Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877548
Identifier: 160877548
GI number: 160877548
Start: 5254855
End: 5255397
Strand: Reverse
Name: 160877548
Synonym: Sbal195_4447
Alternate gene names: NA
Gene position: 5255397-5254855 (Counterclockwise)
Preceding gene: 160877549
Following gene: 160877547
Centisome position: 98.28
GC content: 49.54
Gene sequence:
>543_bases ATGACTAAAAAAATCCCGCTGAGTCTACAAGACTCCTTATTTGTCGGCTTTTGCGCAACCTTGCTGGTGGCATTAACGGG CATGTTAAGGCTTAAGTTGGGTTTGTCTGGTCACAGCATGTTCCTGATGAGCTTCTTTTATCTGATCTGTTATGGCGTGT TAGGTCGTTTCGGCAGCATGACGGCATGCGGTGTTATCGCGGGCATAGTTGCCATGGCTTTAGGCGTAGGTAAAGGTGGG CCTATGATTTTACTGAAGTTTGCCTTGCCTGCCATTGCAATGGATCTCGTCGCCTTACTCTTGCCGCTCAGTATGAACTT GCATTGGCGCTGCGTGATCTTAGGCATTGCAGGCTGTATCGCTTGGGCAGGTAAAGTGGCACTCACCAATATGCTCGCGG GCATGGCGCTGGATGTCGTGTTGATTCAATGGGGCTTGAGTGTATTAAAAGGCGGCTTTTTTGCCACTCTGGGCGCCTTG CTTGTACCGCCTGTGTTGACGCGATTAAAAGCCCACGACCTGTTACACCGTGACAAATTTTAA
Upstream 100 bases:
>100_bases CAATTACTTAAATTATCTCGCCAGATGGCCGTTGCAGCGCAGAGCCGTCACTTTGGTTTAGCGCAACGGCCAACACATTG GCATTCACCGAGAGACAAAA
Downstream 100 bases:
>100_bases AAACCTTTTTAAAGCTTTAGGAAATGCAGATGAAAAATTGGCTGATTTGTATCGACGATACCGATGATATCGGCACTAAG GGCACGGGCGAAATTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMSFFYLICYGVLGRFGSMTACGVIAGIVAMALGVGKGG PMILLKFALPAIAMDLVALLLPLSMNLHWRCVILGIAGCIAWAGKVALTNMLAGMALDVVLIQWGLSVLKGGFFATLGAL LVPPVLTRLKAHDLLHRDKF
Sequences:
>Translated_180_residues MTKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMSFFYLICYGVLGRFGSMTACGVIAGIVAMALGVGKGG PMILLKFALPAIAMDLVALLLPLSMNLHWRCVILGIAGCIAWAGKVALTNMLAGMALDVVLIQWGLSVLKGGFFATLGAL LVPPVLTRLKAHDLLHRDKF >Mature_179_residues TKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMSFFYLICYGVLGRFGSMTACGVIAGIVAMALGVGKGGP MILLKFALPAIAMDLVALLLPLSMNLHWRCVILGIAGCIAWAGKVALTNMLAGMALDVVLIQWGLSVLKGGFFATLGALL VPPVLTRLKAHDLLHRDKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19119; Mature: 18988
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMSFFYLICYGVLGRFGSM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH TACGVIAGIVAMALGVGKGGPMILLKFALPAIAMDLVALLLPLSMNLHWRCVILGIAGCI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AWAGKVALTNMLAGMALDVVLIQWGLSVLKGGFFATLGALLVPPVLTRLKAHDLLHRDKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKKIPLSLQDSLFVGFCATLLVALTGMLRLKLGLSGHSMFLMSFFYLICYGVLGRFGSM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH TACGVIAGIVAMALGVGKGGPMILLKFALPAIAMDLVALLLPLSMNLHWRCVILGIAGCI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AWAGKVALTNMLAGMALDVVLIQWGLSVLKGGFFATLGALLVPPVLTRLKAHDLLHRDKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA