Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877493
Identifier: 160877493
GI number: 160877493
Start: 5187515
End: 5188045
Strand: Reverse
Name: 160877493
Synonym: Sbal195_4391
Alternate gene names: NA
Gene position: 5188045-5187515 (Counterclockwise)
Preceding gene: 160877494
Following gene: 160877491
Centisome position: 97.02
GC content: 45.39
Gene sequence:
>531_bases ATGAATCTGTATTTTCGTTTGTTTTGGTTGTTATTTTGGCGCACGCGTCACTGCCGTAAGATCGATTTTTTAGGGACAAG CCGTATCACGTATCGTGCTTTACCGAGCGATTGCGATATCAATTTCCATCTGACTAATTCCCGCTATCCTGCGTTTATGG ATCTGGCACGGACTTATATGTTGGCCGAGATGGGTCTGCTGAAACGTTTCTTAAAGTTGAAGTGGATGCCGATAGTTAAC GCCGCCGAGTTTACCTATATTCGCGATATCAAGCCGCTAAAAACCTTTGAAATTGAAACCAAAGTCGTCGGTTGGGATGA GAAATATTTCTATATTGAACAACGCTTTGTGAGCGAACGTGGCCTGCATTGTATCGTGCATGTGCGCGGTGTGTTCGTGT GCAAAGGTAAGCAAGTGCCGCTCGATGTGTTAGTAAAAGAGGCGGGTTATACCGATGCTGCACCTGAGTTGCCGCCAGAA GTCGTGAAGTGGAAAGCGTTTTTGCAGTTGAAGAAAGAACGCAATATGTGA
Upstream 100 bases:
>100_bases AAAAAGGCGTCATCTGACGCCTTTTTTGTGACATAGATCCCGCTTGCCCTGTGGTATGACCTCTGTTAGCCTGTGGCTCT TATTCCAAGGGCGACTCGTT
Downstream 100 bases:
>100_bases TCTTGTTGAGGCATGACTTACCCCGCTAAGGTATGCCTCTTATTCCCGCCGTTTCCTCCATTTCAGCCAGCAACACCTCT TCTTGTACTAACATCCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Domain-Containing Protein; Thioesterase Family Protein; Acyl-CoA Thioesterase
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHLTNSRYPAFMDLARTYMLAEMGLLKRFLKLKWMPIVN AAEFTYIRDIKPLKTFEIETKVVGWDEKYFYIEQRFVSERGLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPE VVKWKAFLQLKKERNM
Sequences:
>Translated_176_residues MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHLTNSRYPAFMDLARTYMLAEMGLLKRFLKLKWMPIVN AAEFTYIRDIKPLKTFEIETKVVGWDEKYFYIEQRFVSERGLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPE VVKWKAFLQLKKERNM >Mature_176_residues MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHLTNSRYPAFMDLARTYMLAEMGLLKRFLKLKWMPIVN AAEFTYIRDIKPLKTFEIETKVVGWDEKYFYIEQRFVSERGLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPE VVKWKAFLQLKKERNM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7706200, Length=152, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319572, Length=146, Percent_Identity=28.7671232876712, Blast_Score=62, Evalue=5e-11, Organism=Drosophila melanogaster, GI18858163, Length=178, Percent_Identity=28.0898876404494, Blast_Score=63, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21037; Mature: 21037
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHLTNSRYPAFMDLARTYM CCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHH LAEMGLLKRFLKLKWMPIVNAAEFTYIRDIKPLKTFEIETKVVGWDEKYFYIEQRFVSER HHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEHHHHHHCC GLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPEVVKWKAFLQLKKERNM CCEEEEEEEEEEEECCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLYFRLFWLLFWRTRHCRKIDFLGTSRITYRALPSDCDINFHLTNSRYPAFMDLARTYM CCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHH LAEMGLLKRFLKLKWMPIVNAAEFTYIRDIKPLKTFEIETKVVGWDEKYFYIEQRFVSER HHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCEEEEEHHHHHHCC GLHCIVHVRGVFVCKGKQVPLDVLVKEAGYTDAAPELPPEVVKWKAFLQLKKERNM CCEEEEEEEEEEEECCCCCCHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA