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The map label for this gene is atpC

Identifier: 160877607

GI number: 160877607

Start: 5330698

End: 5331126

Strand: Reverse

Name: atpC

Synonym: Sbal195_4506

Alternate gene names: 160877607

Gene position: 5331126-5330698 (Counterclockwise)

Preceding gene: 160877608

Following gene: 160877606

Centisome position: 99.7

GC content: 45.69

Gene sequence:

>429_bases
ATGGCAGCCATGACAGTACATCTTGATATAGTAAGTGCAGAGAGCAAAATCTTCTCTGGTCGTGTAGCTTCGCTGCAAGT
GACTGGTTCAGAAGGTGAGTTGGGCATAATGCATGGCCATGCTCCTTTGCTGAGTTATATCAAACCTGGCATGGCGCGCA
TCGTCAAGCAAGACGGCAGTGAAGAAGTGTTTTACCTTTCAGGTGGTATTCTGGAAGTACAACCTTCTACTGTTTCCGTA
TTGGCTGATGTGGTTATGCGTGCCAAAGATATTGATGAGCAAGCGGCATTAGAAGCTAAGCGTCGTGCAGAAGCCCATAT
GGCAAATGCAGGTGCTGACTTCAATTATGACGCGGCTATGGTTGAACTAGCTAAGGCTATGGCTCAATTACGTGTTGTTG
AAACCATCAAGAAAAACATTGCCAGATAA

Upstream 100 bases:

>100_bases
ACAAGCGTTCTACATGGTTGGCTCAATCGATGAAGTCATCGAGAAAGCGAACAAAAAGAAATAACTAAGTAGCAATATTT
AGTTTCTTAAGGAGAACGGG

Downstream 100 bases:

>100_bases
GGTTATTGTTTGTGAAAAAAGGCGACCATAAGGTCGCCTTTTTTGTGACTGAAATTTGGATAAACGTTTGCTGTCGTGTG
TATTTGATTTCTTCTTCTCA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAAMTVHLDIVSAESKIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVKQDGSEEVFYLSGGILEVQPSTVSV
LADVVMRAKDIDEQAALEAKRRAEAHMANAGADFNYDAAMVELAKAMAQLRVVETIKKNIAR

Sequences:

>Translated_142_residues
MAAMTVHLDIVSAESKIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVKQDGSEEVFYLSGGILEVQPSTVSV
LADVVMRAKDIDEQAALEAKRRAEAHMANAGADFNYDAAMVELAKAMAQLRVVETIKKNIAR
>Mature_141_residues
AAMTVHLDIVSAESKIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVKQDGSEEVFYLSGGILEVQPSTVSVL
ADVVMRAKDIDEQAALEAKRRAEAHMANAGADFNYDAAMVELAKAMAQLRVVETIKKNIAR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=136, Percent_Identity=64.7058823529412, Blast_Score=179, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SHEB2 (B8EDU9)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002360198.1
- ProteinModelPortal:   B8EDU9
- SMR:   B8EDU9
- GeneID:   7089114
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_4309
- HOGENOM:   HBG663981
- OMA:   SAEASIF
- ProtClustDB:   PRK00571
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15227; Mature: 15096

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAMTVHLDIVSAESKIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVKQDGS
CCEEEEEEEEEECCCHHHCCCEEEEEEECCCCCEEEEECCHHHHHHHCHHHHHHHHCCCC
EEVFYLSGGILEVQPSTVSVLADVVMRAKDIDEQAALEAKRRAEAHMANAGADFNYDAAM
CEEEEEECCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VELAKAMAQLRVVETIKKNIAR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAMTVHLDIVSAESKIFSGRVASLQVTGSEGELGIMHGHAPLLSYIKPGMARIVKQDGS
CEEEEEEEEEECCCHHHCCCEEEEEEECCCCCEEEEECCHHHHHHHCHHHHHHHHCCCC
EEVFYLSGGILEVQPSTVSVLADVVMRAKDIDEQAALEAKRRAEAHMANAGADFNYDAAM
CEEEEEECCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VELAKAMAQLRVVETIKKNIAR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA