| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902559
Identifier: 160902559
GI number: 160902559
Start: 1175206
End: 1176147
Strand: Direct
Name: 160902559
Synonym: Pmob_1098
Alternate gene names: NA
Gene position: 1175206-1176147 (Clockwise)
Preceding gene: 160902558
Following gene: 160902560
Centisome position: 54.17
GC content: 35.03
Gene sequence:
>942_bases ATGAAAAAAGTATTAACAACTTTGGTTATTGTTTCTTTGTTCACATTTACTTTCGGCGTAAAGATTGGCATCACACAAAT TGTGGAACATCCAGCTTTAGATAAGATTTATCAGGGGATAATTGATTATCTTGAAGATTCGGGTGTAGATTTCGAGTATG AACATCAAAGCGCTCAAAATAGCTTTCAAAATGCGATAACTATAGCTAACAAATTCAAAACAGATGTAGATATAATAGTT GCAATAGCTACACCTTCCGCTCAAGCAGCTGCGACGGAAATAAAAGACAAACCTGTAGTATTCAGCGCCGTTACAGATCC ACTCAGTGCGGGTTTGATACCTAAATTCGGTAAAAATCCAGGAAATGTTGTTGGAATAAGTGATATGGTTCCTGTTGAAA CACATGTAAACCTCATGAGAACAATATTTCCTGATGCCAAAAATTTAGCGATACTTTACAATACCGGAGAAGCTAACTCG GTTTTTTTAGCAGATCAAACCAAGAAATTTGCACCTCAACTTGGATTCAATGTAATAGAAATTACAGGAACGAACGCCAA CGAACTTGTTACTTCCTTAAACGCTCAAGCGAACAGGATAGATGTTGCCTATTTATACACAGATAATTTGGTTGCTTCAT CTGCCGAAATCTTAGGCCAAGTATTTGAAAAAAATAAAATTCCTGTAGTTGCTGGAGATATTGATATAGCAAAAAAAACA TCTGTTTTAGGTTTTGGCTTTGACTATTATCAAGTAGGAATAGAGACAGGAAAAATTGTTTTTGATCTCATAAACGGTAA AAAACCTTACGAAATTGAGTCAAGGATATTAAGTGCAGACTCACTAACGTTTTATATAAATTTGGACAGAGCCCGAGCCC TAAATGTAAACATACCTCAACAATTTATAGATATTGCAGATGAAATAGTAGATACACTATGA
Upstream 100 bases:
>100_bases CAAGTAGGTATAAGAAGAACAAATTGGGTGTCTACGAAAAAGTAGACACCTTTTTTTTAATAAAACACAAAAAAACAAAA TCTCCAGGAGGTGTGAGGGT
Downstream 100 bases:
>100_bases TCTGGAAAGAATTTTAGGAGGAAAATTATGGATTTAGTAGGTATATTAGAACAAGGATTAATAGCCTCCCTAGTTGCAAT GGGTGTGTTTATAAGTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; Permease; Permease Protein; ABC-Type Transporter Periplasmic Component; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter; ABC Transporter Periplasmic Component
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKKVLTTLVIVSLFTFTFGVKIGITQIVEHPALDKIYQGIIDYLEDSGVDFEYEHQSAQNSFQNAITIANKFKTDVDIIV AIATPSAQAAATEIKDKPVVFSAVTDPLSAGLIPKFGKNPGNVVGISDMVPVETHVNLMRTIFPDAKNLAILYNTGEANS VFLADQTKKFAPQLGFNVIEITGTNANELVTSLNAQANRIDVAYLYTDNLVASSAEILGQVFEKNKIPVVAGDIDIAKKT SVLGFGFDYYQVGIETGKIVFDLINGKKPYEIESRILSADSLTFYINLDRARALNVNIPQQFIDIADEIVDTL
Sequences:
>Translated_313_residues MKKVLTTLVIVSLFTFTFGVKIGITQIVEHPALDKIYQGIIDYLEDSGVDFEYEHQSAQNSFQNAITIANKFKTDVDIIV AIATPSAQAAATEIKDKPVVFSAVTDPLSAGLIPKFGKNPGNVVGISDMVPVETHVNLMRTIFPDAKNLAILYNTGEANS VFLADQTKKFAPQLGFNVIEITGTNANELVTSLNAQANRIDVAYLYTDNLVASSAEILGQVFEKNKIPVVAGDIDIAKKT SVLGFGFDYYQVGIETGKIVFDLINGKKPYEIESRILSADSLTFYINLDRARALNVNIPQQFIDIADEIVDTL >Mature_313_residues MKKVLTTLVIVSLFTFTFGVKIGITQIVEHPALDKIYQGIIDYLEDSGVDFEYEHQSAQNSFQNAITIANKFKTDVDIIV AIATPSAQAAATEIKDKPVVFSAVTDPLSAGLIPKFGKNPGNVVGISDMVPVETHVNLMRTIFPDAKNLAILYNTGEANS VFLADQTKKFAPQLGFNVIEITGTNANELVTSLNAQANRIDVAYLYTDNLVASSAEILGQVFEKNKIPVVAGDIDIAKKT SVLGFGFDYYQVGIETGKIVFDLINGKKPYEIESRILSADSLTFYINLDRARALNVNIPQQFIDIADEIVDTL
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34174; Mature: 34174
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLTTLVIVSLFTFTFGVKIGITQIVEHPALDKIYQGIIDYLEDSGVDFEYEHQSAQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHH SFQNAITIANKFKTDVDIIVAIATPSAQAAATEIKDKPVVFSAVTDPLSAGLIPKFGKNP HHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEECCCCHHCCCCCCCCCCC GNVVGISDMVPVETHVNLMRTIFPDAKNLAILYNTGEANSVFLADQTKKFAPQLGFNVIE CCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCEEEE ITGTNANELVTSLNAQANRIDVAYLYTDNLVASSAEILGQVFEKNKIPVVAGDIDIAKKT EECCCHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC SVLGFGFDYYQVGIETGKIVFDLINGKKPYEIESRILSADSLTFYINLDRARALNVNIPQ EEEEECCCCEEEECCCCEEEEEEECCCCCCCHHHHEECCCCEEEEEEECCCEEEECCCCH QFIDIADEIVDTL HHHHHHHHHHHCC >Mature Secondary Structure MKKVLTTLVIVSLFTFTFGVKIGITQIVEHPALDKIYQGIIDYLEDSGVDFEYEHQSAQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHH SFQNAITIANKFKTDVDIIVAIATPSAQAAATEIKDKPVVFSAVTDPLSAGLIPKFGKNP HHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCEEEEECCCCHHCCCCCCCCCCC GNVVGISDMVPVETHVNLMRTIFPDAKNLAILYNTGEANSVFLADQTKKFAPQLGFNVIE CCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHCCEEEE ITGTNANELVTSLNAQANRIDVAYLYTDNLVASSAEILGQVFEKNKIPVVAGDIDIAKKT EECCCHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC SVLGFGFDYYQVGIETGKIVFDLINGKKPYEIESRILSADSLTFYINLDRARALNVNIPQ EEEEECCCCEEEECCCCEEEEEEECCCCCCCHHHHEECCCCEEEEEEECCCEEEECCCCH QFIDIADEIVDTL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA