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The map label for this gene is atpD1 [H]

Identifier: 160877608

GI number: 160877608

Start: 5331163

End: 5332554

Strand: Reverse

Name: atpD1 [H]

Synonym: Sbal195_4507

Alternate gene names: 160877608

Gene position: 5332554-5331163 (Counterclockwise)

Preceding gene: 160877609

Following gene: 160877607

Centisome position: 99.72

GC content: 46.26

Gene sequence:

>1392_bases
ATGAGCACAGGTACTGTTGTCCAAGTGATTGGCGCGGTTGTGGACGTAGAGTTTCCACAAGATGCCGTACCTCAAGTATA
TGACGCTCTGAAAATCGTAGGTGAAGGCCCGTGTAATGGTTTGGTGCTGGAAGTTCAGCAACAACTAGGTGGTGGTGTAG
TTCGTACCATCGCTATGGGTTCTTCTGACGGTCTGCGTCGTGGGCTTGAAGTAGTAAACTCAGGTTCACCTATTACTGTT
CCTGTTGGTACCGCCACTCTTGGCCGTATCATGAACGTATTAGGCGAGCCTATTGATGAAGCGGGTCCAATCGGTGAAGA
AGAGCGTTATGTTATTCACCGTACAGCTCCTTCATACGAAGATCAATCAAGCTCTACTGAACTATTAGAGACTGGTATCA
AGGTTATTGACCTTGTTTGTCCATTCGCTAAGGGTGGTAAAGTTGGTTTGTTCGGTGGTGCGGGTGTTGGTAAAACAGTT
AACATGATGGAACTGATTAACAACATCGCTAAAGCCCACTCGGGTCTTTCTGTATTCGCCGGTGTAGGTGAACGTACTCG
TGAAGGTAACGACTTCTACTACGAGATGAAAGATTCTGGCGTTCTCGACAAAGTGGCCATGGTTTATGGTCAGATGAACG
AGCCTCCAGGTAACCGTTTGCGCGTTGCACTGTCTGGTCTGACTATGGCAGAGAAGTTCCGTGACGAAGGTCGTGACGTA
CTGTTGTTCGTTGACAACATCTACCGTTATACCTTAGCCGGTACTGAAGTATCTGCACTGTTAGGTCGTATGCCTTCTGC
GGTAGGTTATCAACCAACATTGGCTGAAGAGATGGGCGTTCTGCAAGAGCGTATCACTTCAACTAAGACTGGTTCTATTA
CCTCTGTACAAGCGGTATACGTACCTGCGGATGACTTGACCGATCCGTCACCAGCAACAACCTTCGCTCACTTAGATGCG
ACTGTTGTACTGTCACGTCAAATTGCTTCTCTGGGTATTTACCCAGCGGTTGACCCATTGGATTCGACTTCACGTCAATT
AGATCCATTGGTTGTTGGCCAAGAGCATTATGATGTTGCTAACGGCGTGCAAACTGTACTGCAACGTTACAAAGAGCTGA
AAGACATTATTGCGATTCTGGGTATGGATGAATTGTCTGATGAAGACAAAACAACTGTATTCCGTGCTCGTAAGATTGAG
CGTTTCTTATCTCAGCCTTTCTTCGTAGCAGAAGTCTTTACTGGATCTCCTGGTAAGTACGTTTCTCTGAAAGACACTAT
CCGTGGCTTTAAGGGTATTTTGAACGGTGAGTTTGATCACCTGCCAGAACAAGCGTTCTACATGGTTGGCTCAATCGATG
AAGTCATCGAGAAAGCGAACAAAAAGAAATAA

Upstream 100 bases:

>100_bases
AGGCCCGTCAGGCTGCGATTACGCAAGAACTGTCGGAAATTGTTTCTGGTGCCTCTGCGGTTTAGGTTAGGTAACGAATA
CAAGTTTTAGAGGATTAATC

Downstream 100 bases:

>100_bases
CTAAGTAGCAATATTTAGTTTCTTAAGGAGAACGGGATGGCAGCCATGACAGTACATCTTGATATAGTAAGTGCAGAGAG
CAAAATCTTCTCTGGTCGTG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta 1; F-ATPase subunit beta 1 [H]

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCNGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPITV
PVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTV
NMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDV
LLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA
TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIE
RFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGILNGEFDHLPEQAFYMVGSIDEVIEKANKKK

Sequences:

>Translated_463_residues
MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCNGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPITV
PVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTV
NMMELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDV
LLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA
TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIE
RFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGILNGEFDHLPEQAFYMVGSIDEVIEKANKKK
>Mature_462_residues
STGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCNGLVLEVQQQLGGGVVRTIAMGSSDGLRRGLEVVNSGSPITVP
VGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVN
MMELINNIAKAHSGLSVFAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVL
LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT
VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIER
FLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGILNGEFDHLPEQAFYMVGSIDEVIEKANKKK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=467, Percent_Identity=69.593147751606, Blast_Score=645, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=322, Percent_Identity=27.0186335403727, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI19913428, Length=403, Percent_Identity=26.302729528536, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI19913426, Length=396, Percent_Identity=25.5050505050505, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI50345984, Length=419, Percent_Identity=24.1050119331742, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4757810, Length=419, Percent_Identity=24.1050119331742, Blast_Score=101, Evalue=1e-21,
Organism=Escherichia coli, GI1790170, Length=461, Percent_Identity=86.3340563991323, Blast_Score=809, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=355, Percent_Identity=30.1408450704225, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1790172, Length=382, Percent_Identity=25.6544502617801, Blast_Score=121, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25144756, Length=467, Percent_Identity=68.3083511777302, Blast_Score=636, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17510931, Length=349, Percent_Identity=26.0744985673352, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17565854, Length=325, Percent_Identity=27.3846153846154, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=367, Percent_Identity=24.7956403269755, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71988063, Length=367, Percent_Identity=24.7956403269755, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17570191, Length=349, Percent_Identity=25.5014326647564, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71988074, Length=328, Percent_Identity=24.0853658536585, Blast_Score=90, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322581, Length=460, Percent_Identity=69.1304347826087, Blast_Score=638, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=385, Percent_Identity=25.7142857142857, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6319370, Length=368, Percent_Identity=25.5434782608696, Blast_Score=106, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6320016, Length=233, Percent_Identity=27.0386266094421, Blast_Score=83, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24638766, Length=466, Percent_Identity=68.4549356223176, Blast_Score=632, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=465, Percent_Identity=64.3010752688172, Blast_Score=589, Evalue=1e-168,
Organism=Drosophila melanogaster, GI20129479, Length=337, Percent_Identity=27.299703264095, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI281361666, Length=387, Percent_Identity=25.5813953488372, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24646341, Length=387, Percent_Identity=25.5813953488372, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI17136796, Length=387, Percent_Identity=25.5813953488372, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24583992, Length=305, Percent_Identity=27.5409836065574, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24583988, Length=324, Percent_Identity=26.5432098765432, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583986, Length=324, Percent_Identity=26.5432098765432, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583984, Length=324, Percent_Identity=26.5432098765432, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24658560, Length=331, Percent_Identity=24.4712990936556, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638768, Length=94, Percent_Identity=52.1276595744681, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 49907; Mature: 49775

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCNGLVLEVQQQLGGGVVRTIAMG
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECC
SSDGLRRGLEVVNSGSPITVPVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYE
CCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCC
DQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFA
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEC
GVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDV
CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEE
LLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVY
EEEEECCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
VPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCHHHHHH
NGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIERFLSQPFFVAEVFTGSPGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCE
VSLKDTIRGFKGILNGEFDHLPEQAFYMVGSIDEVIEKANKKK
EEHHHHHHHHHHHCCCCHHCCCHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
STGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCNGLVLEVQQQLGGGVVRTIAMG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECC
SSDGLRRGLEVVNSGSPITVPVGTATLGRIMNVLGEPIDEAGPIGEEERYVIHRTAPSYE
CCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCHHCCCCCCCCCEEEEECCCCCC
DQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFA
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEC
GVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDV
CCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEE
LLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVY
EEEEECCEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
VPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCHHHHHH
NGVQTVLQRYKELKDIIAILGMDELSDEDKTTVFRARKIERFLSQPFFVAEVFTGSPGKY
HHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCE
VSLKDTIRGFKGILNGEFDHLPEQAFYMVGSIDEVIEKANKKK
EEHHHHHHHHHHHCCCCHHCCCHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA