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The map label for this gene is csoR [H]

Identifier: 160902285

GI number: 160902285

Start: 859915

End: 860184

Strand: Direct

Name: csoR [H]

Synonym: Pmob_0819

Alternate gene names: 160902285

Gene position: 859915-860184 (Clockwise)

Preceding gene: 160902284

Following gene: 160902286

Centisome position: 39.64

GC content: 32.59

Gene sequence:

>270_bases
ATGTCTTCAAACTACGACAAAGATAATTTAATCAGACGATTAAAAAGAATAGAAGGTCAGGTTAGGGGCCTTCAAAAAAT
GTTGGAAGAAGAGAGGAGATGTGCAGATATTTTAACGCAGTTATCTGCTGTGAAGGGGGCTTTAAATAAAACCGCTGAAG
AAATAATGAAAGGTTACACGAAAAGTTGTATATTAGAGTATGAAGAATCTGGAAATGAAAAGATGTTAGACGAATTAATA
CAAGTTTTATCCAAATTTAGAGAAATATGA

Upstream 100 bases:

>100_bases
TAATGACTACGTTTTAAAAGATAAAGATGTAAAAGAAACGAATCTTTTTGTTTCTTATGCCTAAATATTTATAGACATTT
TAATTTTGAGAGGTGTGTTC

Downstream 100 bases:

>100_bases
TTGTGGACCATATAAAAATTTTTATCAAGGAGAGACTTAAATGAGTAAAAAAAAGAAAAAATTACTATCCGTAATAATAA
TTTTTGGTTTATTTATTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSSNYDKDNLIRRLKRIEGQVRGLQKMLEEERRCADILTQLSAVKGALNKTAEEIMKGYTKSCILEYEESGNEKMLDELI
QVLSKFREI

Sequences:

>Translated_89_residues
MSSNYDKDNLIRRLKRIEGQVRGLQKMLEEERRCADILTQLSAVKGALNKTAEEIMKGYTKSCILEYEESGNEKMLDELI
QVLSKFREI
>Mature_88_residues
SSNYDKDNLIRRLKRIEGQVRGLQKMLEEERRCADILTQLSAVKGALNKTAEEIMKGYTKSCILEYEESGNEKMLDELIQ
VLSKFREI

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

Organism=Escherichia coli, GI1788422, Length=82, Percent_Identity=37.8048780487805, Blast_Score=60, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10341; Mature: 10210

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNYDKDNLIRRLKRIEGQVRGLQKMLEEERRCADILTQLSAVKGALNKTAEEIMKGYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSCILEYEESGNEKMLDELIQVLSKFREI
HHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSNYDKDNLIRRLKRIEGQVRGLQKMLEEERRCADILTQLSAVKGALNKTAEEIMKGYT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSCILEYEESGNEKMLDELIQVLSKFREI
HHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]