BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is hflB [C]

Identifier: 160877518

GI number: 160877518

Start: 5217409

End: 5218392

Strand: Reverse

Name: hflB [C]

Synonym: Sbal195_4417

Alternate gene names: 160877518

Gene position: 5218392-5217409 (Counterclockwise)

Preceding gene: 160877534

Following gene: 160877517

Centisome position: 97.59

GC content: 36.48

Gene sequence:

>984_bases
ATGGCCAGTTCAGAACAACTTAAAGCTCTAGTTAGCTCACACATTGAAAAGGACGACGATCGATTTTTATCGTTAACCTT
GCAAGTTGCTGCGCACGAAGCAAGGAGTGGCCACGGGCGTTTAGCTCAAGAGTTGAGAGATATAGTAGAACAAGCTAAAA
AGGTATCCCTTAAGAACTTACCTATTTCTATAGCAAAAAGCATAAAAGATACCAATGGTCTGCTTTTTACTAGCCATCCC
AAAGAAAAGCTGAATAATTTAACAGCTCCTGTCGAGTTAAAAGACCAATTAAAACGTCTAATTAGAGAACAAAGGCACAT
GGTAAAGCTAAAAAATCATGGTCTTTCACCCAGACGAAAAATCTTATTAGTTGGTCCGCCTGGCACAGGTAAAACATATA
CAGCCTCAATTCTTGCAGGAGAGCTAGATTATCCTCTTTTTCAAGTGAGGCTGGATGGTATACTCACCAAATTTATGGGT
GAATCTGCTGCAAAATTACGACAAGTTTTTGATGCTATAAATGAAGTTCGTGGAGTATATTTTTTTGATGAATTTGACGC
TCTTGGTTCACATCGTTCTTCAACAAACGATGTGGGCGAAGCTCGACGAATTTTAAATAGTTTTTTACAAATGATTGAAC
AGGATGATTCAAATAGCGTTATCGTATGTGCAACCAACCATATGGAAATTCTTGATCATGCACTATTCCGCAGGTTTGAT
GATGTAATACATTATCAACTTCCTGATGATAGTGAGATTATTACTCTTTTAAAAAACAAACTTATGCCTTTTGTTGCAAA
AAGTTTTGGTTGGAATAAGCTACCAGAGCAAGCTAGAGGACTAAGTAGCGCAGAAATAACTCGTGCCTCTGATGATGCAA
TAAAAGAAATGTTAATTAATGGATTACCTAGAGTCACTGCTTCGATCCTAATTAAATCAATCAAAGAAAGATACAAAATG
AGTCAGCATTTAAATAAAAAATAA

Upstream 100 bases:

>100_bases
CGCGTTTGAGTAGCAAGACAATCTCTTGAAAAAGCTGTATCATCGTATCATTAGCAATACAATTTGCAATTTAACTATAT
AAAACAATGAAGTAGCGAAA

Downstream 100 bases:

>100_bases
GGATGTTAAATGTCTTTAAATAATGGAGCGAAGCCTCATATATTTCTTGGAAGAAATGGTACATCCTTACCATATACTTA
TCCTAAAAAGGTTATTATAA

Product: ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MASSEQLKALVSSHIEKDDDRFLSLTLQVAAHEARSGHGRLAQELRDIVEQAKKVSLKNLPISIAKSIKDTNGLLFTSHP
KEKLNNLTAPVELKDQLKRLIREQRHMVKLKNHGLSPRRKILLVGPPGTGKTYTASILAGELDYPLFQVRLDGILTKFMG
ESAAKLRQVFDAINEVRGVYFFDEFDALGSHRSSTNDVGEARRILNSFLQMIEQDDSNSVIVCATNHMEILDHALFRRFD
DVIHYQLPDDSEIITLLKNKLMPFVAKSFGWNKLPEQARGLSSAEITRASDDAIKEMLINGLPRVTASILIKSIKERYKM
SQHLNKK

Sequences:

>Translated_327_residues
MASSEQLKALVSSHIEKDDDRFLSLTLQVAAHEARSGHGRLAQELRDIVEQAKKVSLKNLPISIAKSIKDTNGLLFTSHP
KEKLNNLTAPVELKDQLKRLIREQRHMVKLKNHGLSPRRKILLVGPPGTGKTYTASILAGELDYPLFQVRLDGILTKFMG
ESAAKLRQVFDAINEVRGVYFFDEFDALGSHRSSTNDVGEARRILNSFLQMIEQDDSNSVIVCATNHMEILDHALFRRFD
DVIHYQLPDDSEIITLLKNKLMPFVAKSFGWNKLPEQARGLSSAEITRASDDAIKEMLINGLPRVTASILIKSIKERYKM
SQHLNKK
>Mature_326_residues
ASSEQLKALVSSHIEKDDDRFLSLTLQVAAHEARSGHGRLAQELRDIVEQAKKVSLKNLPISIAKSIKDTNGLLFTSHPK
EKLNNLTAPVELKDQLKRLIREQRHMVKLKNHGLSPRRKILLVGPPGTGKTYTASILAGELDYPLFQVRLDGILTKFMGE
SAAKLRQVFDAINEVRGVYFFDEFDALGSHRSSTNDVGEARRILNSFLQMIEQDDSNSVIVCATNHMEILDHALFRRFDD
VIHYQLPDDSEIITLLKNKLMPFVAKSFGWNKLPEQARGLSSAEITRASDDAIKEMLINGLPRVTASILIKSIKERYKMS
QHLNKK

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=213, Percent_Identity=31.924882629108, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI45643125, Length=215, Percent_Identity=34.8837209302326, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI45643123, Length=207, Percent_Identity=35.2657004830918, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI195539395, Length=214, Percent_Identity=29.9065420560748, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI7019569, Length=222, Percent_Identity=28.3783783783784, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI24430151, Length=145, Percent_Identity=33.7931034482759, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI17865802, Length=139, Percent_Identity=36.6906474820144, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4506209, Length=152, Percent_Identity=34.8684210526316, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI157671927, Length=231, Percent_Identity=29.004329004329, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI24497618, Length=204, Percent_Identity=32.3529411764706, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI24497435, Length=190, Percent_Identity=30.5263157894737, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI21361144, Length=167, Percent_Identity=28.1437125748503, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI7657689, Length=223, Percent_Identity=30.0448430493274, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI21327685, Length=223, Percent_Identity=30.4932735426009, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI153792536, Length=207, Percent_Identity=31.8840579710145, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI300192933, Length=241, Percent_Identity=28.6307053941909, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI5901990, Length=230, Percent_Identity=28.2608695652174, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI14149767, Length=200, Percent_Identity=32, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI62177112, Length=200, Percent_Identity=32, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI5729991, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI89064750, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI24430155, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI40806170, Length=143, Percent_Identity=32.8671328671329, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI11875211, Length=143, Percent_Identity=32.8671328671329, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI4505725, Length=152, Percent_Identity=30.9210526315789, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI75677353, Length=146, Percent_Identity=34.9315068493151, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI194018490, Length=161, Percent_Identity=32.9192546583851, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI283436222, Length=153, Percent_Identity=31.3725490196078, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI283436220, Length=153, Percent_Identity=31.3725490196078, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI283436224, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31742536, Length=189, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI112789543, Length=189, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI4507173, Length=183, Percent_Identity=31.6939890710383, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI194018488, Length=125, Percent_Identity=32, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789568, Length=165, Percent_Identity=32.7272727272727, Blast_Score=88, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17532375, Length=258, Percent_Identity=30.6201550387597, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17508053, Length=215, Percent_Identity=32.093023255814, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531535, Length=161, Percent_Identity=37.2670807453416, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71987372, Length=173, Percent_Identity=36.4161849710983, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71987364, Length=173, Percent_Identity=36.4161849710983, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25144278, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17554786, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86561515, Length=183, Percent_Identity=31.6939890710383, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17563248, Length=170, Percent_Identity=34.1176470588235, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=145, Percent_Identity=36.551724137931, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193206116, Length=145, Percent_Identity=36.551724137931, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=145, Percent_Identity=36.551724137931, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71994521, Length=225, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17563250, Length=145, Percent_Identity=32.4137931034483, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25146157, Length=156, Percent_Identity=34.6153846153846, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17537217, Length=225, Percent_Identity=29.3333333333333, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17554264, Length=136, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508701, Length=209, Percent_Identity=24.8803827751196, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508421, Length=179, Percent_Identity=33.5195530726257, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32563584, Length=179, Percent_Identity=33.5195530726257, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71990294, Length=178, Percent_Identity=29.7752808988764, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17505546, Length=191, Percent_Identity=28.2722513089005, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193209502, Length=198, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25153574, Length=198, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17554784, Length=143, Percent_Identity=36.3636363636364, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562804, Length=143, Percent_Identity=31.4685314685315, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI133901658, Length=229, Percent_Identity=28.82096069869, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI133901662, Length=229, Percent_Identity=28.82096069869, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323429, Length=248, Percent_Identity=29.8387096774194, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320077, Length=221, Percent_Identity=30.316742081448, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324000, Length=165, Percent_Identity=33.9393939393939, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322994, Length=154, Percent_Identity=35.7142857142857, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325431, Length=184, Percent_Identity=33.1521739130435, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6322704, Length=173, Percent_Identity=33.5260115606936, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320197, Length=144, Percent_Identity=34.0277777777778, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=172, Percent_Identity=31.9767441860465, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6324833, Length=178, Percent_Identity=32.5842696629214, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=177, Percent_Identity=31.0734463276836, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6321390, Length=191, Percent_Identity=28.7958115183246, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6324691, Length=219, Percent_Identity=26.4840182648402, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321709, Length=166, Percent_Identity=34.3373493975904, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320854, Length=231, Percent_Identity=29.8701298701299, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322651, Length=192, Percent_Identity=31.25, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320887, Length=204, Percent_Identity=27.9411764705882, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325183, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320602, Length=139, Percent_Identity=35.2517985611511, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=153, Percent_Identity=32.0261437908497, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17137560, Length=250, Percent_Identity=29.6, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI161076488, Length=250, Percent_Identity=29.6, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI161076486, Length=250, Percent_Identity=29.6, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI45552965, Length=241, Percent_Identity=28.6307053941909, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI281365776, Length=241, Percent_Identity=28.6307053941909, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24660075, Length=241, Percent_Identity=28.6307053941909, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24652279, Length=189, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI19921202, Length=280, Percent_Identity=27.1428571428571, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24649446, Length=145, Percent_Identity=33.7931034482759, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24640100, Length=174, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24639486, Length=156, Percent_Identity=35.2564102564103, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137738, Length=152, Percent_Identity=34.8684210526316, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360142, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21357333, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360146, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360138, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI18859657, Length=187, Percent_Identity=32.0855614973262, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360144, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360140, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281360136, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644411, Length=185, Percent_Identity=31.3513513513514, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17738151, Length=206, Percent_Identity=29.126213592233, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24663015, Length=178, Percent_Identity=32.5842696629214, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21355121, Length=142, Percent_Identity=35.9154929577465, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19920408, Length=258, Percent_Identity=27.1317829457364, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24651451, Length=263, Percent_Identity=26.9961977186312, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24658770, Length=179, Percent_Identity=31.2849162011173, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574878, Length=137, Percent_Identity=37.956204379562, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24644145, Length=185, Percent_Identity=31.8918918918919, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24665814, Length=137, Percent_Identity=37.956204379562, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI18860063, Length=183, Percent_Identity=32.7868852459016, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI281363136, Length=240, Percent_Identity=30, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI78707192, Length=240, Percent_Identity=30, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639391, Length=173, Percent_Identity=31.2138728323699, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281361487, Length=151, Percent_Identity=33.7748344370861, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24656825, Length=173, Percent_Identity=30.635838150289, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581396, Length=138, Percent_Identity=32.6086956521739, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24656820, Length=173, Percent_Identity=30.635838150289, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17864668, Length=132, Percent_Identity=34.0909090909091, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI28571849, Length=190, Percent_Identity=29.4736842105263, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28571847, Length=190, Percent_Identity=29.4736842105263, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959 [H]

Pfam domain/function: PF00004 AAA [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36878; Mature: 36747

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSEQLKALVSSHIEKDDDRFLSLTLQVAAHEARSGHGRLAQELRDIVEQAKKVSLKNL
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PISIAKSIKDTNGLLFTSHPKEKLNNLTAPVELKDQLKRLIREQRHMVKLKNHGLSPRRK
CHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ILLVGPPGTGKTYTASILAGELDYPLFQVRLDGILTKFMGESAAKLRQVFDAINEVRGVY
EEEECCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEE
FFDEFDALGSHRSSTNDVGEARRILNSFLQMIEQDDSNSVIVCATNHMEILDHALFRRFD
EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
DVIHYQLPDDSEIITLLKNKLMPFVAKSFGWNKLPEQARGLSSAEITRASDDAIKEMLIN
HHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHC
GLPRVTASILIKSIKERYKMSQHLNKK
CCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASSEQLKALVSSHIEKDDDRFLSLTLQVAAHEARSGHGRLAQELRDIVEQAKKVSLKNL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PISIAKSIKDTNGLLFTSHPKEKLNNLTAPVELKDQLKRLIREQRHMVKLKNHGLSPRRK
CHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ILLVGPPGTGKTYTASILAGELDYPLFQVRLDGILTKFMGESAAKLRQVFDAINEVRGVY
EEEECCCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEE
FFDEFDALGSHRSSTNDVGEARRILNSFLQMIEQDDSNSVIVCATNHMEILDHALFRRFD
EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
DVIHYQLPDDSEIITLLKNKLMPFVAKSFGWNKLPEQARGLSSAEITRASDDAIKEMLIN
HHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHC
GLPRVTASILIKSIKERYKMSQHLNKK
CCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]