| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhiQ [C]
Identifier: 160877477
GI number: 160877477
Start: 5170157
End: 5170903
Strand: Reverse
Name: yhiQ [C]
Synonym: Sbal195_4375
Alternate gene names: 160877477
Gene position: 5170903-5170157 (Counterclockwise)
Preceding gene: 160877480
Following gene: 160877467
Centisome position: 96.7
GC content: 50.74
Gene sequence:
>747_bases GTGACCCCGATTTTTTTCAATCAGCAATACCCAACACTTGTGGATATTTGTGCACGTTGGCAACTCGTCTACGATGCGAA TGCGACCTTCGAATTGCGTTTTGAATCAGATACTTTATCACTGCATAAACGCGATGAGCCTAAGCTCGATGGCATAGTGG TGGACTTTGTGACTGGTGCCGTCGCCCATAGACGTAAGTTTGGTGGTGGTCGCGGCCAATCCATCGCTAAAGCCGTGGGA TTAAAGCAAGGGGTAATGCCGAGTGTGGTTGATGGCACTGCGGGTTTAGGGCGCGATGCCTTTGTGCTTGCAAGCCTTGG TTGCACTGTGACTATGGTTGAGCGTCATCCTGTGGTTGCGGCATTGCTTGAAGACGGCCTGCGTCGCGCCTATCAGGATG CTGAAATCGGCGATTGGATGCGTGAGCGGATGCGTCTGTTCCACGGTTCGAGCCTTGAAGCTCTATCTAAATTGGCACAA GAGGTGGATGTGGTGTACCTCGACCCTATGTATCCCCACCGCGATAAATCGGCCCTCGTTAAAAAGGAAATGCGGGTATT CCAATCCTTAGTCGGTGCCGATTTAGATGCCGATGGTTTACTCGCCCCCGCTTTAGCTTTAGCAACGAAACGTGTCGTCG TTAAGCGCCCAGACTACGCCGAAGATTTGGACGGGGTTAAGCCAAATACGGTTATCGAAACTAAGAAAAACCGTTTTGAT GTCTACGTAAAAGCCGCGATGAAGTAG
Upstream 100 bases:
>100_bases GACAGTGATGAGTTTGCTGATGTGATTTGCTGACTGGCATATTCATAAACGAGATTTTTAGGCATAATGGCCATCATTTT CGTTGGTTAGAAGACAGCCT
Downstream 100 bases:
>100_bases GGTTTATACCTATTTATATGATTGCTCAGACAAACAAGCAAGGCACTCATTAAATATGATGACCATGTAGACAACTTGTC CGCTGGATCTTCCATTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTPIFFNQQYPTLVDICARWQLVYDANATFELRFESDTLSLHKRDEPKLDGIVVDFVTGAVAHRRKFGGGRGQSIAKAVG LKQGVMPSVVDGTAGLGRDAFVLASLGCTVTMVERHPVVAALLEDGLRRAYQDAEIGDWMRERMRLFHGSSLEALSKLAQ EVDVVYLDPMYPHRDKSALVKKEMRVFQSLVGADLDADGLLAPALALATKRVVVKRPDYAEDLDGVKPNTVIETKKNRFD VYVKAAMK
Sequences:
>Translated_248_residues MTPIFFNQQYPTLVDICARWQLVYDANATFELRFESDTLSLHKRDEPKLDGIVVDFVTGAVAHRRKFGGGRGQSIAKAVG LKQGVMPSVVDGTAGLGRDAFVLASLGCTVTMVERHPVVAALLEDGLRRAYQDAEIGDWMRERMRLFHGSSLEALSKLAQ EVDVVYLDPMYPHRDKSALVKKEMRVFQSLVGADLDADGLLAPALALATKRVVVKRPDYAEDLDGVKPNTVIETKKNRFD VYVKAAMK >Mature_247_residues TPIFFNQQYPTLVDICARWQLVYDANATFELRFESDTLSLHKRDEPKLDGIVVDFVTGAVAHRRKFGGGRGQSIAKAVGL KQGVMPSVVDGTAGLGRDAFVLASLGCTVTMVERHPVVAALLEDGLRRAYQDAEIGDWMRERMRLFHGSSLEALSKLAQE VDVVYLDPMYPHRDKSALVKKEMRVFQSLVGADLDADGLLAPALALATKRVVVKRPDYAEDLDGVKPNTVIETKKNRFDV YVKAAMK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family [H]
Homologues:
Organism=Escherichia coli, GI1789912, Length=227, Percent_Identity=65.1982378854625, Blast_Score=296, Evalue=9e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 27482; Mature: 27351
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIFFNQQYPTLVDICARWQLVYDANATFELRFESDTLSLHKRDEPKLDGIVVDFVTGA CCCEEECCCCCHHHHHHHHEEEEEECCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHH VAHRRKFGGGRGQSIAKAVGLKQGVMPSVVDGTAGLGRDAFVLASLGCTVTMVERHPVVA HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHEECCCCEEEEECCCCHHH ALLEDGLRRAYQDAEIGDWMRERMRLFHGSSLEALSKLAQEVDVVYLDPMYPHRDKSALV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHH KKEMRVFQSLVGADLDADGLLAPALALATKRVVVKRPDYAEDLDGVKPNTVIETKKNRFD HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHCCCCCCCEEECCCCCEE VYVKAAMK EEEEEECC >Mature Secondary Structure TPIFFNQQYPTLVDICARWQLVYDANATFELRFESDTLSLHKRDEPKLDGIVVDFVTGA CCEEECCCCCHHHHHHHHEEEEEECCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHH VAHRRKFGGGRGQSIAKAVGLKQGVMPSVVDGTAGLGRDAFVLASLGCTVTMVERHPVVA HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHEECCCCEEEEECCCCHHH ALLEDGLRRAYQDAEIGDWMRERMRLFHGSSLEALSKLAQEVDVVYLDPMYPHRDKSALV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHH KKEMRVFQSLVGADLDADGLLAPALALATKRVVVKRPDYAEDLDGVKPNTVIETKKNRFD HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHCCCCCCCEEECCCCCEE VYVKAAMK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA