Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877517
Identifier: 160877517
GI number: 160877517
Start: 5215981
End: 5217399
Strand: Reverse
Name: 160877517
Synonym: Sbal195_4416
Alternate gene names: NA
Gene position: 5217399-5215981 (Counterclockwise)
Preceding gene: 160877518
Following gene: 160877516
Centisome position: 97.57
GC content: 37.14
Gene sequence:
>1419_bases ATGTCTTTAAATAATGGAGCGAAGCCTCATATATTTCTTGGAAGAAATGGTACATCCTTACCATATACTTATCCTAAAAA GGTTATTATAAATAAAGATATTCCAGAAAAACACCGCCCAACTCATGGGGCCGCCATACAATCCCAAATAACTTTAGTTA AAAAATTTCAAGCACAGTTAGAACAAAAAGCTGCACAGTATGAGCTTGAATCAAGACTTGGAATTCAAGTAGCATTCGAA AGCTTTCCTGGCGTGGAGTTAGCAGTTGAAAGCCTAGCGGATGCTGTCCAAGGAATTGAATTACTGAATGTTCGATATTC AGAAAATCAAATTCTTGCCACTATATTTGTTCCACAAGGCAAACTTGTCTCTATTGAAAAAAAGCTCGAAGCTTACTTAA ATTTTAAAAAAGACAAAAACAAAAAACCAATTGATAACAGAAAGTTATTCGATGCTATAAAGTCACTGAAAATAGCCGCT ATTGAAGCCCTATGGACAGACGATCCTGATTTATTACCTGAAGACATTCACAAAGTGTTTTGGTGGGAAGTTTGGTTACC GGTCATGGATGATAGACAGGCTTTAATTCATGACTTTAAAATACTCTCAGCCGAATTAGAAATTCAGGTATCAGATCACG TTCTTGAATTTCCTGAACGCTCAGTTTTATTAGCAAAAGCAAATAGAAAACAATTCATTAATAGTTCCCTTTTGCTAAGT AAGATATCTGAATTACGCCTTGCAAAGGAAACGGCCTCGTTCTTTGATGAGTTATCACCTATAGAACAGCAAGATTGGAG TAATGAGCTCTTATCTCGAACAATGATTAAAGGCGAAAATCCACCATATTTATGTATTTTAGATACTGGCGTAAATATCT GCCACCCATTATTACAACCATTTATTAATGAAGTAGATCAATTCTCGGTTAATCCTGATTGGAGTCCAAGTGATGATAAT GGACACGGTACAGGAATGGCAGGTCTTGCTTTATGGTCTGATTTAACTGATGCACTTTCATCTACAGAGACTATTAATAT TAGCCATAGGTTAGAGTCAGTAAAACTACTTCGCCATTCAGGTGATAATGAAGGCAAACACTATGGAATAATTATGAGTG ATGCTATTTCTTTACCAGAAATATCGGATCATAAGCGTACTCGTGTTTTTGCAATGGCATTATCATCCTCCGACAGTAGA GATAGAGGGAGACCATCTGCTTGGTCTAGCACAGTGGATGAGTTAGCTACTGATTCGCTAGGAGATAATCTTAATCCGAG ATTAATAACTATTTCAGCAGGGAATACGGGGGATGATCTCGTTGGGTTACTGGAATATCCTGACTACAATCAACTACAAG ATGTACATGATCCAGGACAAGCATGGAATTGTAGTGGCACACTAATTTTGGCCACCTAA
Upstream 100 bases:
>100_bases AATTAATGGATTACCTAGAGTCACTGCTTCGATCCTAATTAAATCAATCAAAGAAAGATACAAAATGAGTCAGCATTTAA ATAAAAAATAAGGATGTTAA
Downstream 100 bases:
>100_bases ATAGAGGTGATATTATTACCTCGTAGATGACTTTAGGTGAACACATGAGATCGACAACCAGAAAAACATTTAGTGCTGAA TTCAAACTTGAAGCAGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSLNNGAKPHIFLGRNGTSLPYTYPKKVIINKDIPEKHRPTHGAAIQSQITLVKKFQAQLEQKAAQYELESRLGIQVAFE SFPGVELAVESLADAVQGIELLNVRYSENQILATIFVPQGKLVSIEKKLEAYLNFKKDKNKKPIDNRKLFDAIKSLKIAA IEALWTDDPDLLPEDIHKVFWWEVWLPVMDDRQALIHDFKILSAELEIQVSDHVLEFPERSVLLAKANRKQFINSSLLLS KISELRLAKETASFFDELSPIEQQDWSNELLSRTMIKGENPPYLCILDTGVNICHPLLQPFINEVDQFSVNPDWSPSDDN GHGTGMAGLALWSDLTDALSSTETINISHRLESVKLLRHSGDNEGKHYGIIMSDAISLPEISDHKRTRVFAMALSSSDSR DRGRPSAWSSTVDELATDSLGDNLNPRLITISAGNTGDDLVGLLEYPDYNQLQDVHDPGQAWNCSGTLILAT
Sequences:
>Translated_472_residues MSLNNGAKPHIFLGRNGTSLPYTYPKKVIINKDIPEKHRPTHGAAIQSQITLVKKFQAQLEQKAAQYELESRLGIQVAFE SFPGVELAVESLADAVQGIELLNVRYSENQILATIFVPQGKLVSIEKKLEAYLNFKKDKNKKPIDNRKLFDAIKSLKIAA IEALWTDDPDLLPEDIHKVFWWEVWLPVMDDRQALIHDFKILSAELEIQVSDHVLEFPERSVLLAKANRKQFINSSLLLS KISELRLAKETASFFDELSPIEQQDWSNELLSRTMIKGENPPYLCILDTGVNICHPLLQPFINEVDQFSVNPDWSPSDDN GHGTGMAGLALWSDLTDALSSTETINISHRLESVKLLRHSGDNEGKHYGIIMSDAISLPEISDHKRTRVFAMALSSSDSR DRGRPSAWSSTVDELATDSLGDNLNPRLITISAGNTGDDLVGLLEYPDYNQLQDVHDPGQAWNCSGTLILAT >Mature_471_residues SLNNGAKPHIFLGRNGTSLPYTYPKKVIINKDIPEKHRPTHGAAIQSQITLVKKFQAQLEQKAAQYELESRLGIQVAFES FPGVELAVESLADAVQGIELLNVRYSENQILATIFVPQGKLVSIEKKLEAYLNFKKDKNKKPIDNRKLFDAIKSLKIAAI EALWTDDPDLLPEDIHKVFWWEVWLPVMDDRQALIHDFKILSAELEIQVSDHVLEFPERSVLLAKANRKQFINSSLLLSK ISELRLAKETASFFDELSPIEQQDWSNELLSRTMIKGENPPYLCILDTGVNICHPLLQPFINEVDQFSVNPDWSPSDDNG HGTGMAGLALWSDLTDALSSTETINISHRLESVKLLRHSGDNEGKHYGIIMSDAISLPEISDHKRTRVFAMALSSSDSRD RGRPSAWSSTVDELATDSLGDNLNPRLITISAGNTGDDLVGLLEYPDYNQLQDVHDPGQAWNCSGTLILAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52786; Mature: 52655
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNNGAKPHIFLGRNGTSLPYTYPKKVIINKDIPEKHRPTHGAAIQSQITLVKKFQAQL CCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHH EQKAAQYELESRLGIQVAFESFPGVELAVESLADAVQGIELLNVRYSENQILATIFVPQG HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEECCC KLVSIEKKLEAYLNFKKDKNKKPIDNRKLFDAIKSLKIAAIEALWTDDPDLLPEDIHKVF CEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEHEEECCCCCCCHHHHHHHH WWEVWLPVMDDRQALIHDFKILSAELEIQVSDHVLEFPERSVLLAKANRKQFINSSLLLS HHHEECCCCCCHHHHHHHHHHEEEEEEEEECCHHHHCCCCEEEEEECCHHHHHHHHHHHH KISELRLAKETASFFDELSPIEQQDWSNELLSRTMIKGENPPYLCILDTGVNICHPLLQP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH FINEVDQFSVNPDWSPSDDNGHGTGMAGLALWSDLTDALSSTETINISHRLESVKLLRHS HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHC GDNEGKHYGIIMSDAISLPEISDHKRTRVFAMALSSSDSRDRGRPSAWSSTVDELATDSL CCCCCCEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GDNLNPRLITISAGNTGDDLVGLLEYPDYNQLQDVHDPGQAWNCSGTLILAT CCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure SLNNGAKPHIFLGRNGTSLPYTYPKKVIINKDIPEKHRPTHGAAIQSQITLVKKFQAQL CCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHH EQKAAQYELESRLGIQVAFESFPGVELAVESLADAVQGIELLNVRYSENQILATIFVPQG HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEECCC KLVSIEKKLEAYLNFKKDKNKKPIDNRKLFDAIKSLKIAAIEALWTDDPDLLPEDIHKVF CEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEHEEECCCCCCCHHHHHHHH WWEVWLPVMDDRQALIHDFKILSAELEIQVSDHVLEFPERSVLLAKANRKQFINSSLLLS HHHEECCCCCCHHHHHHHHHHEEEEEEEEECCHHHHCCCCEEEEEECCHHHHHHHHHHHH KISELRLAKETASFFDELSPIEQQDWSNELLSRTMIKGENPPYLCILDTGVNICHPLLQP HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH FINEVDQFSVNPDWSPSDDNGHGTGMAGLALWSDLTDALSSTETINISHRLESVKLLRHS HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHC GDNEGKHYGIIMSDAISLPEISDHKRTRVFAMALSSSDSRDRGRPSAWSSTVDELATDSL CCCCCCEEEEEEECCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC GDNLNPRLITISAGNTGDDLVGLLEYPDYNQLQDVHDPGQAWNCSGTLILAT CCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA