| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877431
Identifier: 160877431
GI number: 160877431
Start: 5112918
End: 5113664
Strand: Reverse
Name: 160877431
Synonym: Sbal195_4329
Alternate gene names: NA
Gene position: 5113664-5112918 (Counterclockwise)
Preceding gene: 160877432
Following gene: 160877430
Centisome position: 95.63
GC content: 39.76
Gene sequence:
>747_bases ATGGACGCTAAACAGGCGCTATCAAATGCAAATGCGGCATCTACGCTGAAAGATGTTATTCAGGCGATAAGCTATTCTTT GAAGCTGCATGGTATCTGTGGTTTCTGGTTTCAGGGAGTTCCACATTGTGCGTATGAAAATTATCACTTTCCAAAAGATA CCAATCTGTTCTCTCCTACGGCGTTACGAAAACCTATCGCCAGTATAGCTTCTTCCCCTGTTGTCGCTGAATTACAGCGT TTTTATTTAAATCAGGTTGCAGCCAATGATTTCAATTTTGGATTTTCATTAGATACTTCAAAATCTTATATGTATAGATT CACGAGTGAAAAAAATGATAAGACCAGCCTACTGTTTAGTAAGCATAATATTCAAAGTGTTTTGAGCTGGCCCATCTCAT GCCACACTAATCGTCATTGGGCAGGCCGCTTCATACTACTCAGCCATCTTAGCGACTCAGAGATAGCATTAGAGGGATTG GCTGATACTTTAAAGGAAGCCCAAAACAAGCTGTTTGAATGTAATAAACAATTGTTCAATCCATTTCTACAAAGCTCGCT ACTTAAAGATAATGCGAGAGATATCCTGCTCATGGTCGCAAACGGCCTTCAGAATGACGAAATTTCAACTCAGCTCCCGA TAAGTGTCAGAGGAGTTGAATATCATATGGAAGCTATGCGCAAGAAATTTGGGGCTACAAATAGAGCAAACTTAATCCAT TTAGCCCATCAATATGAGTTGATCTAA
Upstream 100 bases:
>100_bases GTTTTAATTCTGAGACAAGGTGTAAGTATCTGTATCAATAAGTTTTATTTGTTAATTTTATTGATGTACCTTCCTATGTT ATTTCGTTTGGAGGGTATTT
Downstream 100 bases:
>100_bases ATATGTTGATATTACTGGTTGAAGATAATCGACTTCTCTCTAACAACATCATTCAATATCTTGAATTGAGTGGCATAGAG TGCGATTACGCTTTCAACCT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MDAKQALSNANAASTLKDVIQAISYSLKLHGICGFWFQGVPHCAYENYHFPKDTNLFSPTALRKPIASIASSPVVAELQR FYLNQVAANDFNFGFSLDTSKSYMYRFTSEKNDKTSLLFSKHNIQSVLSWPISCHTNRHWAGRFILLSHLSDSEIALEGL ADTLKEAQNKLFECNKQLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISVRGVEYHMEAMRKKFGATNRANLIH LAHQYELI
Sequences:
>Translated_248_residues MDAKQALSNANAASTLKDVIQAISYSLKLHGICGFWFQGVPHCAYENYHFPKDTNLFSPTALRKPIASIASSPVVAELQR FYLNQVAANDFNFGFSLDTSKSYMYRFTSEKNDKTSLLFSKHNIQSVLSWPISCHTNRHWAGRFILLSHLSDSEIALEGL ADTLKEAQNKLFECNKQLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISVRGVEYHMEAMRKKFGATNRANLIH LAHQYELI >Mature_248_residues MDAKQALSNANAASTLKDVIQAISYSLKLHGICGFWFQGVPHCAYENYHFPKDTNLFSPTALRKPIASIASSPVVAELQR FYLNQVAANDFNFGFSLDTSKSYMYRFTSEKNDKTSLLFSKHNIQSVLSWPISCHTNRHWAGRFILLSHLSDSEIALEGL ADTLKEAQNKLFECNKQLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISVRGVEYHMEAMRKKFGATNRANLIH LAHQYELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28033; Mature: 28033
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKQALSNANAASTLKDVIQAISYSLKLHGICGFWFQGVPHCAYENYHFPKDTNLFSPT CCHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHCCCCCHHCCCCCCCCCCCCCCCH ALRKPIASIASSPVVAELQRFYLNQVAANDFNFGFSLDTSKSYMYRFTSEKNDKTSLLFS HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEE KHNIQSVLSWPISCHTNRHWAGRFILLSHLSDSEIALEGLADTLKEAQNKLFECNKQLFN HHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLQSSLLKDNARDILLMVANGLQNDEISTQLPISVRGVEYHMEAMRKKFGATNRANLIH HHHHHHHHHCCHHHEEHEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCEEE LAHQYELI EHHHHCCC >Mature Secondary Structure MDAKQALSNANAASTLKDVIQAISYSLKLHGICGFWFQGVPHCAYENYHFPKDTNLFSPT CCHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHCCCCCHHCCCCCCCCCCCCCCCH ALRKPIASIASSPVVAELQRFYLNQVAANDFNFGFSLDTSKSYMYRFTSEKNDKTSLLFS HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEE KHNIQSVLSWPISCHTNRHWAGRFILLSHLSDSEIALEGLADTLKEAQNKLFECNKQLFN HHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLQSSLLKDNARDILLMVANGLQNDEISTQLPISVRGVEYHMEAMRKKFGATNRANLIH HHHHHHHHHCCHHHEEHEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCEEE LAHQYELI EHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA