTPPSAQAPAGGTLQTAATHAYHGRFAVQYYDRLGKQQNVYGNFDWQEHG
NDVSLELRSPLGQTLAIVKSTPRAASLELPNRQPQYAADVGELMQNTLGFSLPLAGLRYWLLPTPAPATPAETERDPADG
TRLKQIRQDGWTIDYLAYADAPATGVRRVNLVRATPPLDIKLVLDQ
>Mature_206_residues
MQMFPMFSLSSRACRALVAAGAALALAGCASTPPSAQAPAGGTLQTAATHAYHGRFAVQYYDRLGKQQNVYGNFDWQEHG
NDVSLELRSPLGQTLAIVKSTPRAASLELPNRQPQYAADVGELMQNTLGFSLPLAGLRYWLLPTPAPATPAETERDPADG
TRLKQIRQDGWTIDYLAYADAPATGVRRVNLVRATPPLDIKLVLDQ

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 22248; Mature: 22248

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMFPMFSLSSRACRALVAAGAALALAGCASTPPSAQAPAGGTLQTAATHAYHGRFAVQY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
YDRLGKQQNVYGNFDWQEHGNDVSLELRSPLGQTLAIVKSTPRAASLELPNRQPQYAADV
HHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCCEEEEHCCCCCCEEEECCCCCCHHHHHH
GELMQNTLGFSLPLAGLRYWLLPTPAPATPAETERDPADGTRLKQIRQDGWTIDYLAYAD
HHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECC
APATGVRRVNLVRATPPLDIKLVLDQ
CCCCCCEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MQMFPMFSLSSRACRALVAAGAALALAGCASTPPSAQAPAGGTLQTAATHAYHGRFAVQY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
YDRLGKQQNVYGNFDWQEHGNDVSLELRSPLGQTLAIVKSTPRAASLELPNRQPQYAADV
HHHCCCCCCCCCCCCHHHCCCEEEEEECCCCCCEEEEHCCCCCCEEEECCCCCCHHHHHH
GELMQNTLGFSLPLAGLRYWLLPTPAPATPAETERDPADGTRLKQIRQDGWTIDYLAYAD
HHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECC
APATGVRRVNLVRATPPLDIKLVLDQ
CCCCCCEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Succinyl-CoA; glycine [C]

Specific reaction: Succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [C]

General reaction: Acyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]