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The map label for this gene is elbB [H]

Identifier: 160877585

GI number: 160877585

Start: 5295731

End: 5296393

Strand: Reverse

Name: elbB [H]

Synonym: Sbal195_4484

Alternate gene names: 160877585

Gene position: 5296393-5295731 (Counterclockwise)

Preceding gene: 160877587

Following gene: 160877579

Centisome position: 99.05

GC content: 48.42

Gene sequence:

>663_bases
ATGAAAAAAGTCGCAGTGTTACTGAGTGGATGCGGTGTTTTCGATGGAACAGAGATCCATGAATCGGTTTTAACGCTTTT
ATGCTTATCCAAAGCGGGGGCTCACTACCAATGTTTTGCACCTGATATCAAACAGATGCATGTGGTCGATCACCTCACTG
GCGAGGTCGATGCGACAGCTAGTCGTAATGTGCTGGTGGAGTCGGCGCGCATTGCCCGTGGCGAAGTTAAAGCGACCACA
GAATTAGCTATCGCCGAATTTGATGCCTTGATCATTCCCGGTGGTTTTGGGGCGGCGAAAAATTTGTGTAATTTTGCGAC
GAACGGCAGCGAGTGTGAAGTAGATCCGCTGGTGACTGATTTTATCAATGAGTTCATTCTGGCGAAAAAGCCCGTTGGCT
TTATCTGTATCGCACCTATGATGATCCCGCGTTTATATCCCCATGGCGTAAAAGGCACTATTGGTAATGATAGCGATACT
GTTGCGGCGTTCAATTTGATGGGTGGAGAGCATCAAGTCGCGACTGTGCATGAGATCGTCGTAGATGAAGCGAATCGAAT
TGTCAGCACTCCCGCTTATATGTTGGCTGGAAGTATTGCTGAAGCGCATTCAGGCATCGAGAAGCTGGTTGCTAAGGTAC
TGGAGATGACTGACGCGCGTTAG

Upstream 100 bases:

>100_bases
CCCGTCAGATTCGACGAATTAAGTTAGCACGATTTTTAATCAGATCAACTAGTTTGTTTGTAGTTTGTTAAAACTTAATG
ACATAAGAAGGATATTTTTA

Downstream 100 bases:

>100_bases
GTTTGTAGAAGTGTAAGAGCACGTCATTGAACCAAGATAAATCCCCATGCGTTCTTCTGGATTTATCTTGGTATAACGGG
ATTAGACTGAGCTTGAGGAC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIKQMHVVDHLTGEVDATASRNVLVESARIARGEVKATT
ELAIAEFDALIIPGGFGAAKNLCNFATNGSECEVDPLVTDFINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDT
VAAFNLMGGEHQVATVHEIVVDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTDAR

Sequences:

>Translated_220_residues
MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIKQMHVVDHLTGEVDATASRNVLVESARIARGEVKATT
ELAIAEFDALIIPGGFGAAKNLCNFATNGSECEVDPLVTDFINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDT
VAAFNLMGGEHQVATVHEIVVDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTDAR
>Mature_220_residues
MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIKQMHVVDHLTGEVDATASRNVLVESARIARGEVKATT
ELAIAEFDALIIPGGFGAAKNLCNFATNGSECEVDPLVTDFINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDT
VAAFNLMGGEHQVATVHEIVVDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTDAR

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=224, Percent_Identity=46.4285714285714, Blast_Score=199, Evalue=1e-51,
Organism=Homo sapiens, GI296531408, Length=224, Percent_Identity=41.0714285714286, Blast_Score=158, Evalue=3e-39,
Organism=Escherichia coli, GI87082228, Length=214, Percent_Identity=57.0093457943925, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23379; Mature: 23379

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIKQMHVVDHLTGEVDATA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCC
SRNVLVESARIARGEVKATTELAIAEFDALIIPGGFGAAKNLCNFATNGSECEVDPLVTD
CCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCEECHHHHH
FINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDTVAAFNLMGGEHQVATVHEIV
HHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
VDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTDAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVAVLLSGCGVFDGTEIHESVLTLLCLSKAGAHYQCFAPDIKQMHVVDHLTGEVDATA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCC
SRNVLVESARIARGEVKATTELAIAEFDALIIPGGFGAAKNLCNFATNGSECEVDPLVTD
CCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCEECHHHHH
FINEFILAKKPVGFICIAPMMIPRLYPHGVKGTIGNDSDTVAAFNLMGGEHQVATVHEIV
HHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH
VDEANRIVSTPAYMLAGSIAEAHSGIEKLVAKVLEMTDAR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]