| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is dsbE [C]
Identifier: 160877457
GI number: 160877457
Start: 5148384
End: 5148908
Strand: Reverse
Name: dsbE [C]
Synonym: Sbal195_4355
Alternate gene names: 160877457
Gene position: 5148908-5148384 (Counterclockwise)
Preceding gene: 160877458
Following gene: 160877450
Centisome position: 96.29
GC content: 47.81
Gene sequence:
>525_bases ATGAGCGCCGAACAAGTTTCGATATCTTTACCTAAACGCATATTGGGCTGGATTAAGCAGTTGGCACTTTTGCTGCTCAT TGTCATTATCGTGACCAGCGTGATGGACATCTGGCGTGGCAAAGATATCCCACGGGATAATTTGCCGCAGCTACAAGGGA CGACCTTGGCTGGGGAGATGCTTGATATTGCCACGCTCAGCCAAGATCAGGCGGTATTAGTGTACTTCTGGGGCACTTGG TGTCCTGTGTGTAATTTTGTCAGCCCAGCGGTCAATCAAATGTCGGCCTATTACCCCGTGGTGACGGTTGCCATGAATTC GGGGGAGGATGAGAAACTGAGAAAATATCTTCAGCATCAGGATTATGGCTTTGACACTATTAACGATAGTGACAGCAAGA TTGCCCGTGATTGGTCATTGCAGGCGACGCCAACCATTATGATCTTTAAAGATGGCGAGTTAAAACACTACACCACTGGC TTTACTAGTCTGCCTGGTATGTGGTGGCGAATGATGTTCACTTAG
Upstream 100 bases:
>100_bases GTGCCTTACGAAGTGTTAAAAGAGCAGCTTGAAGCCGCGATTGCCGCTAAAGATAAGACGCAGAAGAGCAGTTAAGATGC AGCCAAAGGAAACTGAAAAT
Downstream 100 bases:
>100_bases AAGTGATACATCAGGGGGCTGTTTTAAGGGAGAAAAAAAGCGCTAATCTAGGTTAGCGCTTTTGTATTATCAACTTATTT CAGGACTAGACCATTAGCTG
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSAEQVSISLPKRILGWIKQLALLLLIVIIVTSVMDIWRGKDIPRDNLPQLQGTTLAGEMLDIATLSQDQAVLVYFWGTW CPVCNFVSPAVNQMSAYYPVVTVAMNSGEDEKLRKYLQHQDYGFDTINDSDSKIARDWSLQATPTIMIFKDGELKHYTTG FTSLPGMWWRMMFT
Sequences:
>Translated_174_residues MSAEQVSISLPKRILGWIKQLALLLLIVIIVTSVMDIWRGKDIPRDNLPQLQGTTLAGEMLDIATLSQDQAVLVYFWGTW CPVCNFVSPAVNQMSAYYPVVTVAMNSGEDEKLRKYLQHQDYGFDTINDSDSKIARDWSLQATPTIMIFKDGELKHYTTG FTSLPGMWWRMMFT >Mature_173_residues SAEQVSISLPKRILGWIKQLALLLLIVIIVTSVMDIWRGKDIPRDNLPQLQGTTLAGEMLDIATLSQDQAVLVYFWGTWC PVCNFVSPAVNQMSAYYPVVTVAMNSGEDEKLRKYLQHQDYGFDTINDSDSKIARDWSLQATPTIMIFKDGELKHYTTGF TSLPGMWWRMMFT
Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 19801; Mature: 19670
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEQVSISLPKRILGWIKQLALLLLIVIIVTSVMDIWRGKDIPRDNLPQLQGTTLAGEM CCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LDIATLSQDQAVLVYFWGTWCPVCNFVSPAVNQMSAYYPVVTVAMNSGEDEKLRKYLQHQ HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHC DYGFDTINDSDSKIARDWSLQATPTIMIFKDGELKHYTTGFTSLPGMWWRMMFT CCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHEECC >Mature Secondary Structure SAEQVSISLPKRILGWIKQLALLLLIVIIVTSVMDIWRGKDIPRDNLPQLQGTTLAGEM CCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH LDIATLSQDQAVLVYFWGTWCPVCNFVSPAVNQMSAYYPVVTVAMNSGEDEKLRKYLQHQ HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHC DYGFDTINDSDSKIARDWSLQATPTIMIFKDGELKHYTTGFTSLPGMWWRMMFT CCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]