Click here to switch to the map view.

The map label for this gene is yloC [H]

Identifier: 160901589

GI number: 160901589

Start: 96468

End: 97352

Strand: Direct

Name: yloC [H]

Synonym: Pmob_0098

Alternate gene names: 160901589

Gene position: 96468-97352 (Clockwise)

Preceding gene: 160901588

Following gene: 160901590

Centisome position: 4.45

GC content: 31.19

Gene sequence:

>885_bases
ATGCGAAGTATGACCGGTTATGGGAGATTAACAAAAAATATTGGCGATTATAGCTATAATGTAGAAATAAAATCTCTCAA
CTCCAAAAATCTAAACATCAACACTTCAATCTCACCTTTGTTTTCTCCATTAGAATTACATATTCAAAATCTTGTGAAAA
AATACTTCAAAAGAGGAACCTTGCGAATTTCTGTAGATATAAAATTATTGAAAACAGACGACATAATCGATGTTGACTTA
GGGCTAGCTAAAGCCTATTACAACGCCCTCAACAGTTTGATCAACGAACTGCATTTAGCAGATGATGTTAATTTAGAAGA
TCTGTTAAAATTTAAAGATATTGTTAAAATTTCCATTGATGAAAAAACTATCGATGATATTTGGGAAGGTGCGAAAGAAG
TTTTAAAAGAGGTTATCGAAACCGTATTGAAATATCAAAAGGAAGAAGGGAAAGATCTAAAAGACTTTCTTGATGGCTAT
TTGACTGAACTTGAAGATATCATTATTAAAATAGAGGAAAATGCTCAGCAAATGAAAGAAAAATATAGAGAACAGTTAAA
ACACAACGTTAATTCTTTGATTAGTAATATAGATAGCATCGATGAAAATAGGTTAGAAATGGAAATAGTCTTATTAGCAG
AAAGAGCCGACATTAGCGAAGAAATGGATAGATTAAAAAGTCACACTAGAAGGTTTAAAAATTTTCTAGAAAATGAAAAT
AATAACGACAGTATAGGGCAAGAACTAGATTTTATCTGTCAAGAAATGCATAGGGAATTAAACACGATCGCCTCCAAGTC
AAAAATTTTAGATATAACTAACCTTTCCTTGGAAGGGAGAACCCTGGTTAATAAAATTCGAGAGCAAGTTCAAAATCTTC
ATTGA

Upstream 100 bases:

>100_bases
GACGATGAGGCCGAATTATTCGTGATTAAGTTAAAAAATGTCTTAAAATTTTTGAATTATTGACTTTTTAATGTATAATA
AACATAAAGGGGGCGAAATT

Downstream 100 bases:

>100_bases
ATTATGGTAAGTGATCAAAAATATCGCATTGAAGTACGCATAATTTGCATTTTAAAGGTGTTTAAGGCAAGGATGAATCT
TAGCTAAATCTTTTTGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MRSMTGYGRLTKNIGDYSYNVEIKSLNSKNLNINTSISPLFSPLELHIQNLVKKYFKRGTLRISVDIKLLKTDDIIDVDL
GLAKAYYNALNSLINELHLADDVNLEDLLKFKDIVKISIDEKTIDDIWEGAKEVLKEVIETVLKYQKEEGKDLKDFLDGY
LTELEDIIIKIEENAQQMKEKYREQLKHNVNSLISNIDSIDENRLEMEIVLLAERADISEEMDRLKSHTRRFKNFLENEN
NNDSIGQELDFICQEMHRELNTIASKSKILDITNLSLEGRTLVNKIREQVQNLH

Sequences:

>Translated_294_residues
MRSMTGYGRLTKNIGDYSYNVEIKSLNSKNLNINTSISPLFSPLELHIQNLVKKYFKRGTLRISVDIKLLKTDDIIDVDL
GLAKAYYNALNSLINELHLADDVNLEDLLKFKDIVKISIDEKTIDDIWEGAKEVLKEVIETVLKYQKEEGKDLKDFLDGY
LTELEDIIIKIEENAQQMKEKYREQLKHNVNSLISNIDSIDENRLEMEIVLLAERADISEEMDRLKSHTRRFKNFLENEN
NNDSIGQELDFICQEMHRELNTIASKSKILDITNLSLEGRTLVNKIREQVQNLH
>Mature_294_residues
MRSMTGYGRLTKNIGDYSYNVEIKSLNSKNLNINTSISPLFSPLELHIQNLVKKYFKRGTLRISVDIKLLKTDDIIDVDL
GLAKAYYNALNSLINELHLADDVNLEDLLKFKDIVKISIDEKTIDDIWEGAKEVLKEVIETVLKYQKEEGKDLKDFLDGY
LTELEDIIIKIEENAQQMKEKYREQLKHNVNSLISNIDSIDENRLEMEIVLLAERADISEEMDRLKSHTRRFKNFLENEN
NNDSIGQELDFICQEMHRELNTIASKSKILDITNLSLEGRTLVNKIREQVQNLH

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=300, Percent_Identity=29.3333333333333, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34159; Mature: 34159

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMTGYGRLTKNIGDYSYNVEIKSLNSKNLNINTSISPLFSPLELHIQNLVKKYFKRGT
CCCCCCCHHHHHCCCCEEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCC
LRISVDIKLLKTDDIIDVDLGLAKAYYNALNSLINELHLADDVNLEDLLKFKDIVKISID
EEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECC
EKTIDDIWEGAKEVLKEVIETVLKYQKEEGKDLKDFLDGYLTELEDIIIKIEENAQQMKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYREQLKHNVNSLISNIDSIDENRLEMEIVLLAERADISEEMDRLKSHTRRFKNFLENEN
HHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCC
NNDSIGQELDFICQEMHRELNTIASKSKILDITNLSLEGRTLVNKIREQVQNLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSMTGYGRLTKNIGDYSYNVEIKSLNSKNLNINTSISPLFSPLELHIQNLVKKYFKRGT
CCCCCCCHHHHHCCCCEEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCC
LRISVDIKLLKTDDIIDVDLGLAKAYYNALNSLINELHLADDVNLEDLLKFKDIVKISID
EEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECC
EKTIDDIWEGAKEVLKEVIETVLKYQKEEGKDLKDFLDGYLTELEDIIIKIEENAQQMKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYREQLKHNVNSLISNIDSIDENRLEMEIVLLAERADISEEMDRLKSHTRRFKNFLENEN
HHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCC
NNDSIGQELDFICQEMHRELNTIASKSKILDITNLSLEGRTLVNKIREQVQNLH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]