| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yecO [C]
Identifier: 160877464
GI number: 160877464
Start: 5155777
End: 5156499
Strand: Reverse
Name: yecO [C]
Synonym: Sbal195_4362
Alternate gene names: 160877464
Gene position: 5156499-5155777 (Counterclockwise)
Preceding gene: 160877465
Following gene: 160877463
Centisome position: 96.43
GC content: 50.07
Gene sequence:
>723_bases ATGGTTTACAACCGATTGATTATGGATAGTTTAAAAATGAAACAAGTACACTTTGAAAATCCTGATGTAGTCCGCCGTTA TGCCCAGGGCCCAACGGCATTTGTGCCAGCCTATGAGCAGATGCAGCGCATGACGGCTCAGCTTATAAAAGAAGGTATAG GTGAAGTTGGCGAGCTGCTTGTGCTTGGCGCGGGCGGCGGATTCGAGCTCGAGGTCTTTGCTTCGCTACAATCTCAATGG CGTTACATTGGCGTAGATCCAGCTGCAGAAATGTTAAACGCTGCCAAGGCGCGCCTCGCTGCTATCGATGCGAGTGAGCG AGTGAATTGGCATCATGGTTATATTACAGATGCCCCAGAAGGTCCATTTGATGCTGCAAGCTGTTTGCTCACGCTACACT TTGTCGCTGACGATGGTAGTAAGTTGCAAACTCTGCTAGAACTTAAAAAACGCCTAAAGCCTGGCGCGCCGTTTGTGCTG GTCGATTGTTGTATTGATATCTCATCACCAAGCGCTGAATTAATGTTGGCACGCTATCGAGATTTTGCGCTGGGTTCTGG TGCCGATCCGGAGCAGGTCAGCACCACCTGTGATCGCTTAGTCAATGTGCTAAAAATGGTCAGTCCGGCGCGTAACGAGG CGCTACTTAAGAGTGCGGGCTTTACCGATGTAGAGCTTTTTTATGCGGGCCTTTCATGGCGTGGTTGGCGTGCAACGGCT TAG
Upstream 100 bases:
>100_bases GCCATTCTTGCTACTTTGTTATTTGGTGCCGCCATCGCTGTGTTACGCCCTGTGAAACAGGCTCAATAGCCGCGAATAAA AAGACGCACTAATTTTTATC
Downstream 100 bases:
>100_bases TCATTTTCTAAACGTGTAACTTAACTAACCATCATAGCTTTGCAGCGGCGGGCTATGGTGGTTAACATGTCGGCTGGCAT AGCTCATGTCGATATTTCAG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MVYNRLIMDSLKMKQVHFENPDVVRRYAQGPTAFVPAYEQMQRMTAQLIKEGIGEVGELLVLGAGGGFELEVFASLQSQW RYIGVDPAAEMLNAAKARLAAIDASERVNWHHGYITDAPEGPFDAASCLLTLHFVADDGSKLQTLLELKKRLKPGAPFVL VDCCIDISSPSAELMLARYRDFALGSGADPEQVSTTCDRLVNVLKMVSPARNEALLKSAGFTDVELFYAGLSWRGWRATA
Sequences:
>Translated_240_residues MVYNRLIMDSLKMKQVHFENPDVVRRYAQGPTAFVPAYEQMQRMTAQLIKEGIGEVGELLVLGAGGGFELEVFASLQSQW RYIGVDPAAEMLNAAKARLAAIDASERVNWHHGYITDAPEGPFDAASCLLTLHFVADDGSKLQTLLELKKRLKPGAPFVL VDCCIDISSPSAELMLARYRDFALGSGADPEQVSTTCDRLVNVLKMVSPARNEALLKSAGFTDVELFYAGLSWRGWRATA >Mature_240_residues MVYNRLIMDSLKMKQVHFENPDVVRRYAQGPTAFVPAYEQMQRMTAQLIKEGIGEVGELLVLGAGGGFELEVFASLQSQW RYIGVDPAAEMLNAAKARLAAIDASERVNWHHGYITDAPEGPFDAASCLLTLHFVADDGSKLQTLLELKKRLKPGAPFVL VDCCIDISSPSAELMLARYRDFALGSGADPEQVSTTCDRLVNVLKMVSPARNEALLKSAGFTDVELFYAGLSWRGWRATA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26386; Mature: 26386
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYNRLIMDSLKMKQVHFENPDVVRRYAQGPTAFVPAYEQMQRMTAQLIKEGIGEVGELL CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCEE VLGAGGGFELEVFASLQSQWRYIGVDPAAEMLNAAKARLAAIDASERVNWHHGYITDAPE EEECCCCEEHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCC GPFDAASCLLTLHFVADDGSKLQTLLELKKRLKPGAPFVLVDCCIDISSPSAELMLARYR CCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH DFALGSGADPEQVSTTCDRLVNVLKMVSPARNEALLKSAGFTDVELFYAGLSWRGWRATA HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCC >Mature Secondary Structure MVYNRLIMDSLKMKQVHFENPDVVRRYAQGPTAFVPAYEQMQRMTAQLIKEGIGEVGELL CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCEE VLGAGGGFELEVFASLQSQWRYIGVDPAAEMLNAAKARLAAIDASERVNWHHGYITDAPE EEECCCCEEHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCC GPFDAASCLLTLHFVADDGSKLQTLLELKKRLKPGAPFVLVDCCIDISSPSAELMLARYR CCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH DFALGSGADPEQVSTTCDRLVNVLKMVSPARNEALLKSAGFTDVELFYAGLSWRGWRATA HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA