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The map label for this gene is tmk [H]

Identifier: 160902557

GI number: 160902557

Start: 1172737

End: 1173435

Strand: Direct

Name: tmk [H]

Synonym: Pmob_1096

Alternate gene names: 160902557

Gene position: 1172737-1173435 (Clockwise)

Preceding gene: 160902556

Following gene: 160902558

Centisome position: 54.05

GC content: 30.47

Gene sequence:

>699_bases
ATGAAAAAAGGAATGCTTATTGTAATAGAATCTGGGACAGACGCAAGTGGCAAAGCAACACAAGCAGAAATATTATCACA
AAGATTAAAAGATGAAAAAATTAAGGCATACAAAGTTGAATTTCCAAATTACAAAAGTGACTCTTCCGCTTTGATAAAAA
TGTATTTAAAAGGTGAATTTGGGGAAAACCCTGAAGCAATAAATCCATACGCTGCTTCCACATTTTTTGCCGTGGACCGA
TTCGCAACTTATCAAAAAGAATTGAAACCCTTATATGAATCTGGTGGAATTTTAATATCCGATAGGTACACAACCTCCAA
CATGATATATCAATCTTCAAAATTCGAAAATCAAAGTGAAAAAGATGAATTTTTGGAATGGCTTTGGGATTTGGAATTCA
ACAAATTTAATTTGCCAAAACCTAATTACGTAATATTTTTAGATATTCCTCCCAAAATAAGTATAGAATTGCTGAGAAAA
AGAAAGGAAAAAATAATAGACCTAACAGGAAAAGATATCCATGAAAAAAATATTGAGTACATAAACAAGACATACGAAAA
TGCAAAATATATCGCCCAGAAGTACAATTGGACAATAATAAACTGTTTAAAAGAAAACGAAGAATTAAAATCAATCGAAG
AAATTCACGAAGAGATCTACTCTATATGGAAACAAATAAGAGATTTAGGAGAAATATAA

Upstream 100 bases:

>100_bases
TTGGCTTTAGGAGCGGCTGTGGGAATAATTTTTAAGTTTTAACTTGGTAAATTGGTTAAATAACTTTGGTACAAGCACCT
AAACGGTAGGAGGATATTTT

Downstream 100 bases:

>100_bases
AATGGCCTTTGCTATAATTTTCAAATTTGGATTTTGGACTTTTTTTGTATTAATATATGCATTTGTTGCTACGACTGTTA
TCATCTTGGAAAGAAAAAGA

Product: thymidylate kinase

Products: NA

Alternate protein names: dTMP kinase [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEFGENPEAINPYAASTFFAVDR
FATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRK
RKEKIIDLTGKDIHEKNIEYINKTYENAKYIAQKYNWTIINCLKENEELKSIEEIHEEIYSIWKQIRDLGEI

Sequences:

>Translated_232_residues
MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEFGENPEAINPYAASTFFAVDR
FATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRK
RKEKIIDLTGKDIHEKNIEYINKTYENAKYIAQKYNWTIINCLKENEELKSIEEIHEEIYSIWKQIRDLGEI
>Mature_232_residues
MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEFGENPEAINPYAASTFFAVDR
FATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRK
RKEKIIDLTGKDIHEKNIEYINKTYENAKYIAQKYNWTIINCLKENEELKSIEEIHEEIYSIWKQIRDLGEI

Specific function: Unknown

COG id: COG0125

COG function: function code F; Thymidylate kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidylate kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018095
- InterPro:   IPR018094 [H]

Pfam domain/function: PF02223 Thymidylate_kin [H]

EC number: =2.7.4.9 [H]

Molecular weight: Translated: 27242; Mature: 27242

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEF
CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHEEEEECCCC
GENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEECCCCCCCCH
KDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKRKEKIIDLTGKDIHEKNIEY
HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
INKTYENAKYIAQKYNWTIINCLKENEELKSIEEIHEEIYSIWKQIRDLGEI
HHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEF
CCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHEEEEECCCC
GENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHEEECCCCCCCCH
KDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKRKEKIIDLTGKDIHEKNIEY
HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
INKTYENAKYIAQKYNWTIINCLKENEELKSIEEIHEEIYSIWKQIRDLGEI
HHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA