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The map label for this gene is 160877513

Identifier: 160877513

GI number: 160877513

Start: 5211991

End: 5213406

Strand: Direct

Name: 160877513

Synonym: Sbal195_4412

Alternate gene names: NA

Gene position: 5211991-5213406 (Clockwise)

Preceding gene: 160877512

Following gene: 160877519

Centisome position: 97.47

GC content: 41.31

Gene sequence:

>1416_bases
ATGCAACTTAGACAATGGCAATCAGAGTGTGTCAAACGCGCTCTAAGACACTTTCACGGTGCACATAGACACTTTCTTTG
TTTAGCAACGCCTGGGGCTGGAAAATCGATTATGGCAGCCGAAGTTGCTGCGAAATTATTTGAAGATGATTTAATCGACT
TTGTACTGTGCTTCTCCCCGTCAGTGAATATATCTCAAGGGATGAAACAAACCTTTTCAAGTCGTCTAAGCTGCCGGTTT
GATGGCGTGATAGGTTCAGTTGGTTGCTCTTATACTTACCAAGGGATGTTGGCCTTTAAAGAAGACTTTTGGCAACTGCT
AAAAAGAAATCGAGTACTCGTGATCTTTGATGAAATTCATCATTGCGCAGGGAGCTCTCTAGAAGATGCGAACGCATGGG
GGGAAGAGATTCTACTCAACATACAAGATCAAGCGCAGTACACACTAGCGTTAACTGGTACGCCTTGGCGCTCAGATCAA
GCACCGATTGTTTTATCTCGATATACCGACCCTGATAATCAAATTCAATGTGACTATGTGTATGGCCTGAAGGAAGCTGT
TGCCGACGGTGTATGTCGTAGCCCCCGCATTGTACTTATTGATAATGACAAAATTTTAGTTACTGACGAAGAAAACGAAA
CAAAGACATACAGTTGTTTAGATGACTTATTTAAATGCTCATCGGTTTCGTACCAGTCGATCATCAAAAATCATGAAGCA
ATTCGACATACTTTAGCGCTAGCAACGGACAAACTTGGAATGATAAAACAGTCCAATCCTAATGCTGCCGGACTCATCGT
CGCTTCATCAATATCGCACGCCGCATATATCTTTAATATGCTAAAAACAGATTTTAGTGAAACAACTCAGATAGTTACCT
ACAAAGAAGATGACCCCTCACTTAAGATAAATGAATTTAGAAATAGTACGACTAATTGGATCGTCAGTGTAGGCATGATA
AGTGAAGGGACTGACATCCCTCGTCTACAGGTCTGCTGCCACCTTAGCCGAGTAAAAACCGAGCTCTACTTTAGGCAGGT
TTTAGGTCGTATTTTACGTACGAATGATTCGACGAACCAACAAGCTTGGCTATACACCTTTGCAGAGCCAAAACTTGTCG
AATTTGCCAACCGTATAGCAGAAGAAATACCTGATATACCTGTGTTATTTAGAGAGCCAATCGAGATAAATCTCAAACGC
GAGCAACCCGAAACCCATGATATGACAGTGAAAACAATGCCACCTACTAACAGCAATATTCTGAATATTGGCAGGCAATA
CCTCGCTAAACAGACACAATCGTATTCTGTAGAGCTTTTATCAAGGGAATTTTTAGGTACTCCAGCATCGTTATCATTTG
AGCTTTTAGGTGGTTTTAGAGAAAAAGTTGTCTCAACTTTTGACTCACCGTTTTAA

Upstream 100 bases:

>100_bases
CTCGAATCCCAGTACTTGCAGGCTCGCGAAACAAGCTCAAAACTACTTGGCCAAATCAAAGCGATTAAATCTGCTATCAC
CCATCAGCAAAAGTAACCGA

Downstream 100 bases:

>100_bases
ATCCAAATGTCTGAATTATGGTGCCCACTTTTCTCGACACTTTGATTTTTAGTTTCATGGTAGTTCCATAAAACTAAAAA
TGATTGGATACACTAAAGCC

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSPSVNISQGMKQTFSSRLSCRF
DGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIHHCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQ
APIVLSRYTDPDNQIQCDYVYGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQQAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKR
EQPETHDMTVKTMPPTNSNILNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF

Sequences:

>Translated_471_residues
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSPSVNISQGMKQTFSSRLSCRF
DGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIHHCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQ
APIVLSRYTDPDNQIQCDYVYGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQQAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKR
EQPETHDMTVKTMPPTNSNILNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF
>Mature_471_residues
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSPSVNISQGMKQTFSSRLSCRF
DGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIHHCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQ
APIVLSRYTDPDNQIQCDYVYGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQQAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKR
EQPETHDMTVKTMPPTNSNILNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 53260; Mature: 53260

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSP
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SVNISQGMKQTFSSRLSCRFDGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIH
CCCHHHHHHHHHHHHCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHH
HCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQAPIVLSRYTDPDNQIQCDYV
HHCCCCCCHHHCCCHHEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHH
YGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPS
HHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
LKINEFRNSTTNWIVSVGMISEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQ
EEHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKREQPETHDMTVKTMPPTNSNI
EEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCCCCHH
LNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSP
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SVNISQGMKQTFSSRLSCRFDGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIH
CCCHHHHHHHHHHHHCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHH
HCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQAPIVLSRYTDPDNQIQCDYV
HHCCCCCCHHHCCCHHEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEHH
YGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
HHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPS
HHHHHHHHHHCCCCEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
LKINEFRNSTTNWIVSVGMISEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQ
EEHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKREQPETHDMTVKTMPPTNSNI
EEEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCCCCHH
LNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF
HHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]