| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877458
Identifier: 160877458
GI number: 160877458
Start: 5148934
End: 5149818
Strand: Reverse
Name: 160877458
Synonym: Sbal195_4356
Alternate gene names: NA
Gene position: 5149818-5148934 (Counterclockwise)
Preceding gene: 160877459
Following gene: 160877457
Centisome position: 96.31
GC content: 48.47
Gene sequence:
>885_bases ATGAAACAGACAATTGAAGCACAAAACATCACTGAATCAATGCAGAATACTCAAGTCATCGGAGGCACCAAAATGTCGAA ATTTAGCTCTTTATTCAAACATCGCAAGTTGCAGATGTTTGCTGTCTCGGGTGTCGCCATGGCCATGCTGGTGGTTTCCT TGCCTTCGGTGAGCACCATGGCCTATGCCAAGGACAGCAGTTTATCGGCGGCGCAGCAGCAAGAGGTGCGAGCGATTCTT AAAGATGCCTTGATCAATGATCCTGACCTAATGAGAGAGGCGATTATTGCGTGGCAAGCAAGGGAGCAAGAGGGGGCAAA TACAGCCATGCAAACCAGTCTTGTGACCCATCATAAAGCCATGTATGAGACCAAAAGCGATCCGTGGAAGGGCGCTGCGA CACCTGAGATTGAGATGGTGTACTTCACCGATTTTAACTGCCCATACTGCAAGAAAATCGAGCCTTCGCTGAACCAGCTG ATTGAAGAATTTCCTCAGTTAAAAATCATAGTCAAAATGGTGCCGCTGCAGGGCGAAGGCTCCAAAATGGCGGTCGATTT TGCCCAAACGGTTTGGTTAAACGAGCCTGAAAAGTATCTTAAGGTGAAGGATATGTTGATGTCGAGCCCGCGTGGACTCG ATGCCGCCGCCATCGCTAAGGTCGCTAAACTGACGGCAACCGAGCGCTGGGTGGGTAACACAGATGAGCGCGTCGCTAAA ATGGTCGATGATAATGTTAATTTAATGAATGAGTTAGGCATAGGTGGCACGCCAAGTATGATAGTGGCCGATACGCTTAT TCCCGGACTAGTGCCTTACGAAGTGTTAAAAGAGCAGCTTGAAGCCGCGATTGCCGCTAAAGATAAGACGCAGAAGAGCA GTTAA
Upstream 100 bases:
>100_bases CGGCAATATCACTGGCGAGTCTCATTCAATAGCGAGTCGAGTGACACTCAACAAATACTCAGGTCAGGAAGCCCCTGACC TGAAACAATGGAAATCGATT
Downstream 100 bases:
>100_bases GATGCAGCCAAAGGAAACTGAAAATATGAGCGCCGAACAAGTTTCGATATCTTTACCTAAACGCATATTGGGCTGGATTA AGCAGTTGGCACTTTTGCTG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Suppressor For Copper-Sensitivity C; DsbA Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity ScsC; Secreted Protein Suppressor For Copper-Sensitivity C; Metal Resistance Protein; DSBA-Like Thioredoxin Domain Protein; Disulfide Oxidoreductase; Protein-Disulfide Isomerase; ThiolDisulfide Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; Thioredoxin Domain Protein; Copper-Sensitivity Suppressor C Protein; Copper Sensitivity Protein ScsC; Secreted Copper-Sensitivity Suppressor C
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKQTIEAQNITESMQNTQVIGGTKMSKFSSLFKHRKLQMFAVSGVAMAMLVVSLPSVSTMAYAKDSSLSAAQQQEVRAIL KDALINDPDLMREAIIAWQAREQEGANTAMQTSLVTHHKAMYETKSDPWKGAATPEIEMVYFTDFNCPYCKKIEPSLNQL IEEFPQLKIIVKMVPLQGEGSKMAVDFAQTVWLNEPEKYLKVKDMLMSSPRGLDAAAIAKVAKLTATERWVGNTDERVAK MVDDNVNLMNELGIGGTPSMIVADTLIPGLVPYEVLKEQLEAAIAAKDKTQKSS
Sequences:
>Translated_294_residues MKQTIEAQNITESMQNTQVIGGTKMSKFSSLFKHRKLQMFAVSGVAMAMLVVSLPSVSTMAYAKDSSLSAAQQQEVRAIL KDALINDPDLMREAIIAWQAREQEGANTAMQTSLVTHHKAMYETKSDPWKGAATPEIEMVYFTDFNCPYCKKIEPSLNQL IEEFPQLKIIVKMVPLQGEGSKMAVDFAQTVWLNEPEKYLKVKDMLMSSPRGLDAAAIAKVAKLTATERWVGNTDERVAK MVDDNVNLMNELGIGGTPSMIVADTLIPGLVPYEVLKEQLEAAIAAKDKTQKSS >Mature_294_residues MKQTIEAQNITESMQNTQVIGGTKMSKFSSLFKHRKLQMFAVSGVAMAMLVVSLPSVSTMAYAKDSSLSAAQQQEVRAIL KDALINDPDLMREAIIAWQAREQEGANTAMQTSLVTHHKAMYETKSDPWKGAATPEIEMVYFTDFNCPYCKKIEPSLNQL IEEFPQLKIIVKMVPLQGEGSKMAVDFAQTVWLNEPEKYLKVKDMLMSSPRGLDAAAIAKVAKLTATERWVGNTDERVAK MVDDNVNLMNELGIGGTPSMIVADTLIPGLVPYEVLKEQLEAAIAAKDKTQKSS
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32466; Mature: 32466
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTIEAQNITESMQNTQVIGGTKMSKFSSLFKHRKLQMFAVSGVAMAMLVVSLPSVSTM CCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AYAKDSSLSAAQQQEVRAILKDALINDPDLMREAIIAWQAREQEGANTAMQTSLVTHHKA HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MYETKSDPWKGAATPEIEMVYFTDFNCPYCKKIEPSLNQLIEEFPQLKIIVKMVPLQGEG HHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEEEECCCCCC SKMAVDFAQTVWLNEPEKYLKVKDMLMSSPRGLDAAAIAKVAKLTATERWVGNTDERVAK CEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH MVDDNVNLMNELGIGGTPSMIVADTLIPGLVPYEVLKEQLEAAIAAKDKTQKSS HHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQTIEAQNITESMQNTQVIGGTKMSKFSSLFKHRKLQMFAVSGVAMAMLVVSLPSVSTM CCCCCCHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH AYAKDSSLSAAQQQEVRAILKDALINDPDLMREAIIAWQAREQEGANTAMQTSLVTHHKA HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH MYETKSDPWKGAATPEIEMVYFTDFNCPYCKKIEPSLNQLIEEFPQLKIIVKMVPLQGEG HHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCHHEEEEEEECCCCCC SKMAVDFAQTVWLNEPEKYLKVKDMLMSSPRGLDAAAIAKVAKLTATERWVGNTDERVAK CEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH MVDDNVNLMNELGIGGTPSMIVADTLIPGLVPYEVLKEQLEAAIAAKDKTQKSS HHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA