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The map label for this gene is capD [H]

Identifier: 160902738

GI number: 160902738

Start: 1372693

End: 1373745

Strand: Direct

Name: capD [H]

Synonym: Pmob_1283

Alternate gene names: 160902738

Gene position: 1372693-1373745 (Clockwise)

Preceding gene: 160902737

Following gene: 160902739

Centisome position: 63.27

GC content: 36.09

Gene sequence:

>1053_bases
ATGTTGAAGGATAAAACTCTATTAGTTACAGGAGGAACAGGGACTTTTGGTAACGCAGTAGTTAGAAGGTTTTTGAATAC
AGATATTAAAGAAATCCGTATCTTTTCTCGTGATGAGAAAAAGCAAGACGATATGAGAAGATTCTATAAAAACGATAAAT
TAAAGTTTTTCATAGGCGATGTACGTGACATTCAAAGCGTTCGAAACGCCATGTATGGGGTAGATTACGTCTTTCAAGCT
GCCGCATTGAAACAAGTGCCTTCATGTGAGTTCTTCCCATTGGAAGCTGTTAAAACGAATATCTTAGGAACAGAAAATGT
GCTAACAGCTGCCATTGAATTTGGTGTTAAAAAAGTAGTTTGTTTATCAACGGATAAAGCGGTTTATCCAATAAACGCAA
TGGGGATGTCTAAAGCTCTCATGGAGAAGATATTCGTTGCAAAGTCTCGAACTGTCGAACCAGATAAGACATTAATTTGT
GGCACAAGATATGGAAACGTTATGGCTTCCCGAGGTTCAGTTATCCCACTGTTTGTGCAACAAATTAAAAATGGCAAACC
CCTTACAGTAACGAATCCTGACATGACGAGATTTTTAATGAGCATAGAAGAAGCTGTTGATCTGGTTTTATACGCTTTTC
AAAACGGTAATCAAGGAGATAGATTTGTTAAAAAATCACCTTCCGCAAAAATAGGAGACTTAGCCCAAGCAATGAAAGAG
ATCTTTGAAGTGGAAAACGAAATAAAAATAATTGGCACACGTCATGGAGAAAAGATGCATGAAACACTTCTTACAAAGGA
AGAACATCTTGTTTCTGAGGATTTAGGAGATTTCTACAGAATTCCAGCGGACACAAGAGATTTAAATTACGAAAAATACT
TTGAAAAAGGGACATCTGATTTATCAAAGTATGTTGATTATAGGTCTGATAACACAATTATTCTAAGCGTTGAACAAACA
AAAGAGAAGCTTCTTTCTTTAGATTATATACAAAAGGAACTAGAAGACTACAAAAATGGCGGAACTAAGCCAATAGTGAG
TGAAGGGTTTTAG

Upstream 100 bases:

>100_bases
AAAAGCTTTTGAAGATAAATATTCAAAAGAAGTCGCTTTAGAAAGTTATTTACGAGTTGTTGAAAATTTACTTTGATTAG
TTATAGAAAGGAGCTTTAAC

Downstream 100 bases:

>100_bases
TTAAAAGTTAAAATTAACTTTAAAAAATACAAATTAAAGGAAGAATATGAATGAATAAAATAATGACAATAGTTGGTACA
AGGCCTGAATTAATAAAACT

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLKDKTLLVTGGTGTFGNAVVRRFLNTDIKEIRIFSRDEKKQDDMRRFYKNDKLKFFIGDVRDIQSVRNAMYGVDYVFQA
AALKQVPSCEFFPLEAVKTNILGTENVLTAAIEFGVKKVVCLSTDKAVYPINAMGMSKALMEKIFVAKSRTVEPDKTLIC
GTRYGNVMASRGSVIPLFVQQIKNGKPLTVTNPDMTRFLMSIEEAVDLVLYAFQNGNQGDRFVKKSPSAKIGDLAQAMKE
IFEVENEIKIIGTRHGEKMHETLLTKEEHLVSEDLGDFYRIPADTRDLNYEKYFEKGTSDLSKYVDYRSDNTIILSVEQT
KEKLLSLDYIQKELEDYKNGGTKPIVSEGF

Sequences:

>Translated_350_residues
MLKDKTLLVTGGTGTFGNAVVRRFLNTDIKEIRIFSRDEKKQDDMRRFYKNDKLKFFIGDVRDIQSVRNAMYGVDYVFQA
AALKQVPSCEFFPLEAVKTNILGTENVLTAAIEFGVKKVVCLSTDKAVYPINAMGMSKALMEKIFVAKSRTVEPDKTLIC
GTRYGNVMASRGSVIPLFVQQIKNGKPLTVTNPDMTRFLMSIEEAVDLVLYAFQNGNQGDRFVKKSPSAKIGDLAQAMKE
IFEVENEIKIIGTRHGEKMHETLLTKEEHLVSEDLGDFYRIPADTRDLNYEKYFEKGTSDLSKYVDYRSDNTIILSVEQT
KEKLLSLDYIQKELEDYKNGGTKPIVSEGF
>Mature_350_residues
MLKDKTLLVTGGTGTFGNAVVRRFLNTDIKEIRIFSRDEKKQDDMRRFYKNDKLKFFIGDVRDIQSVRNAMYGVDYVFQA
AALKQVPSCEFFPLEAVKTNILGTENVLTAAIEFGVKKVVCLSTDKAVYPINAMGMSKALMEKIFVAKSRTVEPDKTLIC
GTRYGNVMASRGSVIPLFVQQIKNGKPLTVTNPDMTRFLMSIEEAVDLVLYAFQNGNQGDRFVKKSPSAKIGDLAQAMKE
IFEVENEIKIIGTRHGEKMHETLLTKEEHLVSEDLGDFYRIPADTRDLNYEKYFEKGTSDLSKYVDYRSDNTIILSVEQT
KEKLLSLDYIQKELEDYKNGGTKPIVSEGF

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 39654; Mature: 39654

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDKTLLVTGGTGTFGNAVVRRFLNTDIKEIRIFSRDEKKQDDMRRFYKNDKLKFFIGD
CCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHCCCCEEEEECC
VRDIQSVRNAMYGVDYVFQAAALKQVPSCEFFPLEAVKTNILGTENVLTAAIEFGVKKVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEE
CLSTDKAVYPINAMGMSKALMEKIFVAKSRTVEPDKTLICGTRYGNVMASRGSVIPLFVQ
EEECCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIKNGKPLTVTNPDMTRFLMSIEEAVDLVLYAFQNGNQGDRFVKKSPSAKIGDLAQAMKE
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHH
IFEVENEIKIIGTRHGEKMHETLLTKEEHLVSEDLGDFYRIPADTRDLNYEKYFEKGTSD
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCHHH
LSKYVDYRSDNTIILSVEQTKEKLLSLDYIQKELEDYKNGGTKPIVSEGF
HHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLKDKTLLVTGGTGTFGNAVVRRFLNTDIKEIRIFSRDEKKQDDMRRFYKNDKLKFFIGD
CCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHEECCCCCCHHHHHHHHHCCCCEEEEECC
VRDIQSVRNAMYGVDYVFQAAALKQVPSCEFFPLEAVKTNILGTENVLTAAIEFGVKKVV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEE
CLSTDKAVYPINAMGMSKALMEKIFVAKSRTVEPDKTLICGTRYGNVMASRGSVIPLFVQ
EEECCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCHHHHHH
QIKNGKPLTVTNPDMTRFLMSIEEAVDLVLYAFQNGNQGDRFVKKSPSAKIGDLAQAMKE
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHH
IFEVENEIKIIGTRHGEKMHETLLTKEEHLVSEDLGDFYRIPADTRDLNYEKYFEKGTSD
HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHCHHH
LSKYVDYRSDNTIILSVEQTKEKLLSLDYIQKELEDYKNGGTKPIVSEGF
HHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA