Click here to switch to the map view.

The map label for this gene is yebC [C]

Identifier: 160902273

GI number: 160902273

Start: 846774

End: 847529

Strand: Direct

Name: yebC [C]

Synonym: Pmob_0807

Alternate gene names: 160902273

Gene position: 846774-847529 (Clockwise)

Preceding gene: 160902226

Following gene: 160902274

Centisome position: 39.03

GC content: 40.61

Gene sequence:

>756_bases
ATGTCAGGACATAATAAATGGGCAAATATTAAACACAGAAAGGGCGCACAAGATGCAAAAAGATCCCAAATGTTTACGAA
ACTCATCAGAGAGCTTACAATAGCTGCTAGAGAAGGCGGAGGAGATCCAGAATCTAATCCACGCTTAAGAACCGCAGTAG
AAAACGCCAAAGCAGCTAACATGCCTAAAGACAAGATCGAATCAGCTATAAAAAAAGGAACCGGCGAATTAGAGGGTGAA
GAACTCACCGAAATAATGTACGAGGCATACGGTCCAGGCGGAGTTGCACTCCTAATTTCAGTTGTAACCGATAACAAGAA
TCGAACTGCTCAAGAAGTTCGCCATGTCCTTTCAAAATGGGGAGGAGCTTTGGCAGAATCAGGTTCTGTTTCATGGAATT
TCGAACGAAAAGGACTAATAACCATCCCCAAAGAAGAAGTTGAAGATATTGACGAGCTAATGTTACTTGCGGTTGAAGCT
GGCGCAGAAGATTTAGATGAAAACACCGATCCTTTAGAAATTATAACCGCCCCGGAAAATCTGACTCAGGTGAGAAATGC
TTTAAAAGAAGCAGGTTATACCGTCTCTGAAAAATTAACCTTTTTGCCTAAAACAACCGTTAAGCTTTCTGATGAAGACG
CTGAAAAGTTATTAAAATTGTTAAACGCCTTGGATGATATGGATGACGTCCAAGAAGTATTCGGAAATTACGAGATCGAC
GATGAAGTAATGGAAAGACTTGCTGCAAATATTTAA

Upstream 100 bases:

>100_bases
GTAATCCTTAAAAGTATAATAGTTTTTGTCAAAAATTTAATTGGCTCAAGGAACCGCAATAAAAATAATTTATTCATTGT
TTGTGAGGAGGTTGAATATT

Downstream 100 bases:

>100_bases
GAGCCCATAAATGGGGACGAAAGTCCCCATTTTAAATTATTTGGTAATTATTTGGGAAAGGATAATTGCAAATGAAAAGA
TTTCCATTAGTACTTATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGGDPESNPRLRTAVENAKAANMPKDKIESAIKKGTGELEGE
ELTEIMYEAYGPGGVALLISVVTDNKNRTAQEVRHVLSKWGGALAESGSVSWNFERKGLITIPKEEVEDIDELMLLAVEA
GAEDLDENTDPLEIITAPENLTQVRNALKEAGYTVSEKLTFLPKTTVKLSDEDAEKLLKLLNALDDMDDVQEVFGNYEID
DEVMERLAANI

Sequences:

>Translated_251_residues
MSGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGGDPESNPRLRTAVENAKAANMPKDKIESAIKKGTGELEGE
ELTEIMYEAYGPGGVALLISVVTDNKNRTAQEVRHVLSKWGGALAESGSVSWNFERKGLITIPKEEVEDIDELMLLAVEA
GAEDLDENTDPLEIITAPENLTQVRNALKEAGYTVSEKLTFLPKTTVKLSDEDAEKLLKLLNALDDMDDVQEVFGNYEID
DEVMERLAANI
>Mature_250_residues
SGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGGDPESNPRLRTAVENAKAANMPKDKIESAIKKGTGELEGEE
LTEIMYEAYGPGGVALLISVVTDNKNRTAQEVRHVLSKWGGALAESGSVSWNFERKGLITIPKEEVEDIDELMLLAVEAG
AEDLDENTDPLEIITAPENLTQVRNALKEAGYTVSEKLTFLPKTTVKLSDEDAEKLLKLLNALDDMDDVQEVFGNYEIDD
EVMERLAANI

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=35.6275303643725, Blast_Score=159, Evalue=2e-39,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=48.1927710843374, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=37.3390557939914, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=27.0161290322581, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6321458, Length=265, Percent_Identity=32.0754716981132, Blast_Score=123, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24583305, Length=253, Percent_Identity=31.6205533596838, Blast_Score=100, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y807_PETMO (A9BHC2)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001567854.1
- ProteinModelPortal:   A9BHC2
- SMR:   A9BHC2
- GeneID:   5756991
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_0807
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   PMOB403833:PMOB_0807-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27696; Mature: 27564

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGGDPESNPRLRTAVENAKAAN
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MPKDKIESAIKKGTGELEGEELTEIMYEAYGPGGVALLISVVTDNKNRTAQEVRHVLSKW
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGALAESGSVSWNFERKGLITIPKEEVEDIDELMLLAVEAGAEDLDENTDPLEIITAPEN
CCHHHCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCHH
LTQVRNALKEAGYTVSEKLTFLPKTTVKLSDEDAEKLLKLLNALDDMDDVQEVFGNYEID
HHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DEVMERLAANI
HHHHHHHHHCC
>Mature Secondary Structure 
SGHNKWANIKHRKGAQDAKRSQMFTKLIRELTIAAREGGGDPESNPRLRTAVENAKAAN
CCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MPKDKIESAIKKGTGELEGEELTEIMYEAYGPGGVALLISVVTDNKNRTAQEVRHVLSKW
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGALAESGSVSWNFERKGLITIPKEEVEDIDELMLLAVEAGAEDLDENTDPLEIITAPEN
CCHHHCCCCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCHH
LTQVRNALKEAGYTVSEKLTFLPKTTVKLSDEDAEKLLKLLNALDDMDDVQEVFGNYEID
HHHHHHHHHHCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
DEVMERLAANI
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA