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The map label for this gene is arnC [H]

Identifier: 160877568

GI number: 160877568

Start: 5277407

End: 5278165

Strand: Reverse

Name: arnC [H]

Synonym: Sbal195_4467

Alternate gene names: 160877568

Gene position: 5278165-5277407 (Counterclockwise)

Preceding gene: 160877571

Following gene: 160877567

Centisome position: 98.71

GC content: 50.2

Gene sequence:

>759_bases
GTGGTCATAAAGTTGTGGAGTGTTGAATTGATCTCTATTGTGATCCCCGCTAAAGATGAGGTGGGCAATATTGGCCCCCT
GATGGAAGAGATATGCCAAGCCCTCCAAGGTTTGACTGAGTTTGAAATCCTTGTCGTAGATGATGGCAGCCAAGACGATA
CCTTTGGTGAAGTGATGCGTACCGCAGCTGAACAGCAATGTGATGCGAAAGCGATTCGCCATGAGCTAAGCACTGGGCAG
AGTACCGCTATTTCGACTGGCGTTTTGCACGCGCGCGGCAAATATATTGTGACCTTAGATGCTGATGGCCAGAATGATCC
CGCCGATATTCCTGCCATGCTAGCCCAGTTACCGCAGATTAATGCCGAGCATTTCTGTATTGCGGGCTACCGTAAAAATC
GTAAAGACACGGCCTGGAAGCGATTCCAGTCTCGCTTTGCGAATAAGGTTCGCGATGCACTCCTTCAAGACGGTGTACCT
GATACGGGCTGCGGCCTTAAGTTATTTCCCCGTGAAACCTTCCTTCGCTTGCCCAGTTTCGACCATATGCACAGATACAT
TCCTGCCCTAGTACGGCGTATGGGCGGTGAGATTTTTATTTCGGTGGTGAATCATAGGGACCGTCAAGTGGGTATCTCTA
AGTACACAGCTTGGAATCGCGTCTGGGTTGGTATCGTCGATATTGTGGGGGTGATCTGGCTAGGTCGTAGAGCTAAAGTT
GCCAAGGTTGCACGCAGTGAATCGAACTGGCGCGACTAA

Upstream 100 bases:

>100_bases
ATTGTTTGGCCAGTTTATAATTCTGAATTAGTGTTTTTTTTGCCAATCATCCCTATTTTTCCAGATTTTAATTTTGCAAT
AATCATGTGATACTGTATTT

Downstream 100 bases:

>100_bases
AATGAAGCGATTCTATAAGGCGATATTTATCGTCTGTATTTTGTTGGTGTTGATGCTTGCCGCCCAACAGGGATTATTCG
AGCACGTTACCGATAGCAAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MVIKLWSVELISIVIPAKDEVGNIGPLMEEICQALQGLTEFEILVVDDGSQDDTFGEVMRTAAEQQCDAKAIRHELSTGQ
STAISTGVLHARGKYIVTLDADGQNDPADIPAMLAQLPQINAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLQDGVP
DTGCGLKLFPRETFLRLPSFDHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRVWVGIVDIVGVIWLGRRAKV
AKVARSESNWRD

Sequences:

>Translated_252_residues
MVIKLWSVELISIVIPAKDEVGNIGPLMEEICQALQGLTEFEILVVDDGSQDDTFGEVMRTAAEQQCDAKAIRHELSTGQ
STAISTGVLHARGKYIVTLDADGQNDPADIPAMLAQLPQINAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLQDGVP
DTGCGLKLFPRETFLRLPSFDHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRVWVGIVDIVGVIWLGRRAKV
AKVARSESNWRD
>Mature_252_residues
MVIKLWSVELISIVIPAKDEVGNIGPLMEEICQALQGLTEFEILVVDDGSQDDTFGEVMRTAAEQQCDAKAIRHELSTGQ
STAISTGVLHARGKYIVTLDADGQNDPADIPAMLAQLPQINAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLQDGVP
DTGCGLKLFPRETFLRLPSFDHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRVWVGIVDIVGVIWLGRRAKV
AKVARSESNWRD

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=216, Percent_Identity=27.3148148148148, Blast_Score=94, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI25146207, Length=203, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28271; Mature: 28271

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIKLWSVELISIVIPAKDEVGNIGPLMEEICQALQGLTEFEILVVDDGSQDDTFGEVMR
CEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH
TAAEQQCDAKAIRHELSTGQSTAISTGVLHARGKYIVTLDADGQNDPADIPAMLAQLPQI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHCCCC
NAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLQDGVPDTGCGLKLFPRETFLRLPSF
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCH
DHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRVWVGIVDIVGVIWLGRRAKV
HHHHHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AKVARSESNWRD
HHHHHCCCCCCC
>Mature Secondary Structure
MVIKLWSVELISIVIPAKDEVGNIGPLMEEICQALQGLTEFEILVVDDGSQDDTFGEVMR
CEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH
TAAEQQCDAKAIRHELSTGQSTAISTGVLHARGKYIVTLDADGQNDPADIPAMLAQLPQI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHCCCC
NAEHFCIAGYRKNRKDTAWKRFQSRFANKVRDALLQDGVPDTGCGLKLFPRETFLRLPSF
CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCH
DHMHRYIPALVRRMGGEIFISVVNHRDRQVGISKYTAWNRVWVGIVDIVGVIWLGRRAKV
HHHHHHHHHHHHHCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AKVARSESNWRD
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]