| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877512
Identifier: 160877512
GI number: 160877512
Start: 5211444
End: 5211986
Strand: Direct
Name: 160877512
Synonym: Sbal195_4411
Alternate gene names: NA
Gene position: 5211444-5211986 (Clockwise)
Preceding gene: 160877510
Following gene: 160877513
Centisome position: 97.46
GC content: 40.33
Gene sequence:
>543_bases ATGCCTAAATCTTCAATCAAAATATGCACGACATTGCATAACATTCTCCAGGACGAGAGCTTCAATAATTTTCAAGTAAT GGGCCTGAGAGACGCCTATCTCGCAGCTTCAACTAGCGCTCCTAGTCTTAGTGATACCTACAATTTCATTTATCGTCAGG TCCACAGGCTCGTGAAGAAGGGGATCTTAGATAAAAATGTGGATGAACAGACGAAGGAAACAACTTACCAAAAGACTGCA AAATTCTTTCAAACAAATTTTATTCTGCAAAAATCAGAGGCATCTACATCCACTACAGAATCGCCAACAAGAAACACGCA AAAAAGTAATGCAATTAATCAATTAGAAGAGCGGCTCAAGCAATCCGAAATTGATTTATTTACGAGCATCGGCGAGTCCG AAGAGTATATGCGCTTATATCAATCCTTTCCCGACATGAAAGTACACCTCGAATCCCAGTACTTGCAGGCTCGCGAAACA AGCTCAAAACTACTTGGCCAAATCAAAGCGATTAAATCTGCTATCACCCATCAGCAAAAGTAA
Upstream 100 bases:
>100_bases AAGTTGCGGCTTACAAAGCCACGGATTATAATCCGCATTACATTTACAATGCTCTAATAACGCTTAGAGCGATCACTAAA CAGCCTGCTGCGAGAACGTC
Downstream 100 bases:
>100_bases CCGAATGCAACTTAGACAATGGCAATCAGAGTGTGTCAAACGCGCTCTAAGACACTTTCACGGTGCACATAGACACTTTC TTTGTTTAGCAACGCCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MPKSSIKICTTLHNILQDESFNNFQVMGLRDAYLAASTSAPSLSDTYNFIYRQVHRLVKKGILDKNVDEQTKETTYQKTA KFFQTNFILQKSEASTSTTESPTRNTQKSNAINQLEERLKQSEIDLFTSIGESEEYMRLYQSFPDMKVHLESQYLQARET SSKLLGQIKAIKSAITHQQK
Sequences:
>Translated_180_residues MPKSSIKICTTLHNILQDESFNNFQVMGLRDAYLAASTSAPSLSDTYNFIYRQVHRLVKKGILDKNVDEQTKETTYQKTA KFFQTNFILQKSEASTSTTESPTRNTQKSNAINQLEERLKQSEIDLFTSIGESEEYMRLYQSFPDMKVHLESQYLQARET SSKLLGQIKAIKSAITHQQK >Mature_179_residues PKSSIKICTTLHNILQDESFNNFQVMGLRDAYLAASTSAPSLSDTYNFIYRQVHRLVKKGILDKNVDEQTKETTYQKTAK FFQTNFILQKSEASTSTTESPTRNTQKSNAINQLEERLKQSEIDLFTSIGESEEYMRLYQSFPDMKVHLESQYLQARETS SKLLGQIKAIKSAITHQQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20672; Mature: 20540
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSSIKICTTLHNILQDESFNNFQVMGLRDAYLAASTSAPSLSDTYNFIYRQVHRLVKK CCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH GILDKNVDEQTKETTYQKTAKFFQTNFILQKSEASTSTTESPTRNTQKSNAINQLEERLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH QSEIDLFTSIGESEEYMRLYQSFPDMKVHLESQYLQARETSSKLLGQIKAIKSAITHQQK HHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKSSIKICTTLHNILQDESFNNFQVMGLRDAYLAASTSAPSLSDTYNFIYRQVHRLVKK CCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH GILDKNVDEQTKETTYQKTAKFFQTNFILQKSEASTSTTESPTRNTQKSNAINQLEERLK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH QSEIDLFTSIGESEEYMRLYQSFPDMKVHLESQYLQARETSSKLLGQIKAIKSAITHQQK HHHHHHHHHCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA