Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877571
Identifier: 160877571
GI number: 160877571
Start: 5280633
End: 5282108
Strand: Reverse
Name: 160877571
Synonym: Sbal195_4470
Alternate gene names: NA
Gene position: 5282108-5280633 (Counterclockwise)
Preceding gene: 160877572
Following gene: 160877568
Centisome position: 98.78
GC content: 46.34
Gene sequence:
>1476_bases ATGAAGGCTTTTTTAACCCCCACGATCCTTGCTACTAGCATTGCCTCTGGCCTATTTTTTTCTTCAATACTTGCCGCTGC ACCTTGGGTTGATGCCTCTGATATTTATCTTAGAGCGGATATTCAAGCGTTGGCCGATGCGGGAGTGATCACTGTTCCTG TGAATACTTACCCCTTGATGTGGTCAGGAATTGGCGGTGATCTAGCGAAAGTTGAGCCTGAACTGCTGTCGCCTTTTTTA GTACAAGCTTATGCTCGGGTTAACTTTTATTATCAAAGTGCCGTCGATAATCGCGGTAATGCGCGGATAAAAGTGTCGGC AGCGTCTGATCCTGCTCGCTTTCAACATTATGGTTCCGACTATCGCGAAAAAGGAGAAGTGCTGGGGTCTTACGAATATT TAGGGTCACGTGTTGCCTATAAGGCGACGGTGGCAGAAACCTATGATCCGCAAGATAATAAAAATTTTCGCCTCGATGAG TCATATTTTGCCATCATTTTAGGTAATTGGATTGCGACCTTAGGTTCGGTTGAACAGTGGTGGGGGCCTGGATTTGACTC TGCATTGCACCGTTCTAATAACGCTCGCCCTATGCAGTCGCTAACGCTGAGCCGCAATAATGCCGCAGCCTTTGAAACGC CTTGGTTATCTTGGATTGGTCCTTGGACATTTAAAACCGGATTTAGCTTAACGGAAGTTGATCGTGCTGTGCCTAAAACG GCTGAGTGGGATATGCGCTTAAGTGCAAGACCGATTAAGCAGCTAGAAGTGGGTCTGTCGTGGTCGACATTGTTTTGCGG AGAGGGCCAAGATTGTAACTTCAACTTTTGGTGGGATTCGGTTGCCAGCAACTCAGTTTGCCTCGATGGTACAAGTGATT GCGCGCCAGAAGAGCGCCGCGATGCAGGCCATAGAACCCAAAGTATCGATATGCGCTATACCAGCTCATGGCAGGATATT CCTGTGGGATTATATCTCGAACATAGTTGTGAGAATGGCAGCGACTGTGGCTCACTTTGGGGGATTGATACCAATTTTGG CACATCGGGTAAGCAGTTTAAGCTGTTTATGGAATATTCAGACACCTATGTAAAATGTGATGGCGATAGTGCCAATTGCT TCTATGAAGATCCTGTCTATCTTAGTGGTTCTCGTTATTATGGCCGTGCTTTAGGCTCAACCTATGATAGCGATGCTCAA ACGTTTGTGGTGGGATTAGTCGGCCAGTTTAGTAACAGCCGAGGTTTTACCTCTTTATTGCGTTATGCGAAGTTGAATAA AGATGGCACTAATGTGGCGAGCACTTGGGCGCCACAACCACCGAAGGAAGATTTGTTGATGCTTGAGCTTTCTTACCGTA TGCCTGTATGGAAAGGCATGTGGAGCTTAGGTGGAACGGTATCGAGATCGGAATTTGATGTTCAAGAAAACGATACTAAT GCCACGCTCTTTAGCAGTTTTGAGTATCGCTTCTAA
Upstream 100 bases:
>100_bases TAAACCTTAGATTTTACCTGCGTACCTGATGGTTTTTACGTAGGCGTTTTGTGTTAACTTTGAGGCATTGTGGCCTCGCG ATGATACTTAAAAGGATGTT
Downstream 100 bases:
>100_bases CATTCATGATTAAAGCAAAGGCCTGCATTCTTGCAGGCCTTTTTGTTTGTCTTTTGGGCGCTAACTTATTTGTTATAGAA CTGGCGATACCAGTCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQALADAGVITVPVNTYPLMWSGIGGDLAKVEPELLSPFL VQAYARVNFYYQSAVDNRGNARIKVSAASDPARFQHYGSDYREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDE SYFAIILGNWIATLGSVEQWWGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSWIGPWTFKTGFSLTEVDRAVPKT AEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNFWWDSVASNSVCLDGTSDCAPEERRDAGHRTQSIDMRYTSSWQDI PVGLYLEHSCENGSDCGSLWGIDTNFGTSGKQFKLFMEYSDTYVKCDGDSANCFYEDPVYLSGSRYYGRALGSTYDSDAQ TFVVGLVGQFSNSRGFTSLLRYAKLNKDGTNVASTWAPQPPKEDLLMLELSYRMPVWKGMWSLGGTVSRSEFDVQENDTN ATLFSSFEYRF
Sequences:
>Translated_491_residues MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQALADAGVITVPVNTYPLMWSGIGGDLAKVEPELLSPFL VQAYARVNFYYQSAVDNRGNARIKVSAASDPARFQHYGSDYREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDE SYFAIILGNWIATLGSVEQWWGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSWIGPWTFKTGFSLTEVDRAVPKT AEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNFWWDSVASNSVCLDGTSDCAPEERRDAGHRTQSIDMRYTSSWQDI PVGLYLEHSCENGSDCGSLWGIDTNFGTSGKQFKLFMEYSDTYVKCDGDSANCFYEDPVYLSGSRYYGRALGSTYDSDAQ TFVVGLVGQFSNSRGFTSLLRYAKLNKDGTNVASTWAPQPPKEDLLMLELSYRMPVWKGMWSLGGTVSRSEFDVQENDTN ATLFSSFEYRF >Mature_491_residues MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQALADAGVITVPVNTYPLMWSGIGGDLAKVEPELLSPFL VQAYARVNFYYQSAVDNRGNARIKVSAASDPARFQHYGSDYREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDE SYFAIILGNWIATLGSVEQWWGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSWIGPWTFKTGFSLTEVDRAVPKT AEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNFWWDSVASNSVCLDGTSDCAPEERRDAGHRTQSIDMRYTSSWQDI PVGLYLEHSCENGSDCGSLWGIDTNFGTSGKQFKLFMEYSDTYVKCDGDSANCFYEDPVYLSGSRYYGRALGSTYDSDAQ TFVVGLVGQFSNSRGFTSLLRYAKLNKDGTNVASTWAPQPPKEDLLMLELSYRMPVWKGMWSLGGTVSRSEFDVQENDTN ATLFSSFEYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54798; Mature: 54798
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQALADAGVITVPVNTYPLM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEEEEECCCCEEE WSGIGGDLAKVEPELLSPFLVQAYARVNFYYQSAVDNRGNARIKVSAASDPARFQHYGSD EECCCCCHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCHHHHHCCCC YREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDESYFAIILGNWIATLGSVEQW HHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCCEEECCCEEEEEHHHHHHHHCCHHHH WGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSWIGPWTFKTGFSLTEVDRAVPKT CCCCHHHHHHCCCCCCCHHHEEECCCCCCEECCCCHHHCCCEEECCCCCHHHHHHHCCCC AEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNFWWDSVASNSVCLDGTSDCAPEERR CCCCCEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCHHHH DAGHRTQSIDMRYTSSWQDIPVGLYLEHSCENGSDCGSLWGIDTNFGTSGKQFKLFMEYS HCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC DTYVKCDGDSANCFYEDPVYLSGSRYYGRALGSTYDSDAQTFVVGLVGQFSNSRGFTSLL CCEEEECCCCCCEEECCCEEECCCCHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHH RYAKLNKDGTNVASTWAPQPPKEDLLMLELSYRMPVWKGMWSLGGTVSRSEFDVQENDTN HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCC ATLFSSFEYRF EEEEECCCCCC >Mature Secondary Structure MKAFLTPTILATSIASGLFFSSILAAAPWVDASDIYLRADIQALADAGVITVPVNTYPLM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCEEEEECCCCEEE WSGIGGDLAKVEPELLSPFLVQAYARVNFYYQSAVDNRGNARIKVSAASDPARFQHYGSD EECCCCCHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCHHHHHCCCC YREKGEVLGSYEYLGSRVAYKATVAETYDPQDNKNFRLDESYFAIILGNWIATLGSVEQW HHHHHHHCCCHHHHCCCEEEEEEEECCCCCCCCCCEEECCCEEEEEHHHHHHHHCCHHHH WGPGFDSALHRSNNARPMQSLTLSRNNAAAFETPWLSWIGPWTFKTGFSLTEVDRAVPKT CCCCHHHHHHCCCCCCCHHHEEECCCCCCEECCCCHHHCCCEEECCCCCHHHHHHHCCCC AEWDMRLSARPIKQLEVGLSWSTLFCGEGQDCNFNFWWDSVASNSVCLDGTSDCAPEERR CCCCCEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCHHHH DAGHRTQSIDMRYTSSWQDIPVGLYLEHSCENGSDCGSLWGIDTNFGTSGKQFKLFMEYS HCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC DTYVKCDGDSANCFYEDPVYLSGSRYYGRALGSTYDSDAQTFVVGLVGQFSNSRGFTSLL CCEEEECCCCCCEEECCCEEECCCCHHHHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHH RYAKLNKDGTNVASTWAPQPPKEDLLMLELSYRMPVWKGMWSLGGTVSRSEFDVQENDTN HHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCC ATLFSSFEYRF EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]