Click here to switch to the map view.

The map label for this gene is xynC [H]

Identifier: 160902421

GI number: 160902421

Start: 1016912

End: 1017709

Strand: Direct

Name: xynC [H]

Synonym: Pmob_0957

Alternate gene names: 160902421

Gene position: 1016912-1017709 (Clockwise)

Preceding gene: 160902420

Following gene: 160902422

Centisome position: 46.87

GC content: 36.97

Gene sequence:

>798_bases
ATGGCTTTACTAGAGGTAAACTTTATGTCGAGGTCATTAATGAGGAAAGTACCAATTATGGTGGTCCTACCAATGGATAA
AGCGAATCTTTCAGGTAAGTCTGAAATCACAGACAATGACAATAATACTTTCAAAACACTATATCTTCTTCATGGAATAT
TCGGTAATTATTCTGACTGGGTATCAGAAACAAGAATTCAAAGATTGGCTGAGGGAAGGAATCTGGCTGTTGTAATGCCT
TCTGGTGAGAATTCGTTTTATCTGGACCAACCAGAATCTGGAAATTTTTATGGTGAATTTATAGGAAGAGAACTTGTTAA
TATCACCAGAAAAATGTTTCCTTTGTCAAGAAAAAAAGAGGATACTTTTATTGCAGGACTTTCTATGGGAGGTTACGGTG
CCATTAGAAATGGCCTAAAATACCATGAAACTTTTGGCTGTGTTGCTGGACTTTCCAGTGCTTTGAATTTTGAGCAAATG
CTTGATGAATCATATCAAGTGATTGCTTGTAAGAAGAGCGCCTTCGGAGATCCTAAGGAAGCTATTTTGTCAGATAAGAA
TCCAAAGGTTCTTGTGAAGAATATCAAAGAAAATCCATTGGGCCAGTTCCCTAAAATGTATATGGCTTGTGGCACCGAAG
ATAATTTAATAAACTCTAACCGTGATTTCAGGGATTTTCTTATTGAAAACAATGTGGATTTAACTTATGAAGAAGGGCCA
GGTGCACATACGTGGGAATTTTGGGATACTTACATCGAAAAAGTGCTTGACTGGCTTCCATTGAAAAAACCTTCGTAA

Upstream 100 bases:

>100_bases
AACGAATTGTAGAATAAGTTCATAGGAGAAGAAAGAAACCTAAAATATTGAACAAATATTCCAATAAAAGAAGCAGAATT
TGATTTTAAGGAGAGATATT

Downstream 100 bases:

>100_bases
AGGAATATAAAAATAAAAAAAGCTATAAAAAAAATTATTAACAATTGAAATCTAAGATCCACTGGTTATATGAAAAATTG
GATCCTCCCATTAAAAAAGA

Product: putative esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MALLEVNFMSRSLMRKVPIMVVLPMDKANLSGKSEITDNDNNTFKTLYLLHGIFGNYSDWVSETRIQRLAEGRNLAVVMP
SGENSFYLDQPESGNFYGEFIGRELVNITRKMFPLSRKKEDTFIAGLSMGGYGAIRNGLKYHETFGCVAGLSSALNFEQM
LDESYQVIACKKSAFGDPKEAILSDKNPKVLVKNIKENPLGQFPKMYMACGTEDNLINSNRDFRDFLIENNVDLTYEEGP
GAHTWEFWDTYIEKVLDWLPLKKPS

Sequences:

>Translated_265_residues
MALLEVNFMSRSLMRKVPIMVVLPMDKANLSGKSEITDNDNNTFKTLYLLHGIFGNYSDWVSETRIQRLAEGRNLAVVMP
SGENSFYLDQPESGNFYGEFIGRELVNITRKMFPLSRKKEDTFIAGLSMGGYGAIRNGLKYHETFGCVAGLSSALNFEQM
LDESYQVIACKKSAFGDPKEAILSDKNPKVLVKNIKENPLGQFPKMYMACGTEDNLINSNRDFRDFLIENNVDLTYEEGP
GAHTWEFWDTYIEKVLDWLPLKKPS
>Mature_264_residues
ALLEVNFMSRSLMRKVPIMVVLPMDKANLSGKSEITDNDNNTFKTLYLLHGIFGNYSDWVSETRIQRLAEGRNLAVVMPS
GENSFYLDQPESGNFYGEFIGRELVNITRKMFPLSRKKEDTFIAGLSMGGYGAIRNGLKYHETFGCVAGLSSALNFEQML
DESYQVIACKKSAFGDPKEAILSDKNPKVLVKNIKENPLGQFPKMYMACGTEDNLINSNRDFRDFLIENNVDLTYEEGPG
AHTWEFWDTYIEKVLDWLPLKKPS

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30089; Mature: 29958

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLEVNFMSRSLMRKVPIMVVLPMDKANLSGKSEITDNDNNTFKTLYLLHGIFGNYSDW
CEEEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
VSETRIQRLAEGRNLAVVMPSGENSFYLDQPESGNFYGEFIGRELVNITRKMFPLSRKKE
HHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DTFIAGLSMGGYGAIRNGLKYHETFGCVAGLSSALNFEQMLDESYQVIACKKSAFGDPKE
CCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCCHHH
AILSDKNPKVLVKNIKENPLGQFPKMYMACGTEDNLINSNRDFRDFLIENNVDLTYEEGP
HHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC
GAHTWEFWDTYIEKVLDWLPLKKPS
CCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALLEVNFMSRSLMRKVPIMVVLPMDKANLSGKSEITDNDNNTFKTLYLLHGIFGNYSDW
EEEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
VSETRIQRLAEGRNLAVVMPSGENSFYLDQPESGNFYGEFIGRELVNITRKMFPLSRKKE
HHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DTFIAGLSMGGYGAIRNGLKYHETFGCVAGLSSALNFEQMLDESYQVIACKKSAFGDPKE
CCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCCHHH
AILSDKNPKVLVKNIKENPLGQFPKMYMACGTEDNLINSNRDFRDFLIENNVDLTYEEGP
HHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCCC
GAHTWEFWDTYIEKVLDWLPLKKPS
CCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]