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The map label for this gene is araQ [H]

Identifier: 160902420

GI number: 160902420

Start: 1015865

End: 1016698

Strand: Direct

Name: araQ [H]

Synonym: Pmob_0956

Alternate gene names: 160902420

Gene position: 1015865-1016698 (Clockwise)

Preceding gene: 160902419

Following gene: 160902421

Centisome position: 46.82

GC content: 35.01

Gene sequence:

>834_bases
ATGAGATCGAGAAAAGTTTCTCCCATAGAGCAAGTCGCCGTGCATGGAATATTGATTATTTGGCTATTAATTTCAGTTAT
ACCTTTTGTATGGATGGTTTCGACTTCTTTTAAAGGCCCTGGAGAAATTTATATATTTCCTCCAAGATGGATCCCCAGAA
ATCCTACTTTTGATAATTATATAGATTTATTTCAAGAAATGAATTTTGGAAGGCCATTTTTGAACTCCGTTATTGTGTCT
CTTTCTACAACATTTTTATCGGTTTTAGTAGCTACTATGGCAGGTTATGGCTTTGCTAAATTCCATTTTAAAAATAAAAA
TTTACTGTTTTTGTTCATCTTGGGAACGATAATGGTACCGGGTCATATAACTATGATTCCAGTATTTTTATTGTTGTCAC
AGTTGAATCTGTTGAACACCTATTTGGGGTTAATATTACCAGCTATAGCAAACGCCTTCAACATATTTTTCATGAGACAA
TACATTATGGGCATACCTGATGAACTAATAGAAGCGGCTAAAATGGATGGGGCACATGAAGGATGGATCTTTTTTAGAGT
AATTTTACCTTTAGCTAGGCCAGCCATGGCAGCAATAACTATTTTCACTTTTACGGGTGCTTGGAACAGTTTTTTATGGC
CATTAATTCTAGCGACTGATGAAAGCATGTACACACTTCCAGTTGCTGTATCTGTATTACAAGGACAGTATGGTGAAAAC
ATAGCAATGCAAATGGCCGGTTCAGTTATTGTAATTTTACCTCTTATCATCGTATTTTTATTCACTCAGCGATATTTCAT
AAAAGGAATTACATTTACCGGTATGAAAGGCTAA

Upstream 100 bases:

>100_bases
TTGCCTTCGTGCTATTTTTAATAATATTTGCCTTAACCTATATACAAATGAGGGCAAGAAGATCAGAAGTATAAAAGAGT
ATTGGTGAGGAGTGATAATA

Downstream 100 bases:

>100_bases
AGTGAAATGACCAGATTTATAATATTATTCAAATCTTGTTAATAAATTACCTGTATAATAAAAGGGACTAAATTTATCCA
AATAACATTTTTGAAATAAC

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRSRKVSPIEQVAVHGILIIWLLISVIPFVWMVSTSFKGPGEIYIFPPRWIPRNPTFDNYIDLFQEMNFGRPFLNSVIVS
LSTTFLSVLVATMAGYGFAKFHFKNKNLLFLFILGTIMVPGHITMIPVFLLLSQLNLLNTYLGLILPAIANAFNIFFMRQ
YIMGIPDELIEAAKMDGAHEGWIFFRVILPLARPAMAAITIFTFTGAWNSFLWPLILATDESMYTLPVAVSVLQGQYGEN
IAMQMAGSVIVILPLIIVFLFTQRYFIKGITFTGMKG

Sequences:

>Translated_277_residues
MRSRKVSPIEQVAVHGILIIWLLISVIPFVWMVSTSFKGPGEIYIFPPRWIPRNPTFDNYIDLFQEMNFGRPFLNSVIVS
LSTTFLSVLVATMAGYGFAKFHFKNKNLLFLFILGTIMVPGHITMIPVFLLLSQLNLLNTYLGLILPAIANAFNIFFMRQ
YIMGIPDELIEAAKMDGAHEGWIFFRVILPLARPAMAAITIFTFTGAWNSFLWPLILATDESMYTLPVAVSVLQGQYGEN
IAMQMAGSVIVILPLIIVFLFTQRYFIKGITFTGMKG
>Mature_277_residues
MRSRKVSPIEQVAVHGILIIWLLISVIPFVWMVSTSFKGPGEIYIFPPRWIPRNPTFDNYIDLFQEMNFGRPFLNSVIVS
LSTTFLSVLVATMAGYGFAKFHFKNKNLLFLFILGTIMVPGHITMIPVFLLLSQLNLLNTYLGLILPAIANAFNIFFMRQ
YIMGIPDELIEAAKMDGAHEGWIFFRVILPLARPAMAAITIFTFTGAWNSFLWPLILATDESMYTLPVAVSVLQGQYGEN
IAMQMAGSVIVILPLIIVFLFTQRYFIKGITFTGMKG

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=29.0909090909091, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789860, Length=264, Percent_Identity=28.030303030303, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=30, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31248; Mature: 31248

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRKVSPIEQVAVHGILIIWLLISVIPFVWMVSTSFKGPGEIYIFPPRWIPRNPTFDNY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHH
IDLFQEMNFGRPFLNSVIVSLSTTFLSVLVATMAGYGFAKFHFKNKNLLFLFILGTIMVP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHCC
GHITMIPVFLLLSQLNLLNTYLGLILPAIANAFNIFFMRQYIMGIPDELIEAAKMDGAHE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
GWIFFRVILPLARPAMAAITIFTFTGAWNSFLWPLILATDESMYTLPVAVSVLQGQYGEN
CHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCC
IAMQMAGSVIVILPLIIVFLFTQRYFIKGITFTGMKG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEECCCCC
>Mature Secondary Structure
MRSRKVSPIEQVAVHGILIIWLLISVIPFVWMVSTSFKGPGEIYIFPPRWIPRNPTFDNY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHH
IDLFQEMNFGRPFLNSVIVSLSTTFLSVLVATMAGYGFAKFHFKNKNLLFLFILGTIMVP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHCC
GHITMIPVFLLLSQLNLLNTYLGLILPAIANAFNIFFMRQYIMGIPDELIEAAKMDGAHE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
GWIFFRVILPLARPAMAAITIFTFTGAWNSFLWPLILATDESMYTLPVAVSVLQGQYGEN
CHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCC
IAMQMAGSVIVILPLIIVFLFTQRYFIKGITFTGMKG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]