| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161523696
Identifier: 161523696
GI number: 161523696
Start: 564421
End: 566244
Strand: Reverse
Name: 161523696
Synonym: Bmul_0516
Alternate gene names: NA
Gene position: 566244-564421 (Counterclockwise)
Preceding gene: 161523699
Following gene: 161523695
Centisome position: 16.42
GC content: 68.26
Gene sequence:
>1824_bases ATGACCCTGCCCTCGAAGCTGCTTCTGAAGCGCCCCGCCGCCGCGGGCGGCACGCGCGCGTTCCCGGTCCGCCGCGCGCT TGGCGCGGCCTTGCTCGCCGTCTGGACCCTCACCGCCTTTCCGGCTCACGCGCAGGATCCGGCATCGGACGACGCGGAGT CGCAGGGTGCGTTCGATCACGTGATGCCGGACGAGAAGAAGGATCTTCCGGCCGTCCCGCTCACGAGCCAGATCGTCTAT CAGGTGCTCGCGGCCGAGGTCGCGCTTCAGCGCAATCAGCCGGCGCCCGCGTACCAGACCTATCTCGCGCTCGCGCGCGA CACGCGCGATCCGCGCATGGCGCAGCGCGCGACCGAAATCGCGCTCGGCGCGCAGAGCCCGGCCGATGCGTTGTCGGCCG CGAATCTCTGGCGCCAGTACGCGCCCGATTCGAATCGCGCATCGCAGGTCGACGCGGCGCTGCTCGTGCTCGCCGGCAAG CCGGCCGACGCGCAACCGATGCTCGCCCGCGAACTCGCGCGCGCGACCGGCGACACGCGCGGCCCGGCGATCCTCGCGCT GCAGGCGCTGCTCGCGCGCGGCGCCGACCGCGTCGGCGGCCTCGCGGTGCTGAAGGACATGCTCAAGAACGACATGAACC GGCCGGAGGCGCATCTCGCGATCGCGCGGCAGCAGCTCGCGGTCGACGACAAGGACGGCGCCGCGCAGTCGCTGCGACGC GCGCTGCAGATCCGCCCCGACTACCTGCCCGCCGCGCTGATGCTGTCGCAGATGGGGCCGGCGGAGCGTGCGGCCGGCAT CGCGTCGTTCGAGAAATACGTTCAGCAGAATCCGAAGTCGCGCGATGCGCGGCTCGCGCTGTCGCAACTATATCTGGCCG ACGATCGGCTCGACGATGCGCAAAAGCAGTTCGAAACGATGCGCAAGCTCGATTCGAAGGACCCGACGCCGCTGATGGCG CTCGCGCTGATCAAGATCCAGCAGAAAAAGCTCGACGATGCGACGGCCTACCTGAAGCAGTACGTGCAGCTCGGCGCGAA GCAGCCGGATCTCGACGTCGGCCAGGGTTACATCTATCTCGCGCAGATCGCGATCGAACAGGGTAACGACGCCCAGGCGT CGCAATGGCTCGACAAGGTCGACCAGACGAGCCAGCACTACCTGCCCGCGCAGATCACGCGTGCGCAACTGCTGCAGAAG CAGGGCAAGACCGACGAGGCGCGCAAGGTGCTCGACGATCTGCCCGTCACCGACCCGCGCGACGCGGCCGTGATCGCACG CACCGACGCGTCGATCCTGTTCACCGCGAAGCGCTACGCGGAAGCGGAGGCGCGGCTCTCGCGCGCGGTCGACGATTTCC CCGACGATCCGGACCTGCGCTACGACTACGCGATGGCGGCCGAGAAGACGGGCCACTACGCGGCGATGGAAAAGCAGCTG CGCGAGCTGATCCGCACGCAGCCCGACAATCCGCAGGCCTACAACGCACTCGGCTATTCGCTTGCCGATCGCAACCAGCG GCTGCCGGAAGCGAACAAGCTGATCGAGAAGGCGCTGTCGCTCGCGCCGAATGATGCGTACATCATGGACAGCCTCGGCT GGGTCAAGTACCGGATGGGCGATACGGCCGGCGCCGCGAAGATCCTGCGCCGCGCGTACGACCTGCAGCCAAACGCCGAA ATCGGCGCGCACCTCGGCGAAGTGCTGTGGAAGAGCGGCGCGCAGGACGACGCACGCTCCGCATGGCGCGCCGCGCAGAA GCTCGAGCCCGACAACGAAACGCTCGTACAGACGCTGAAACGCTTCCAGATCAACGGTCTCTGA
Upstream 100 bases:
>100_bases CAACTCTGGCATGTTTTGCGGGTCTGAAGCTGGATGATCACGATCGTGCGTGTATTGTAGCGAGCGCGATACAATCGGTT GAAACATCGAACGGATTTCC
Downstream 100 bases:
>100_bases TGCAGATGTTCCCGATGTTTTCCCTGTCTTCGCGCGCCTGTCGCGCGCTCGTGGCAGCCGGCGCGGCGCTCGCGCTCGCC GGTTGCGCAAGCACGCCGCC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTLPSKLLLKRPAAAGGTRAFPVRRALGAALLAVWTLTAFPAHAQDPASDDAESQGAFDHVMPDEKKDLPAVPLTSQIVY QVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEIALGAQSPADALSAANLWRQYAPDSNRASQVDAALLVLAGK PADAQPMLARELARATGDTRGPAILALQALLARGADRVGGLAVLKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRR ALQIRPDYLPAALMLSQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMA LALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQIAIEQGNDAQASQWLDKVDQTSQHYLPAQITRAQLLQK QGKTDEARKVLDDLPVTDPRDAAVIARTDASILFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEKTGHYAAMEKQL RELIRTQPDNPQAYNALGYSLADRNQRLPEANKLIEKALSLAPNDAYIMDSLGWVKYRMGDTAGAAKILRRAYDLQPNAE IGAHLGEVLWKSGAQDDARSAWRAAQKLEPDNETLVQTLKRFQINGL
Sequences:
>Translated_607_residues MTLPSKLLLKRPAAAGGTRAFPVRRALGAALLAVWTLTAFPAHAQDPASDDAESQGAFDHVMPDEKKDLPAVPLTSQIVY QVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEIALGAQSPADALSAANLWRQYAPDSNRASQVDAALLVLAGK PADAQPMLARELARATGDTRGPAILALQALLARGADRVGGLAVLKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRR ALQIRPDYLPAALMLSQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMA LALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQIAIEQGNDAQASQWLDKVDQTSQHYLPAQITRAQLLQK QGKTDEARKVLDDLPVTDPRDAAVIARTDASILFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEKTGHYAAMEKQL RELIRTQPDNPQAYNALGYSLADRNQRLPEANKLIEKALSLAPNDAYIMDSLGWVKYRMGDTAGAAKILRRAYDLQPNAE IGAHLGEVLWKSGAQDDARSAWRAAQKLEPDNETLVQTLKRFQINGL >Mature_606_residues TLPSKLLLKRPAAAGGTRAFPVRRALGAALLAVWTLTAFPAHAQDPASDDAESQGAFDHVMPDEKKDLPAVPLTSQIVYQ VLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEIALGAQSPADALSAANLWRQYAPDSNRASQVDAALLVLAGKP ADAQPMLARELARATGDTRGPAILALQALLARGADRVGGLAVLKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRRA LQIRPDYLPAALMLSQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDAQKQFETMRKLDSKDPTPLMAL ALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYLAQIAIEQGNDAQASQWLDKVDQTSQHYLPAQITRAQLLQKQ GKTDEARKVLDDLPVTDPRDAAVIARTDASILFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEKTGHYAAMEKQLR ELIRTQPDNPQAYNALGYSLADRNQRLPEANKLIEKALSLAPNDAYIMDSLGWVKYRMGDTAGAAKILRRAYDLQPNAEI GAHLGEVLWKSGAQDDARSAWRAAQKLEPDNETLVQTLKRFQINGL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 66580; Mature: 66449
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSKLLLKRPAAAGGTRAFPVRRALGAALLAVWTLTAFPAHAQDPASDDAESQGAFDH CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHH VMPDEKKDLPAVPLTSQIVYQVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH ALGAQSPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQPMLARELARATGDTR HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCC GPAILALQALLARGADRVGGLAVLKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ALQIRPDYLPAALMLSQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDA HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH QKQFETMRKLDSKDPTPLMALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AQIAIEQGNDAQASQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPVTDPR EEEHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC DAAVIARTDASILFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEKTGHYAAMEKQL CCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHH RELIRTQPDNPQAYNALGYSLADRNQRLPEANKLIEKALSLAPNDAYIMDSLGWVKYRMG HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHEEECC DTAGAAKILRRAYDLQPNAEIGAHLGEVLWKSGAQDDARSAWRAAQKLEPDNETLVQTLK CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RFQINGL HHHCCCC >Mature Secondary Structure TLPSKLLLKRPAAAGGTRAFPVRRALGAALLAVWTLTAFPAHAQDPASDDAESQGAFDH CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHH VMPDEKKDLPAVPLTSQIVYQVLAAEVALQRNQPAPAYQTYLALARDTRDPRMAQRATEI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH ALGAQSPADALSAANLWRQYAPDSNRASQVDAALLVLAGKPADAQPMLARELARATGDTR HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCC GPAILALQALLARGADRVGGLAVLKDMLKNDMNRPEAHLAIARQQLAVDDKDGAAQSLRR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH ALQIRPDYLPAALMLSQMGPAERAAGIASFEKYVQQNPKSRDARLALSQLYLADDRLDDA HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH QKQFETMRKLDSKDPTPLMALALIKIQQKKLDDATAYLKQYVQLGAKQPDLDVGQGYIYL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE AQIAIEQGNDAQASQWLDKVDQTSQHYLPAQITRAQLLQKQGKTDEARKVLDDLPVTDPR EEEHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC DAAVIARTDASILFTAKRYAEAEARLSRAVDDFPDDPDLRYDYAMAAEKTGHYAAMEKQL CCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHH RELIRTQPDNPQAYNALGYSLADRNQRLPEANKLIEKALSLAPNDAYIMDSLGWVKYRMG HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCHHEEECC DTAGAAKILRRAYDLQPNAEIGAHLGEVLWKSGAQDDARSAWRAAQKLEPDNETLVQTLK CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH RFQINGL HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]