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The map label for this gene is ctpA [H]

Identifier: 160902286

GI number: 160902286

Start: 860225

End: 861505

Strand: Direct

Name: ctpA [H]

Synonym: Pmob_0820

Alternate gene names: 160902286

Gene position: 860225-861505 (Clockwise)

Preceding gene: 160902285

Following gene: 160902287

Centisome position: 39.65

GC content: 35.28

Gene sequence:

>1281_bases
ATGAGTAAAAAAAAGAAAAAATTACTATCCGTAATAATAATTTTTGGTTTATTTATTACTTCCTGGATTTTTGCAGACAC
TGTTTCTAACAGTTATCAAAAAGATTCTGTAACACAGATCTATTTAGATAAGTTCGAAGAACCTATTTACTCAACGCTAT
ACTACATTGTCAATTATTATTATGACAAAGATAACGTTGATTATGACAAAATATTGGATTCTGCAATTGAAGGGATGATG
AAAGGGCTTGATGATCCTTTTGCTTGGTACCTTGATTCCGTTGAGACAGAAGAAAGTAACATAGACATAGAAGGTAGATA
CGGTGGGGTAGGGTTGACTATTAGATATGATTATGAAATGGATGCGGTTATTATCGTCTCACCGATGAATGGAACTCCTG
CACAAAGGGCGGGAATAATGCCTAACGATTACATTTTATCCGTTGACGGTACCCCCACATCTGAACTTGGCCTTAACAAA
TCAGCTTCGTTAATGAGGGGCGAACCTGGAACGGAAGTTACCTTAGAAATATACCGAGACTCTTGGACAGAGCCAAAGAA
TATTACGTTAATAAGAGAAATAATCGAAACTAAGACGGTAAAATTTGATACGATAAATTACAAAAGTAAAAATTTAGGCT
ACATATTACTCACCAATTTTGCTAAAACTAGCTCCCAAGAAATGAGTGAAGCTTTAAATAATCTATCAAATCAGAACATA
GAAGGATTAATAATCGATTTAAGAAATAACCCGGGTGGACTTTTACAATCAGCTGTTGATATTACTTCCATGTTTTTAAA
GAGCGGGGAAGTAGTTAGTGTTAAATATTTTGATGGCACAAAAGAAACAATTCCAACTATTCCTGGTAATTACTACAGTT
TTTTACAAAATATCCCTATTGTTTTGTTGGTTAACGAAGGTTCGGCATCTGCATCTGAGATCTTAACTGGTGCACTTAAA
GATAATGGTGCAGCAACCGTCATTGGAGAAACAACTTATGGAAAAGCTGCAGTACAGAACACATTTAGCTTATCCACGGG
AGGAGAAATTTGGTTACCTATAGCTCATTACTTCACTCCAAGTGGATCAGATATTCATTTAAAAGGGATAAAACCTGATA
TAGAGGTAAGTAATCCAGAAAGGGAAGTGATCTCTATGACTGAAATATCTGAAGAAGAAGCAACTGAGGCTTTCTATACG
ACTACAGAAAAACCTGTACTAAATATAGAAGAAGATCTGCAACTGAAGACTGCCTTGGACTTTTTAACTGGAGGTAACTA
A

Upstream 100 bases:

>100_bases
GGAAATGAAAAGATGTTAGACGAATTAATACAAGTTTTATCCAAATTTAGAGAAATATGATTGTGGACCATATAAAAATT
TTTATCAAGGAGAGACTTAA

Downstream 100 bases:

>100_bases
GTTGCGTTTTTATGGATGGGTTATATCTATTTTTTTATTATTCTTTTCTTTGTCAATTGGTTTATATTTCTCAATGGGTC
GAATAGAAAGTACCAATTAC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSKKKKKLLSVIIIFGLFITSWIFADTVSNSYQKDSVTQIYLDKFEEPIYSTLYYIVNYYYDKDNVDYDKILDSAIEGMM
KGLDDPFAWYLDSVETEESNIDIEGRYGGVGLTIRYDYEMDAVIIVSPMNGTPAQRAGIMPNDYILSVDGTPTSELGLNK
SASLMRGEPGTEVTLEIYRDSWTEPKNITLIREIIETKTVKFDTINYKSKNLGYILLTNFAKTSSQEMSEALNNLSNQNI
EGLIIDLRNNPGGLLQSAVDITSMFLKSGEVVSVKYFDGTKETIPTIPGNYYSFLQNIPIVLLVNEGSASASEILTGALK
DNGAATVIGETTYGKAAVQNTFSLSTGGEIWLPIAHYFTPSGSDIHLKGIKPDIEVSNPEREVISMTEISEEEATEAFYT
TTEKPVLNIEEDLQLKTALDFLTGGN

Sequences:

>Translated_426_residues
MSKKKKKLLSVIIIFGLFITSWIFADTVSNSYQKDSVTQIYLDKFEEPIYSTLYYIVNYYYDKDNVDYDKILDSAIEGMM
KGLDDPFAWYLDSVETEESNIDIEGRYGGVGLTIRYDYEMDAVIIVSPMNGTPAQRAGIMPNDYILSVDGTPTSELGLNK
SASLMRGEPGTEVTLEIYRDSWTEPKNITLIREIIETKTVKFDTINYKSKNLGYILLTNFAKTSSQEMSEALNNLSNQNI
EGLIIDLRNNPGGLLQSAVDITSMFLKSGEVVSVKYFDGTKETIPTIPGNYYSFLQNIPIVLLVNEGSASASEILTGALK
DNGAATVIGETTYGKAAVQNTFSLSTGGEIWLPIAHYFTPSGSDIHLKGIKPDIEVSNPEREVISMTEISEEEATEAFYT
TTEKPVLNIEEDLQLKTALDFLTGGN
>Mature_425_residues
SKKKKKLLSVIIIFGLFITSWIFADTVSNSYQKDSVTQIYLDKFEEPIYSTLYYIVNYYYDKDNVDYDKILDSAIEGMMK
GLDDPFAWYLDSVETEESNIDIEGRYGGVGLTIRYDYEMDAVIIVSPMNGTPAQRAGIMPNDYILSVDGTPTSELGLNKS
ASLMRGEPGTEVTLEIYRDSWTEPKNITLIREIIETKTVKFDTINYKSKNLGYILLTNFAKTSSQEMSEALNNLSNQNIE
GLIIDLRNNPGGLLQSAVDITSMFLKSGEVVSVKYFDGTKETIPTIPGNYYSFLQNIPIVLLVNEGSASASEILTGALKD
NGAATVIGETTYGKAAVQNTFSLSTGGEIWLPIAHYFTPSGSDIHLKGIKPDIEVSNPEREVISMTEISEEEATEAFYTT
TEKPVLNIEEDLQLKTALDFLTGGN

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=312, Percent_Identity=31.0897435897436, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47282; Mature: 47151

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKKKLLSVIIIFGLFITSWIFADTVSNSYQKDSVTQIYLDKFEEPIYSTLYYIVNYY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEE
YDKDNVDYDKILDSAIEGMMKGLDDPFAWYLDSVETEESNIDIEGRYGGVGLTIRYDYEM
ECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCEEEEEEECCCC
DAVIIVSPMNGTPAQRAGIMPNDYILSVDGTPTSELGLNKSASLMRGEPGTEVTLEIYRD
CEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHHCCCCCCEEEEEEEEC
SWTEPKNITLIREIIETKTVKFDTINYKSKNLGYILLTNFAKTSSQEMSEALNNLSNQNI
CCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC
EGLIIDLRNNPGGLLQSAVDITSMFLKSGEVVSVKYFDGTKETIPTIPGNYYSFLQNIPI
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCE
VLLVNEGSASASEILTGALKDNGAATVIGETTYGKAAVQNTFSLSTGGEIWLPIAHYFTP
EEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCEEEECCCCEEEEEEEEEECC
SGSDIHLKGIKPDIEVSNPEREVISMTEISEEEATEAFYTTTEKPVLNIEEDLQLKTALD
CCCEEEEECCCCCCCCCCCHHHHEEHHHCCHHHHHHHHEECCCCCEECCHHHHHHHHHHH
FLTGGN
HHCCCC
>Mature Secondary Structure 
SKKKKKLLSVIIIFGLFITSWIFADTVSNSYQKDSVTQIYLDKFEEPIYSTLYYIVNYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEE
YDKDNVDYDKILDSAIEGMMKGLDDPFAWYLDSVETEESNIDIEGRYGGVGLTIRYDYEM
ECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCEEEEEEECCCC
DAVIIVSPMNGTPAQRAGIMPNDYILSVDGTPTSELGLNKSASLMRGEPGTEVTLEIYRD
CEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHHCCCCCCEEEEEEEEC
SWTEPKNITLIREIIETKTVKFDTINYKSKNLGYILLTNFAKTSSQEMSEALNNLSNQNI
CCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC
EGLIIDLRNNPGGLLQSAVDITSMFLKSGEVVSVKYFDGTKETIPTIPGNYYSFLQNIPI
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCE
VLLVNEGSASASEILTGALKDNGAATVIGETTYGKAAVQNTFSLSTGGEIWLPIAHYFTP
EEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCEEEECCCCEEEEEEEEEECC
SGSDIHLKGIKPDIEVSNPEREVISMTEISEEEATEAFYTTTEKPVLNIEEDLQLKTALD
CCCEEEEECCCCCCCCCCCHHHHEEHHHCCHHHHHHHHEECCCCCEECCHHHHHHHHHHH
FLTGGN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]