Click here to switch to the map view.

The map label for this gene is mcpB [H]

Identifier: 160877442

GI number: 160877442

Start: 5129865

End: 5131847

Strand: Direct

Name: mcpB [H]

Synonym: Sbal195_4340

Alternate gene names: 160877442

Gene position: 5129865-5131847 (Clockwise)

Preceding gene: 160877441

Following gene: 160877445

Centisome position: 95.93

GC content: 50.13

Gene sequence:

>1983_bases
ATGAAAATTTCAACGCTGTCGCTCTCTGCTTCTGCCCTGTTGTTATTGCTCGCGGGATTATTAGCGGCCGTAGTGCTGTG
GAGTAGTGATCAGCGACAAAATATAGAACAGCAAACACTCACACTACAAAGCATACAAGAAGACTTCCTCGTCGGCGTAC
GCCGCGATCTCGACGGCTATCTCGCCAGCGGCAATTCTAGCCAACTTGAGCAAGCTAAAACTAAACTCAGCGCCATTAAG
AACCAGCTCACAGAACTTAATCTCGCCACCATGGGCGCTAACGATAATGACTTGCAAGCAAGTCTCAGCAGCTTCATTCA
AGATTTAGATACCAAGTACCGCGCCGCGGGTAAACTCGCTGGCAACCCCAGGCAACTGCTGGCCCACGCCGAATCTGAAA
TGCTCGACTATAACCGTCGTTTAGGCAATTATGCCGATAAAGGCTTAGCCACAAATGCAGAGATCGCCGAACAATATCTG
CAATTGAGCCGCGATTTACCTTCCATCGTCTATCAACTTTCCCAGCTGACCGATGGCTATCTGATCGGCAAAAATCAGCA
ACTCAAGGGCATTTTAGACAGCACCAGCAAAGAGCTAAATACATGGCACGACGCCCTCAGCGCACTGCCGTTAATCGGTG
TATATGAGCAGCAAGAAGCCGATGAGTTTGCCCTCGGTGCCAGCGAACCAGAACAGATTGAAGTCGGCGAAAGTGACCGC
AGTGAACTGCTGAGTCTCGCCAATCGATACAACAAAGAAGTCGCCAATACCCACCAATTGCTGCAAGCCAACCAAGAGAT
GCAAGATCAACTCATTCAAGCGATTAGCAATGTGGAACAACAGCTTATTGGCTTAGGTGAGGCTCAGGCAGCGAAGAATC
AACAGCTTAAATATGAGCTACAACTGATCCTCTACACTATGGTTTCGATCATGGCCTTGTTTGCCATAGGTTATTTAATT
CTGCAGCAAAATCGCGTCGTCAAACCGCTGAAACGTCTTAATCAAGCCTTTATGAAATTAAGCGAATCGAACAGCCGCGA
GCGTTTAGATATTAATCGTCGCTGCGAGACGGGCCAAATCGCGGGTCATTTCAACCAGTTGCTGCAAAGGTTTGAACAGG
AAGACGAGGCACAACGCCAGCAAATCACTAAGGTTTCTCAATCATTAAGCCAACTGGTTGCGCGCATTACTCAGCTATCG
CAGCACACAGAGCACACTCAGACGATTGTGGCCGATACGCAAACACAAACCGAACATATCCGCAGCCTCGCCAATGAGGT
GAGCCACACTTCGGCACTCGTGGAAGACAGCGCCGCCGAAACCATGCGCCAAATGCAGTCGAGCCAAACTGAAGCCGAGG
CCGTACTCAGCGCAACTGAGCAGACGCAAACCGCCGTTGGCCTTTGCCATGCTTCCCTCGAAAGTCTGAATAACTCAGTG
ACGGATGTGTCGAAAATCATTGATGTAATTGGCAATATCGCCGAACAAACTAACTTACTCGCCCTCAATGCCGCCATTGA
AGCTGCGCGGGCGGGAGAGCAAGGTCGCGGCTTTGCCGTGGTTGCCGATGAAGTGCGAAATTTAAGTCAGCGCACCCAAG
TGTCCTTAAACGAAATCGTGAAAATTCTGCAGCAACTGACCCAGTCGAATCATGCCCTCAGTGAGAGTGTCGATGGCATA
GCACAGGCCACCAGCAGCCAAAAACTGCGCGCTCAAAGCCTATGGCAAGTGGCGCAAACGGTGCAAAACCAAGCGAGCGA
CATGGCCAATACCGCTAAACAAGGCTCGCTCAATGCCAAGGAGCAAGTCGATTATCTCGATCAATTTGTGCGCACTATGG
ATAGCTTAAAAGAGCAGGCACAAACCAGTTCACAACAGAGTGAAGTCATCGCCCAAGAAGTGCAGCAGAGCGTCGAGGAT
ATTGAGACCAGTTTAGGCATTGCCGATGCTGGTAACTTAGCACCACAGTCGCGGGCCGCTTAA

Upstream 100 bases:

>100_bases
ACAACGCTGACATTCATGTGGGCGCTTGTCATATTAATGTCACGCTAAATTCATAAACTCAGAACAGTTAACTGGCTCTG
ACAATTATGAAGATTGCAAA

Downstream 100 bases:

>100_bases
CCCGCTAAAATATCAATAAAAATGGGAGCCTAAGCTCCCATTTATTTTGATGTCCGATTACGTTCGGACCTTAATCATTA
CAGTGCAGCTAAAACCACTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MKISTLSLSASALLLLLAGLLAAVVLWSSDQRQNIEQQTLTLQSIQEDFLVGVRRDLDGYLASGNSSQLEQAKTKLSAIK
NQLTELNLATMGANDNDLQASLSSFIQDLDTKYRAAGKLAGNPRQLLAHAESEMLDYNRRLGNYADKGLATNAEIAEQYL
QLSRDLPSIVYQLSQLTDGYLIGKNQQLKGILDSTSKELNTWHDALSALPLIGVYEQQEADEFALGASEPEQIEVGESDR
SELLSLANRYNKEVANTHQLLQANQEMQDQLIQAISNVEQQLIGLGEAQAAKNQQLKYELQLILYTMVSIMALFAIGYLI
LQQNRVVKPLKRLNQAFMKLSESNSRERLDINRRCETGQIAGHFNQLLQRFEQEDEAQRQQITKVSQSLSQLVARITQLS
QHTEHTQTIVADTQTQTEHIRSLANEVSHTSALVEDSAAETMRQMQSSQTEAEAVLSATEQTQTAVGLCHASLESLNNSV
TDVSKIIDVIGNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLSQRTQVSLNEIVKILQQLTQSNHALSESVDGI
AQATSSQKLRAQSLWQVAQTVQNQASDMANTAKQGSLNAKEQVDYLDQFVRTMDSLKEQAQTSSQQSEVIAQEVQQSVED
IETSLGIADAGNLAPQSRAA

Sequences:

>Translated_660_residues
MKISTLSLSASALLLLLAGLLAAVVLWSSDQRQNIEQQTLTLQSIQEDFLVGVRRDLDGYLASGNSSQLEQAKTKLSAIK
NQLTELNLATMGANDNDLQASLSSFIQDLDTKYRAAGKLAGNPRQLLAHAESEMLDYNRRLGNYADKGLATNAEIAEQYL
QLSRDLPSIVYQLSQLTDGYLIGKNQQLKGILDSTSKELNTWHDALSALPLIGVYEQQEADEFALGASEPEQIEVGESDR
SELLSLANRYNKEVANTHQLLQANQEMQDQLIQAISNVEQQLIGLGEAQAAKNQQLKYELQLILYTMVSIMALFAIGYLI
LQQNRVVKPLKRLNQAFMKLSESNSRERLDINRRCETGQIAGHFNQLLQRFEQEDEAQRQQITKVSQSLSQLVARITQLS
QHTEHTQTIVADTQTQTEHIRSLANEVSHTSALVEDSAAETMRQMQSSQTEAEAVLSATEQTQTAVGLCHASLESLNNSV
TDVSKIIDVIGNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLSQRTQVSLNEIVKILQQLTQSNHALSESVDGI
AQATSSQKLRAQSLWQVAQTVQNQASDMANTAKQGSLNAKEQVDYLDQFVRTMDSLKEQAQTSSQQSEVIAQEVQQSVED
IETSLGIADAGNLAPQSRAA
>Mature_660_residues
MKISTLSLSASALLLLLAGLLAAVVLWSSDQRQNIEQQTLTLQSIQEDFLVGVRRDLDGYLASGNSSQLEQAKTKLSAIK
NQLTELNLATMGANDNDLQASLSSFIQDLDTKYRAAGKLAGNPRQLLAHAESEMLDYNRRLGNYADKGLATNAEIAEQYL
QLSRDLPSIVYQLSQLTDGYLIGKNQQLKGILDSTSKELNTWHDALSALPLIGVYEQQEADEFALGASEPEQIEVGESDR
SELLSLANRYNKEVANTHQLLQANQEMQDQLIQAISNVEQQLIGLGEAQAAKNQQLKYELQLILYTMVSIMALFAIGYLI
LQQNRVVKPLKRLNQAFMKLSESNSRERLDINRRCETGQIAGHFNQLLQRFEQEDEAQRQQITKVSQSLSQLVARITQLS
QHTEHTQTIVADTQTQTEHIRSLANEVSHTSALVEDSAAETMRQMQSSQTEAEAVLSATEQTQTAVGLCHASLESLNNSV
TDVSKIIDVIGNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLSQRTQVSLNEIVKILQQLTQSNHALSESVDGI
AQATSSQKLRAQSLWQVAQTVQNQASDMANTAKQGSLNAKEQVDYLDQFVRTMDSLKEQAQTSSQQSEVIAQEVQQSVED
IETSLGIADAGNLAPQSRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=275, Percent_Identity=28.7272727272727, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI2367378, Length=310, Percent_Identity=27.4193548387097, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789453, Length=284, Percent_Identity=29.9295774647887, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788194, Length=260, Percent_Identity=29.2307692307692, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788195, Length=219, Percent_Identity=29.6803652968037, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72560; Mature: 72560

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTLSLSASALLLLLAGLLAAVVLWSSDQRQNIEQQTLTLQSIQEDFLVGVRRDLDGY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASGNSSQLEQAKTKLSAIKNQLTELNLATMGANDNDLQASLSSFIQDLDTKYRAAGKLA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GNPRQLLAHAESEMLDYNRRLGNYADKGLATNAEIAEQYLQLSRDLPSIVYQLSQLTDGY
CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCE
LIGKNQQLKGILDSTSKELNTWHDALSALPLIGVYEQQEADEFALGASEPEQIEVGESDR
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHCHHHHHCCCCCCCCEECCCCCH
SELLSLANRYNKEVANTHQLLQANQEMQDQLIQAISNVEQQLIGLGEAQAAKNQQLKYEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHH
QLILYTMVSIMALFAIGYLILQQNRVVKPLKRLNQAFMKLSESNSRERLDINRRCETGQI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH
AGHFNQLLQRFEQEDEAQRQQITKVSQSLSQLVARITQLSQHTEHTQTIVADTQTQTEHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RSLANEVSHTSALVEDSAAETMRQMQSSQTEAEAVLSATEQTQTAVGLCHASLESLNNSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TDVSKIIDVIGNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLSQRTQVSLNEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KILQQLTQSNHALSESVDGIAQATSSQKLRAQSLWQVAQTVQNQASDMANTAKQGSLNAK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EQVDYLDQFVRTMDSLKEQAQTSSQQSEVIAQEVQQSVEDIETSLGIADAGNLAPQSRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKISTLSLSASALLLLLAGLLAAVVLWSSDQRQNIEQQTLTLQSIQEDFLVGVRRDLDGY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASGNSSQLEQAKTKLSAIKNQLTELNLATMGANDNDLQASLSSFIQDLDTKYRAAGKLA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
GNPRQLLAHAESEMLDYNRRLGNYADKGLATNAEIAEQYLQLSRDLPSIVYQLSQLTDGY
CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCE
LIGKNQQLKGILDSTSKELNTWHDALSALPLIGVYEQQEADEFALGASEPEQIEVGESDR
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHCHHHHHCCCCCCCCEECCCCCH
SELLSLANRYNKEVANTHQLLQANQEMQDQLIQAISNVEQQLIGLGEAQAAKNQQLKYEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHH
QLILYTMVSIMALFAIGYLILQQNRVVKPLKRLNQAFMKLSESNSRERLDINRRCETGQI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH
AGHFNQLLQRFEQEDEAQRQQITKVSQSLSQLVARITQLSQHTEHTQTIVADTQTQTEHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RSLANEVSHTSALVEDSAAETMRQMQSSQTEAEAVLSATEQTQTAVGLCHASLESLNNSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TDVSKIIDVIGNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLSQRTQVSLNEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KILQQLTQSNHALSESVDGIAQATSSQKLRAQSLWQVAQTVQNQASDMANTAKQGSLNAK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EQVDYLDQFVRTMDSLKEQAQTSSQQSEVIAQEVQQSVEDIETSLGIADAGNLAPQSRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]