Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 160877479

GI number: 160877479

Start: 5173527

End: 5174372

Strand: Direct

Name: yhiR [H]

Synonym: Sbal195_4377

Alternate gene names: 160877479

Gene position: 5173527-5174372 (Clockwise)

Preceding gene: 160877478

Following gene: 160877483

Centisome position: 96.75

GC content: 48.23

Gene sequence:

>846_bases
ATGTTAAGTTACCGCCATGGTTATCACGCTGGCAATTATGCCGATGTGTTGAAACACGCCATCTTGCTTCAAACCTTGCA
GCTGATGCACAAGAAAGACAAACCACTCGTGTATATCGATACCCATGCGGGTGCGGGTGGTTATGCTTTAAGCGATGAAT
TTGCACAAAAAACCGGTGAATACCTCGAAGGTGTAGCTAAGCTTTGGGATAAAACTGATCTGCCGCAATCGCTGCAGGAC
TATGTCGCCGCCGTGCGTCATTTTAATGAAGAAAATCCTGACGAACTCAACTTCTACCCAGGTTCGCCTGCCATTATAGA
CATGGAATTGGGGCCTAAAGATCGCATGGTGCTGCACGAGCTGCACAGCACTGATTATGTGTTGCTGGACGATTATTTCT
GCGAAGACAGACAAGTAAAAGTGATCAAAGGCGATGGCTTAAAAGGCCTTATCGCCGCAGTGCCACCCTTAGAGCGCCGC
GCTCTGGTGCTCGTCGATCCTAGCTACGAGATGAAAACCGACTATCAAGATGTAGCCGAAACCCTGATCAAAGCGCATAA
ACGTTTTGCTACGGGCGTGTTTATGCTCTGGTATCCAGTGGTGAATCGCGCTCAGACCGAAGGCATGTTATCGCGCCTCG
CCAGTAGTGGCATTAAACGTCAGCTAAGAATTGAGCAGGCGATTAAACCCGATTCGGATGAGTTTGGCATGACAGCGGCA
GGGTTATGGATCATTAATCCGCCTTGGCAGTTAGATGAAATCGCAACCGAATTAATGGATTACTTAGGTAAGACGCTCGG
ACAAGCGGACGGTAATATCACAGTAAAATGGGAAGTCGGCGAATAA

Upstream 100 bases:

>100_bases
CCAACTGAGGCATTAAATTTACGCCTACAAGCATCGCAGGTATAATTGGCGTCAGGCATTTGCCTCTCTTTGCTTTGTTT
GCAAATTACTAGGATCCCCC

Downstream 100 bases:

>100_bases
CCTTCGACTCAAATGGCGGCGATGATCTCAGGTTTTCGCCGCTTGATTTAAGTTCACAAAGCCTACAGCTAAACGCCCTT
CTGCTCGCGATAACGCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSYRHGYHAGNYADVLKHAILLQTLQLMHKKDKPLVYIDTHAGAGGYALSDEFAQKTGEYLEGVAKLWDKTDLPQSLQD
YVAAVRHFNEENPDELNFYPGSPAIIDMELGPKDRMVLHELHSTDYVLLDDYFCEDRQVKVIKGDGLKGLIAAVPPLERR
ALVLVDPSYEMKTDYQDVAETLIKAHKRFATGVFMLWYPVVNRAQTEGMLSRLASSGIKRQLRIEQAIKPDSDEFGMTAA
GLWIINPPWQLDEIATELMDYLGKTLGQADGNITVKWEVGE

Sequences:

>Translated_281_residues
MLSYRHGYHAGNYADVLKHAILLQTLQLMHKKDKPLVYIDTHAGAGGYALSDEFAQKTGEYLEGVAKLWDKTDLPQSLQD
YVAAVRHFNEENPDELNFYPGSPAIIDMELGPKDRMVLHELHSTDYVLLDDYFCEDRQVKVIKGDGLKGLIAAVPPLERR
ALVLVDPSYEMKTDYQDVAETLIKAHKRFATGVFMLWYPVVNRAQTEGMLSRLASSGIKRQLRIEQAIKPDSDEFGMTAA
GLWIINPPWQLDEIATELMDYLGKTLGQADGNITVKWEVGE
>Mature_281_residues
MLSYRHGYHAGNYADVLKHAILLQTLQLMHKKDKPLVYIDTHAGAGGYALSDEFAQKTGEYLEGVAKLWDKTDLPQSLQD
YVAAVRHFNEENPDELNFYPGSPAIIDMELGPKDRMVLHELHSTDYVLLDDYFCEDRQVKVIKGDGLKGLIAAVPPLERR
ALVLVDPSYEMKTDYQDVAETLIKAHKRFATGVFMLWYPVVNRAQTEGMLSRLASSGIKRQLRIEQAIKPDSDEFGMTAA
GLWIINPPWQLDEIATELMDYLGKTLGQADGNITVKWEVGE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=282, Percent_Identity=48.5815602836879, Blast_Score=287, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31699; Mature: 31699

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00664 VINCULIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHGYHAGNYADVLKHAILLQTLQLMHKKDKPLVYIDTHAGAGGYALSDEFAQKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGVAKLWDKTDLPQSLQDYVAAVRHFNEENPDELNFYPGSPAIIDMELGPKDRMVLHE
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHH
LHSTDYVLLDDYFCEDRQVKVIKGDGLKGLIAAVPPLERRALVLVDPSYEMKTDYQDVAE
HCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
TLIKAHKRFATGVFMLWYPVVNRAQTEGMLSRLASSGIKRQLRIEQAIKPDSDEFGMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
GLWIINPPWQLDEIATELMDYLGKTLGQADGNITVKWEVGE
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHGYHAGNYADVLKHAILLQTLQLMHKKDKPLVYIDTHAGAGGYALSDEFAQKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGVAKLWDKTDLPQSLQDYVAAVRHFNEENPDELNFYPGSPAIIDMELGPKDRMVLHE
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHH
LHSTDYVLLDDYFCEDRQVKVIKGDGLKGLIAAVPPLERRALVLVDPSYEMKTDYQDVAE
HCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHH
TLIKAHKRFATGVFMLWYPVVNRAQTEGMLSRLASSGIKRQLRIEQAIKPDSDEFGMTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
GLWIINPPWQLDEIATELMDYLGKTLGQADGNITVKWEVGE
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]