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The map label for this gene is yurN [H]

Identifier: 160902419

GI number: 160902419

Start: 1014963

End: 1015838

Strand: Direct

Name: yurN [H]

Synonym: Pmob_0955

Alternate gene names: 160902419

Gene position: 1014963-1015838 (Clockwise)

Preceding gene: 160902418

Following gene: 160902420

Centisome position: 46.78

GC content: 35.62

Gene sequence:

>876_bases
TTGAAGACCCCAATAAGAGCAATTATCGGTTTCATAGGACCTTCAATAATATTATTGTTGATCTTCATGTTAATACCTAT
AGTAGTTTCTTTGGTGATAAGCTTCACTGATTTCGACGTTTATGCTATATATAATTGGGGAAATGCTAGTTTTATAGGCT
TTGAAAATTATGTAAACTTAATGCATGACCCTCTTTTTTGGAGGGCATTACTAAATACGCTGTATGCATTAGTTGTTGCA
ATGCCAATAACGATAGTTTTGTCTTTAAGTTTTGCTGCCCTTATAAACAGGGAAGCTACGTATTTTAAGAATTTTTTTAA
AGTGAGTTTTTATCTACCTTCCATAACAAATACTGTCGCAATTGCTATCGTATGGGCTTGGATGCTCAATCCTGATTACG
GATTATTAAATTGGTTTCTAGGTTTGTTTGGAATACAAGGTCCTAATTGGTTGGGTGATCCCCTTTGGGCAATGCCGTCG
GTAATAATGCTTGTAGTTTGGAAAGCAGTTGGTTACAACATTATTCTCTTCACGGCGGGTTTACAAAATATACCAGACTA
TCTATACGAAGCCGCCGAATTGGATGGTGCTTCAAGATTCCAACAATTTTTGCATGTGACAATACCATCGTTGAGGCCAA
CAATATTTTTCGTTACAGTTATGACTGTAATAGGTTATTTGCAATTATTTGAGGAACCATATATGCTAACTTCAGGCGGA
CCTTTGAATGCTACTTTATCTATAGTTCTCTATCTATATAGGCAGGGCTTTGAGTTCTTCAAATTAGGGTATTCCTCTTC
GATTGCCTTCGTGCTATTTTTAATAATATTTGCCTTAACCTATATACAAATGAGGGCAAGAAGATCAGAAGTATAA

Upstream 100 bases:

>100_bases
GAAATTGAAAAGATACTGAAATAATTTGTTTCATGCCCCTCTTTTTATGCAAAAAGAGGGGCTTTGATCAAAACTTTTTG
ATTATCGAGGAGAGATAAAA

Downstream 100 bases:

>100_bases
AAGAGTATTGGTGAGGAGTGATAATAATGAGATCGAGAAAAGTTTCTCCCATAGAGCAAGTCGCCGTGCATGGAATATTG
ATTATTTGGCTATTAATTTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKTPIRAIIGFIGPSIILLLIFMLIPIVVSLVISFTDFDVYAIYNWGNASFIGFENYVNLMHDPLFWRALLNTLYALVVA
MPITIVLSLSFAALINREATYFKNFFKVSFYLPSITNTVAIAIVWAWMLNPDYGLLNWFLGLFGIQGPNWLGDPLWAMPS
VIMLVVWKAVGYNIILFTAGLQNIPDYLYEAAELDGASRFQQFLHVTIPSLRPTIFFVTVMTVIGYLQLFEEPYMLTSGG
PLNATLSIVLYLYRQGFEFFKLGYSSSIAFVLFLIIFALTYIQMRARRSEV

Sequences:

>Translated_291_residues
MKTPIRAIIGFIGPSIILLLIFMLIPIVVSLVISFTDFDVYAIYNWGNASFIGFENYVNLMHDPLFWRALLNTLYALVVA
MPITIVLSLSFAALINREATYFKNFFKVSFYLPSITNTVAIAIVWAWMLNPDYGLLNWFLGLFGIQGPNWLGDPLWAMPS
VIMLVVWKAVGYNIILFTAGLQNIPDYLYEAAELDGASRFQQFLHVTIPSLRPTIFFVTVMTVIGYLQLFEEPYMLTSGG
PLNATLSIVLYLYRQGFEFFKLGYSSSIAFVLFLIIFALTYIQMRARRSEV
>Mature_291_residues
MKTPIRAIIGFIGPSIILLLIFMLIPIVVSLVISFTDFDVYAIYNWGNASFIGFENYVNLMHDPLFWRALLNTLYALVVA
MPITIVLSLSFAALINREATYFKNFFKVSFYLPSITNTVAIAIVWAWMLNPDYGLLNWFLGLFGIQGPNWLGDPLWAMPS
VIMLVVWKAVGYNIILFTAGLQNIPDYLYEAAELDGASRFQQFLHVTIPSLRPTIFFVTVMTVIGYLQLFEEPYMLTSGG
PLNATLSIVLYLYRQGFEFFKLGYSSSIAFVLFLIIFALTYIQMRARRSEV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=281, Percent_Identity=30.2491103202847, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=33.0508474576271, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1790465, Length=272, Percent_Identity=28.6764705882353, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33114; Mature: 33114

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPIRAIIGFIGPSIILLLIFMLIPIVVSLVISFTDFDVYAIYNWGNASFIGFENYVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECHHHHHHH
MHDPLFWRALLNTLYALVVAMPITIVLSLSFAALINREATYFKNFFKVSFYLPSITNTVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCHHHHHH
IAIVWAWMLNPDYGLLNWFLGLFGIQGPNWLGDPLWAMPSVIMLVVWKAVGYNIILFTAG
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
LQNIPDYLYEAAELDGASRFQQFLHVTIPSLRPTIFFVTVMTVIGYLQLFEEPYMLTSGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC
PLNATLSIVLYLYRQGFEFFKLGYSSSIAFVLFLIIFALTYIQMRARRSEV
CCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTPIRAIIGFIGPSIILLLIFMLIPIVVSLVISFTDFDVYAIYNWGNASFIGFENYVNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECHHHHHHH
MHDPLFWRALLNTLYALVVAMPITIVLSLSFAALINREATYFKNFFKVSFYLPSITNTVA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCHHHHHH
IAIVWAWMLNPDYGLLNWFLGLFGIQGPNWLGDPLWAMPSVIMLVVWKAVGYNIILFTAG
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
LQNIPDYLYEAAELDGASRFQQFLHVTIPSLRPTIFFVTVMTVIGYLQLFEEPYMLTSGG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCC
PLNATLSIVLYLYRQGFEFFKLGYSSSIAFVLFLIIFALTYIQMRARRSEV
CCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]