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The map label for this gene is tonB [H]

Identifier: 160877476

GI number: 160877476

Start: 5169242

End: 5170048

Strand: Direct

Name: tonB [H]

Synonym: Sbal195_4374

Alternate gene names: 160877476

Gene position: 5169242-5170048 (Clockwise)

Preceding gene: 160877475

Following gene: 160877478

Centisome position: 96.67

GC content: 51.3

Gene sequence:

>807_bases
ATGACAGACCAAGAGTTAGCGCCGAGCATAGCGCAGTGCGGTATAGCTTTGCTGTTAGCGGCTTTTTTGCACATCGCCTT
AACGGCTGCAGTGTTTTGGTCACCAGCAGTAATAACGCCCACGGGTCAGGCTAAAGCGGTTGGCAACGGAGGGATTGAAA
TTTCCTTAGGGCCTGCAGGTAGCGCAGCGAGTGCTCTGCAACAAACGACGGCGCCAGTAGCTGAGCAAAAATCTGAGCCA
ATTACAGAGCAACTCGATAAACCAGAACCATTGCCACCCGTGGCAAAGAAAGTCACTCCCACACCACGCCCCAAACCTAA
ACCCATAACGCCAACGCCTCAAGATGAGCTAACAACTCAGTCCGAGGTAAATGAGCAGCATAGCAGCCCAACCGAAACCC
CATCGCCGACAGCATTAGCAGCGTCGGCCAACGAAGTAGGTCAAAGTGGTGAAGGCCATTCCGCAGAACAGAATAAAGCG
GCTAGCGGCGATAACATGACTGGAGGAGGTTTGCTTGGCGATACCCAGGACTACACTGCGACTTTATTAGCTTGGTTAGA
GCAACATAAGGAATATCCGCGTACGGCACGTAATCGACGCCAGCAAGGCACAGTTATGCTGTATTTTGTGTTGGACCGCC
AAGGCAGAGTCAGCGCGAGTCGAATTGAGCAAAGTTCGGGCTATCAAACATTAGATGCAGAAGCACTAAAAATGTTGGAG
CGAGCCCAGCCCTTACCTGCCATACCCGATGCAATGCCAAACGAGACGTTAGAACTTGTTGTGCCAGTGCAGTTTTTCTT
ACGTTAA

Upstream 100 bases:

>100_bases
TTGATGGTGAGTTATCGGGAAACCAGCTCGTGCATTTTACCCAAGCCTTGTATGGCGTAGGCGTTAAAAAGCTGCGTTTA
TTAACTGAGCTGGGGGCAAA

Downstream 100 bases:

>100_bases
GCTGCACCGTGAAATGGAAGATCCAGCGGACAAGTTGTCTACATGGTCATCATATTTAATGAGTGCCTTGCTTGTTTGTC
TGAGCAATCATATAAATAGG

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MTDQELAPSIAQCGIALLLAAFLHIALTAAVFWSPAVITPTGQAKAVGNGGIEISLGPAGSAASALQQTTAPVAEQKSEP
ITEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQSEVNEQHSSPTETPSPTALAASANEVGQSGEGHSAEQNKA
ASGDNMTGGGLLGDTQDYTATLLAWLEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSGYQTLDAEALKMLE
RAQPLPAIPDAMPNETLELVVPVQFFLR

Sequences:

>Translated_268_residues
MTDQELAPSIAQCGIALLLAAFLHIALTAAVFWSPAVITPTGQAKAVGNGGIEISLGPAGSAASALQQTTAPVAEQKSEP
ITEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQSEVNEQHSSPTETPSPTALAASANEVGQSGEGHSAEQNKA
ASGDNMTGGGLLGDTQDYTATLLAWLEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSGYQTLDAEALKMLE
RAQPLPAIPDAMPNETLELVVPVQFFLR
>Mature_267_residues
TDQELAPSIAQCGIALLLAAFLHIALTAAVFWSPAVITPTGQAKAVGNGGIEISLGPAGSAASALQQTTAPVAEQKSEPI
TEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQSEVNEQHSSPTETPSPTALAASANEVGQSGEGHSAEQNKAA
SGDNMTGGGLLGDTQDYTATLLAWLEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSGYQTLDAEALKMLER
AQPLPAIPDAMPNETLELVVPVQFFLR

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28462; Mature: 28331

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQELAPSIAQCGIALLLAAFLHIALTAAVFWSPAVITPTGQAKAVGNGGIEISLGPAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCEEEEECCCC
SAASALQQTTAPVAEQKSEPITEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQ
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCH
SEVNEQHSSPTETPSPTALAASANEVGQSGEGHSAEQNKAASGDNMTGGGLLGDTQDYTA
HHHHHHHCCCCCCCCCCEECCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHH
TLLAWLEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSGYQTLDAEALKMLE
HHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
RAQPLPAIPDAMPNETLELVVPVQFFLR
HCCCCCCCCCCCCCCCEEEEEHHHHHCC
>Mature Secondary Structure 
TDQELAPSIAQCGIALLLAAFLHIALTAAVFWSPAVITPTGQAKAVGNGGIEISLGPAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCEEEEECCCC
SAASALQQTTAPVAEQKSEPITEQLDKPEPLPPVAKKVTPTPRPKPKPITPTPQDELTTQ
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCH
SEVNEQHSSPTETPSPTALAASANEVGQSGEGHSAEQNKAASGDNMTGGGLLGDTQDYTA
HHHHHHHCCCCCCCCCCEECCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHH
TLLAWLEQHKEYPRTARNRRQQGTVMLYFVLDRQGRVSASRIEQSSGYQTLDAEALKMLE
HHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
RAQPLPAIPDAMPNETLELVVPVQFFLR
HCCCCCCCCCCCCCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]