Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877547
Identifier: 160877547
GI number: 160877547
Start: 5254088
End: 5254825
Strand: Reverse
Name: 160877547
Synonym: Sbal195_4446
Alternate gene names: NA
Gene position: 5254825-5254088 (Counterclockwise)
Preceding gene: 160877548
Following gene: 160877546
Centisome position: 98.27
GC content: 52.17
Gene sequence:
>738_bases ATGAAAAATTGGCTGATTTGTATCGACGATACCGATGATATCGGCACTAAGGGCACGGGCGAAATTGCCGAGGAAATCGC CCATCTGCTCGCGAATATGTCGGGCGGCCATGCTTCCTTTGTGACGCGGCATCAATTGTTTGTGCACCCCGATATTCCTT ATACCTCACATAATAGTGCCATGTGTTTTGCGCTGCGCTCGCCACTGACGCAGGCCGAGATCCACCAACATGCCGTTGCG CATTTGGTTGCGGAATCGGCTCCCGCTGCCGATCCTGGCATCGCCATACTCGATGTTGACTCTCACTATGATGCCGCGGC TTTAATGGATTTTGGTCGCAGAGCCAAGGTTGAAGTGATCACGAAAGCGGCGGCCTATGATTTGGCTGAACAACTTAATA TTCAGCTGACCGAACATGGCGGCACAGGCCAAGGTGTTATTGGTGCGTTAGCGGGATTAGGGCTACGTTTGATGGGCAGC GACGGCCGGGGAAAAGGCCAGATTAAACTTGGCCAATTTGAGGATGTTTCACTCGAACTCAGCGTTGCCGATATCCTCGA ACAAACCGGACTTGATGCTGTGATGAGCATGGACAAGTATCGACTTGCGCTTGATGAGCGAGTGCAGCTGAAGGGCAAAG TGAAAGCCGTATACCTTGATCACCAGTTTGTCTTGCTCGTTCATCAAGAGGCAGAGCAATGGCGCAATGCGGGCAAGCAA GCTCTGCAAGCCTACTAG
Upstream 100 bases:
>100_bases GCGCCTTGCTTGTACCGCCTGTGTTGACGCGATTAAAAGCCCACGACCTGTTACACCGTGACAAATTTTAAAAACCTTTT TAAAGCTTTAGGAAATGCAG
Downstream 100 bases:
>100_bases AGCAAGTTTAGTAAAAGAGTTTAAAAAGAGAGTGCTAAATGGATCTCAACTTGGTCGAACACGCATTTGAATTAAAGGAT GACCGCTGGATTTTTAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRHQLFVHPDIPYTSHNSAMCFALRSPLTQAEIHQHAVA HLVAESAPAADPGIAILDVDSHYDAAALMDFGRRAKVEVITKAAAYDLAEQLNIQLTEHGGTGQGVIGALAGLGLRLMGS DGRGKGQIKLGQFEDVSLELSVADILEQTGLDAVMSMDKYRLALDERVQLKGKVKAVYLDHQFVLLVHQEAEQWRNAGKQ ALQAY
Sequences:
>Translated_245_residues MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRHQLFVHPDIPYTSHNSAMCFALRSPLTQAEIHQHAVA HLVAESAPAADPGIAILDVDSHYDAAALMDFGRRAKVEVITKAAAYDLAEQLNIQLTEHGGTGQGVIGALAGLGLRLMGS DGRGKGQIKLGQFEDVSLELSVADILEQTGLDAVMSMDKYRLALDERVQLKGKVKAVYLDHQFVLLVHQEAEQWRNAGKQ ALQAY >Mature_245_residues MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRHQLFVHPDIPYTSHNSAMCFALRSPLTQAEIHQHAVA HLVAESAPAADPGIAILDVDSHYDAAALMDFGRRAKVEVITKAAAYDLAEQLNIQLTEHGGTGQGVIGALAGLGLRLMGS DGRGKGQIKLGQFEDVSLELSVADILEQTGLDAVMSMDKYRLALDERVQLKGKVKAVYLDHQFVLLVHQEAEQWRNAGKQ ALQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26533; Mature: 26533
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRHQLFVHPDIPYTSHNSA CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCE MCFALRSPLTQAEIHQHAVAHLVAESAPAADPGIAILDVDSHYDAAALMDFGRRAKVEVI EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHHH TKAAAYDLAEQLNIQLTEHGGTGQGVIGALAGLGLRLMGSDGRGKGQIKLGQFEDVSLEL HHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCEEEE SVADILEQTGLDAVMSMDKYRLALDERVQLKGKVKAVYLDHQFVLLVHQEAEQWRNAGKQ HHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCEEEEEEEHHHHHHHHHHHH ALQAY HHHCC >Mature Secondary Structure MKNWLICIDDTDDIGTKGTGEIAEEIAHLLANMSGGHASFVTRHQLFVHPDIPYTSHNSA CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCE MCFALRSPLTQAEIHQHAVAHLVAESAPAADPGIAILDVDSHYDAAALMDFGRRAKVEVI EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHHHH TKAAAYDLAEQLNIQLTEHGGTGQGVIGALAGLGLRLMGSDGRGKGQIKLGQFEDVSLEL HHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCEEEECCCCCCCCCEEECCCCCCEEEE SVADILEQTGLDAVMSMDKYRLALDERVQLKGKVKAVYLDHQFVLLVHQEAEQWRNAGKQ HHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCEEEEEEEHHHHHHHHHHHH ALQAY HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA