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The map label for this gene is tnpA [H]

Identifier: 160901783

GI number: 160901783

Start: 321309

End: 322535

Strand: Direct

Name: tnpA [H]

Synonym: Pmob_0299

Alternate gene names: 160901783

Gene position: 321309-322535 (Clockwise)

Preceding gene: 160901780

Following gene: 160901784

Centisome position: 14.81

GC content: 33.82

Gene sequence:

>1227_bases
ATGAGAAAAGAGTTACCAAAATTTTTTGAACAGATACTGAATATAACAGAGCCATGGTACATAGAAGAGATAGAACAACA
AGGAAATACAATCAACATATATGTGGATTTCAAAAAAGGTGCAAAGTTCGAATACAATGGTAAATATTACAGTGCATACG
ATACGGTTCAAAGGAGTTGGAGACACTTAAACTTATTCCAGTATGAAACATACATACATGCAAGGGTAGCTAGGATAAAA
ACAGATGATGGAACAAAGACTGTAGAGGTTCCTTGGGCTCGAAAAAACTCTGGATTCACCTTATTGTTTGAAGCGTTTAT
TCTCGAGTTGTACAACCACATGACGGTTGCTGAGATAGCTAAAAAGTATAATACAACACAAAATAGGTTGTGGAGAATAT
TAGACTTTTACGTTTCAAAGGAATTAGAAAAACAAGATTTCTCAAAAGAACCGATAAAAACGTTATCTGTTGATGAAATA
GCAAGGAAAAAGCATCATGTATATTTAACCAATTTCTTAGATGTGGAACGAGAAAAGGTTGTACATATAGCTGATGGTAA
AGATGCAGAAACCTTTCTATCGTTTAAAGAAAGATACACTGAAAAAAACGGTGATCCAACAGACATAGAGTCCATATGCA
TGGATATGTCGGTACCTTTCAAAGCTGGAGCAAGGAAACATTTCCCAAAAGCAAAGATAATATTTGACAAATTCCATGTG
CTTAATGTATTAAGTGTCCAACTTGATAAAGTGAGAGCCAGAGAGAATAAAGGGTACCATGAAATACTCAAAAGGACAAA
ATACTTGCTATTAAAAAATCCTAACAACCTTACCAAGAAAGATAAAGCTAGACTCGATGAAACGCCCCGAAAGGGGTTCA
AGGAAGAACAACATCTTGACACAGTTCAAGCCTACGGATTGGTACTTGAGTTTAAAAAGATGTTCGATTACAAGAAACCT
TCTTATGCAGCTAAGTATTTTAAACGATGGTATGAAAAGGTAATGAAATCAAACATACCCGAAATGATTAAAGCTGCTAA
GACTCTCTTAAATCACATAGAAGGTATCTTGTTGCACATAAAAACGAATATCTCAAACGGTAAAATAGAAGGTATGAACT
CTAAACTTAGAGGATTTACTAAAAGAGCTTTTGGTTTTAAAACATTAAAGAATTTAAAAATCACTATATTTATTGCCCTT
GGTAAACTTAATTTAACTCCAGCTTAA

Upstream 100 bases:

>100_bases
TCTTCCAAAAAGTGTGGGTAGAAAAAATGAAATATGAACAAATGATTAAATAATCTGGTATCATGTAGAAGAACACAAAA
CATATAGGGAGTGATACCAG

Downstream 100 bases:

>100_bases
TTACCCACTATTTTCGTGATAGAACCATTTTTGAATCGATTTAAATGAAAAAATCGAACCAGAAAATTATCAAATAAATT
CAAAAAGAGTGATAAAATTA

Product: transposase IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MRKELPKFFEQILNITEPWYIEEIEQQGNTINIYVDFKKGAKFEYNGKYYSAYDTVQRSWRHLNLFQYETYIHARVARIK
TDDGTKTVEVPWARKNSGFTLLFEAFILELYNHMTVAEIAKKYNTTQNRLWRILDFYVSKELEKQDFSKEPIKTLSVDEI
ARKKHHVYLTNFLDVEREKVVHIADGKDAETFLSFKERYTEKNGDPTDIESICMDMSVPFKAGARKHFPKAKIIFDKFHV
LNVLSVQLDKVRARENKGYHEILKRTKYLLLKNPNNLTKKDKARLDETPRKGFKEEQHLDTVQAYGLVLEFKKMFDYKKP
SYAAKYFKRWYEKVMKSNIPEMIKAAKTLLNHIEGILLHIKTNISNGKIEGMNSKLRGFTKRAFGFKTLKNLKITIFIAL
GKLNLTPA

Sequences:

>Translated_408_residues
MRKELPKFFEQILNITEPWYIEEIEQQGNTINIYVDFKKGAKFEYNGKYYSAYDTVQRSWRHLNLFQYETYIHARVARIK
TDDGTKTVEVPWARKNSGFTLLFEAFILELYNHMTVAEIAKKYNTTQNRLWRILDFYVSKELEKQDFSKEPIKTLSVDEI
ARKKHHVYLTNFLDVEREKVVHIADGKDAETFLSFKERYTEKNGDPTDIESICMDMSVPFKAGARKHFPKAKIIFDKFHV
LNVLSVQLDKVRARENKGYHEILKRTKYLLLKNPNNLTKKDKARLDETPRKGFKEEQHLDTVQAYGLVLEFKKMFDYKKP
SYAAKYFKRWYEKVMKSNIPEMIKAAKTLLNHIEGILLHIKTNISNGKIEGMNSKLRGFTKRAFGFKTLKNLKITIFIAL
GKLNLTPA
>Mature_408_residues
MRKELPKFFEQILNITEPWYIEEIEQQGNTINIYVDFKKGAKFEYNGKYYSAYDTVQRSWRHLNLFQYETYIHARVARIK
TDDGTKTVEVPWARKNSGFTLLFEAFILELYNHMTVAEIAKKYNTTQNRLWRILDFYVSKELEKQDFSKEPIKTLSVDEI
ARKKHHVYLTNFLDVEREKVVHIADGKDAETFLSFKERYTEKNGDPTDIESICMDMSVPFKAGARKHFPKAKIIFDKFHV
LNVLSVQLDKVRARENKGYHEILKRTKYLLLKNPNNLTKKDKARLDETPRKGFKEEQHLDTVQAYGLVLEFKKMFDYKKP
SYAAKYFKRWYEKVMKSNIPEMIKAAKTLLNHIEGILLHIKTNISNGKIEGMNSKLRGFTKRAFGFKTLKNLKITIFIAL
GKLNLTPA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 48100; Mature: 48100

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKELPKFFEQILNITEPWYIEEIEQQGNTINIYVDFKKGAKFEYNGKYYSAYDTVQRSW
CCCHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEECCCEEHHHHHHHHHH
RHLNLFQYETYIHARVARIKTDDGTKTVEVPWARKNSGFTLLFEAFILELYNHMTVAEIA
HHCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHH
KKYNTTQNRLWRILDFYVSKELEKQDFSKEPIKTLSVDEIARKKHHVYLTNFLDVEREKV
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHCEEEEEHHHHCCCHHE
VHIADGKDAETFLSFKERYTEKNGDPTDIESICMDMSVPFKAGARKHFPKAKIIFDKFHV
EEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHH
LNVLSVQLDKVRARENKGYHEILKRTKYLLLKNPNNLTKKDKARLDETPRKGFKEEQHLD
HHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCHHHHHCCCCHHHCCCHHHHHH
TVQAYGLVLEFKKMFDYKKPSYAAKYFKRWYEKVMKSNIPEMIKAAKTLLNHIEGILLHI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEE
KTNISNGKIEGMNSKLRGFTKRAFGFKTLKNLKITIFIALGKLNLTPA
EECCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MRKELPKFFEQILNITEPWYIEEIEQQGNTINIYVDFKKGAKFEYNGKYYSAYDTVQRSW
CCCHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCEEECCCEEHHHHHHHHHH
RHLNLFQYETYIHARVARIKTDDGTKTVEVPWARKNSGFTLLFEAFILELYNHMTVAEIA
HHCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHH
KKYNTTQNRLWRILDFYVSKELEKQDFSKEPIKTLSVDEIARKKHHVYLTNFLDVEREKV
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHCEEEEEHHHHCCCHHE
VHIADGKDAETFLSFKERYTEKNGDPTDIESICMDMSVPFKAGARKHFPKAKIIFDKFHV
EEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCEEHHHHHHH
LNVLSVQLDKVRARENKGYHEILKRTKYLLLKNPNNLTKKDKARLDETPRKGFKEEQHLD
HHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCHHHHHCCCCHHHCCCHHHHHH
TVQAYGLVLEFKKMFDYKKPSYAAKYFKRWYEKVMKSNIPEMIKAAKTLLNHIEGILLHI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEE
KTNISNGKIEGMNSKLRGFTKRAFGFKTLKNLKITIFIALGKLNLTPA
EECCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]