| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is abgT [H]
Identifier: 160877483
GI number: 160877483
Start: 5177422
End: 5179044
Strand: Direct
Name: abgT [H]
Synonym: Sbal195_4381
Alternate gene names: 160877483
Gene position: 5177422-5179044 (Clockwise)
Preceding gene: 160877479
Following gene: 160877488
Centisome position: 96.82
GC content: 51.82
Gene sequence:
>1623_bases ATGAGTTTCAATTCCGGCGATATCCCCCCAAAAAAGGCCTCGGAGCCAGATCCACAACATGGCGATATCAGCGCCAGTGG TTGGTTTGTGCGTTTTCTCAATATTGTTGAACGCTTAGGTAATCTTCTCCCCCACCCAATCACCCTATTCGCGCTGTTCT GCGTCGCTGTGGTCGTCATTTCAGGTATCGCGGGTTACTTTGGCCTGACCGTTGTTGACCCAAGACCTATTGGTTCCCAC GGCCGCAGTGCCGATGGTTTAATCCATGTGGTAAGCCTAATGAACGCCGAAGGCTTGCGGATGATAGTCTCGCATCTGGT GACTAACTTTACTGGCTTTACGCCGCTTGGCACTGTGCTCGTCGCACTACTCGGCGTCGGGATTGCAGAACGTTCCGGCT TATTATCCGCCGCTATGCGCGCCTTAGTCATGGGCGCCTCAAAGCGATTGGTTACTGTGACCATAGTCTTTGCCGGCATC ATGTCCAACACGGCCGCCGAGCTTGGCTATGTGGTGTTAATCCCTATGGCGGCGATGATTTTCCACTCCCTTGGTCGCCA TCCTCTGGCCGGTTTAGCCGCCGCCTTTGCGGGGGTTTCAGGAGGCTATAGCGCAAACTTGTTACTGGGTACTGTCGATC CCTTATTATCAGGCATTACCGAAGCTGCGGCGCGCATGATAGATCCTGAGTACAACGTCGGCCCAGAAGTGAACTGGTAC TTCATGTTTGTCTCAACCTTTGTGATCACTTTCCTCGGCGCCTTTGTCACCGAGAAAATCGTCGAGCCTAAGTTAGGCAA ATACCAAGGTGAAGATGCGGATGAAACCGTACTGCAATCAATGGAGAGCGTTAGTGCGATTGAAAAGCGTGGCTTAAAAT GGGCTGGGTTATCTATGTTAGTGCTCGCCGTTATCCTAGCGCTTTCAGTCGTCCCCGAAGGTGCGCCGCTGCGTCATCCA GAAACTGGCCTTATCTCAGGTTCGCCCTTCCTCAAGGGTATAGTCGCCTTCATCTTTATTTGTTTTGCCATACCGGGCTT TATTTACGGCAAAGTCGTGGGCAGCATCAAAAATGATAAAGATGTCATCAATGCCATGTCCCACAGCATGAGCACTATGG GTATGTATATCGTCCTCGTCTTCTTCGCCGCGCAGTTTGTCGCCTTCTTCAACTGGAGTAATTTAGGTGCGGTACTCGCA GTGTTAGGGGCCGATGGGCTGCAATCCATAGGCTTGACTGGCCCTATTGTGTTCCTGTTCTTTATTATGCTTTGCGGCTT TATCAACTTGATGCTCGGCAGCGCCTCGGCGCAATGGGCCATTACCGCTCCTATTTTCGTGCCTATGCTGATGCTGGTCG GTTATGCGCCCGAAACAATTCAAGCGGCTTACCGTATTGGGGACTCAGTGACGAACTTAGTCACGCCTATGATGAGCTAC TTTGGTTTGATATTAGCGGTCGCCTGTCGTTACCAGAAAAACCTCGGTATAGGCACGCTGATCGCCACTATGCTGCCGTA CACCCTGGTGTTTTTCGTGGGTTGGACAGCGTTCTTCTTCCTGTGGGTATTTGGTTTTGGTCTGCCAGTCGGGCCAGGCG CAGCGACTTACTACACGCCTTAA
Upstream 100 bases:
>100_bases CCTCAGCCACCTTATTCGCAGTCGGCCGTCGGCTATGCCTCGCGTCTGTTCTAGGGTCAAAGATAGTGCGCTGCGCAAAG GTCGACATAAAGGAAGAACG
Downstream 100 bases:
>100_bases CCTCAATAAAAAGGGCGTCGATGATGAAGTCGACGCCCTTGCTTTATCGGGTTGATCCACTAAAACCCTTAGATTTAGTC GTATAACCATTCCATCAACA
Product: putative transporter AbgT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MSFNSGDIPPKKASEPDPQHGDISASGWFVRFLNIVERLGNLLPHPITLFALFCVAVVVISGIAGYFGLTVVDPRPIGSH GRSADGLIHVVSLMNAEGLRMIVSHLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRALVMGASKRLVTVTIVFAGI MSNTAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAARMIDPEYNVGPEVNWY FMFVSTFVITFLGAFVTEKIVEPKLGKYQGEDADETVLQSMESVSAIEKRGLKWAGLSMLVLAVILALSVVPEGAPLRHP ETGLISGSPFLKGIVAFIFICFAIPGFIYGKVVGSIKNDKDVINAMSHSMSTMGMYIVLVFFAAQFVAFFNWSNLGAVLA VLGADGLQSIGLTGPIVFLFFIMLCGFINLMLGSASAQWAITAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLVTPMMSY FGLILAVACRYQKNLGIGTLIATMLPYTLVFFVGWTAFFFLWVFGFGLPVGPGAATYYTP
Sequences:
>Translated_540_residues MSFNSGDIPPKKASEPDPQHGDISASGWFVRFLNIVERLGNLLPHPITLFALFCVAVVVISGIAGYFGLTVVDPRPIGSH GRSADGLIHVVSLMNAEGLRMIVSHLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRALVMGASKRLVTVTIVFAGI MSNTAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAARMIDPEYNVGPEVNWY FMFVSTFVITFLGAFVTEKIVEPKLGKYQGEDADETVLQSMESVSAIEKRGLKWAGLSMLVLAVILALSVVPEGAPLRHP ETGLISGSPFLKGIVAFIFICFAIPGFIYGKVVGSIKNDKDVINAMSHSMSTMGMYIVLVFFAAQFVAFFNWSNLGAVLA VLGADGLQSIGLTGPIVFLFFIMLCGFINLMLGSASAQWAITAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLVTPMMSY FGLILAVACRYQKNLGIGTLIATMLPYTLVFFVGWTAFFFLWVFGFGLPVGPGAATYYTP >Mature_539_residues SFNSGDIPPKKASEPDPQHGDISASGWFVRFLNIVERLGNLLPHPITLFALFCVAVVVISGIAGYFGLTVVDPRPIGSHG RSADGLIHVVSLMNAEGLRMIVSHLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRALVMGASKRLVTVTIVFAGIM SNTAAELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAARMIDPEYNVGPEVNWYF MFVSTFVITFLGAFVTEKIVEPKLGKYQGEDADETVLQSMESVSAIEKRGLKWAGLSMLVLAVILALSVVPEGAPLRHPE TGLISGSPFLKGIVAFIFICFAIPGFIYGKVVGSIKNDKDVINAMSHSMSTMGMYIVLVFFAAQFVAFFNWSNLGAVLAV LGADGLQSIGLTGPIVFLFFIMLCGFINLMLGSASAQWAITAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLVTPMMSYF GLILAVACRYQKNLGIGTLIATMLPYTLVFFVGWTAFFFLWVFGFGLPVGPGAATYYTP
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=499, Percent_Identity=39.0781563126253, Blast_Score=341, Evalue=7e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 57479; Mature: 57348
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNSGDIPPKKASEPDPQHGDISASGWFVRFLNIVERLGNLLPHPITLFALFCVAVVVI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SGIAGYFGLTVVDPRPIGSHGRSADGLIHVVSLMNAEGLRMIVSHLVTNFTGFTPLGTVL HHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH VALLGVGIAERSGLLSAAMRALVMGASKRLVTVTIVFAGIMSNTAAELGYVVLIPMAAMI HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAARMIDPEYNVGPEVNWY HHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FMFVSTFVITFLGAFVTEKIVEPKLGKYQGEDADETVLQSMESVSAIEKRGLKWAGLSML HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH VLAVILALSVVPEGAPLRHPETGLISGSPFLKGIVAFIFICFAIPGFIYGKVVGSIKNDK HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DVINAMSHSMSTMGMYIVLVFFAAQFVAFFNWSNLGAVLAVLGADGLQSIGLTGPIVFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH FIMLCGFINLMLGSASAQWAITAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLVTPMMSY HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FGLILAVACRYQKNLGIGTLIATMLPYTLVFFVGWTAFFFLWVFGFGLPVGPGAATYYTP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SFNSGDIPPKKASEPDPQHGDISASGWFVRFLNIVERLGNLLPHPITLFALFCVAVVVI CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SGIAGYFGLTVVDPRPIGSHGRSADGLIHVVSLMNAEGLRMIVSHLVTNFTGFTPLGTVL HHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH VALLGVGIAERSGLLSAAMRALVMGASKRLVTVTIVFAGIMSNTAAELGYVVLIPMAAMI HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FHSLGRHPLAGLAAAFAGVSGGYSANLLLGTVDPLLSGITEAAARMIDPEYNVGPEVNWY HHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FMFVSTFVITFLGAFVTEKIVEPKLGKYQGEDADETVLQSMESVSAIEKRGLKWAGLSML HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH VLAVILALSVVPEGAPLRHPETGLISGSPFLKGIVAFIFICFAIPGFIYGKVVGSIKNDK HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DVINAMSHSMSTMGMYIVLVFFAAQFVAFFNWSNLGAVLAVLGADGLQSIGLTGPIVFLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH FIMLCGFINLMLGSASAQWAITAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLVTPMMSY HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FGLILAVACRYQKNLGIGTLIATMLPYTLVFFVGWTAFFFLWVFGFGLPVGPGAATYYTP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]