| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cusB [H]
Identifier: 160877405
GI number: 160877405
Start: 5081564
End: 5083108
Strand: Direct
Name: cusB [H]
Synonym: Sbal195_4303
Alternate gene names: 160877405
Gene position: 5081564-5083108 (Clockwise)
Preceding gene: 160877404
Following gene: 160877406
Centisome position: 95.03
GC content: 49.45
Gene sequence:
>1545_bases ATGAACCAATTTAATACAGTAAAAAAGCAGGCCCCTAAGGCCGTACTGATCTTGAGTAGCTTACTCATCAGTACGCCTTG GTTGAGCCATGCCCAGCTGGCGAACACACAAGAACCCGTTGCGACCGAAGCCGCTGCGACAAATTCTGCAACTGCGCCAA AGAATAATCCGTTAAATCAAGTGAAAACCTACACTTGTCCTATGCATCCCGAAGTGATCAGCCATGAGCCGGGTCGCTGC CCTAAGTGCAATATGTTTTTAGTTGAGAAACTCGATGCCGCGAATCCTGCGGCCGAGCATGCACAGCATCAAGCCGCAGA TCACCAAGCCTCTGAGCATGGGCAAACCTCTGCCGCCAAAGCTTCGAGTCAGGTATTCGATACCCCAACCCCTAAGGCCG ACAGTTTAGTTAAAGCCCAAAATCATGTGACAACAATCAAGTATGTTTGCCCTATGCATGCCCACATTATCAGTGACGTA CCCGGCACTTGCCCTATCTGCGGTATGAACTTAGAAAAGGTCGAAACGGGCGGTAATACCCAAGAAATCAACATCAATGT ATCCGGCAGCATGCAGCAAGCGTTGGCGTTAAAGGTGGCCAAGGTTGAACGCGACACACTGTGGAAATTTGTCGAAACCG TCGGTCAAATCGACTATGACGAAAGCCAAATCACCCATATCCATGCCCGCGTTACTGGCTGGATTGAAAAACTGATGATC AAATCCGTGGGTGATACCGTCAAGAAAGACCAACTGATCTACGAGATCTATTCCCCCGATTTAATCAACGCCCAAGATGA CTACCTGCTCGCGATGGACACTGCTAAAGCAAACGGCCAAGGCCGCTACAAAGATTTGGTGCGCAATGCGGGCTTACGCT TATCCTTCCTTGGTTTTAACGACAGGCAAATCAAACAATTAGCCGAGTCACATCAAACCCAATATCGGGTACCTTTCTAT GCCAAAGAAGACGGCATAGTGAAAGCCCTCGACATTCGCGATGGCATGTATATTCAGCCGTCGACCGAAGTCATGTCTGT GGTTGATCTCTCTAAAGTCTGGGTGATTGCCGACGTTTTTGAGAACGAGCAAAGCTGGATTGCCAAAGGTCAGAAGGCCG AAATTGCCGTTCCCGCCATGAATATCAGCGGCATCGAAGGCACGATCGATTACATCTACCCTGAGCTTGATCCTGTCACT CGCAGCCTGCGAGTACGAGTAGTGCTCAACAATACCGAGGTAGATTTAAGACCTAAAACTCTCGCCAAAGTCTCACTATT CGGTGGCCCGAATAAAGATGTGCTAGTGATCCCGCAGGAAGCTTTAATTCAAACGGGCAAAGAAAACCGCGTGATCGTCA AGCAAACCGACGACAGCTTTACCGCCAAGGCCGTAACCGTCGGCATGATGAGCCAAGGCAAGGCCGAGATTATTTCAGGC CTGAATGAAGGTGAACGTGTGGTGATTTCGGGGCAATTCTTACTCGACTCCGAGGCTAGCCTCAAGGGCAGTTTAATGCG TTTAAGCAGCGGTCATCAGCACTAG
Upstream 100 bases:
>100_bases TGGTATGGATTTAGAGCCAAAGGCGACGGAAGTAAAAACAGCTGAAGGTACGATGCACAACGCGCACGAACACCACTAAG CTAGGCTGGAGATGAGGCAT
Downstream 100 bases:
>100_bases GAGCGCGTTATGTTGAAATATATTATCGAGGCGTCCATCAGGCAGCGATTTATGGTGTTGATTATCGCCATCATGATCAC TGTTTGGGGCGTACAGGAGC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPVATEAAATNSATAPKNNPLNQVKTYTCPMHPEVISHEPGRC PKCNMFLVEKLDAANPAAEHAQHQAADHQASEHGQTSAAKASSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDV PGTCPICGMNLEKVETGGNTQEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDYDESQITHIHARVTGWIEKLMI KSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKANGQGRYKDLVRNAGLRLSFLGFNDRQIKQLAESHQTQYRVPFY AKEDGIVKALDIRDGMYIQPSTEVMSVVDLSKVWVIADVFENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDPVT RSLRVRVVLNNTEVDLRPKTLAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDDSFTAKAVTVGMMSQGKAEIISG LNEGERVVISGQFLLDSEASLKGSLMRLSSGHQH
Sequences:
>Translated_514_residues MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPVATEAAATNSATAPKNNPLNQVKTYTCPMHPEVISHEPGRC PKCNMFLVEKLDAANPAAEHAQHQAADHQASEHGQTSAAKASSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDV PGTCPICGMNLEKVETGGNTQEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDYDESQITHIHARVTGWIEKLMI KSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKANGQGRYKDLVRNAGLRLSFLGFNDRQIKQLAESHQTQYRVPFY AKEDGIVKALDIRDGMYIQPSTEVMSVVDLSKVWVIADVFENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDPVT RSLRVRVVLNNTEVDLRPKTLAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDDSFTAKAVTVGMMSQGKAEIISG LNEGERVVISGQFLLDSEASLKGSLMRLSSGHQH >Mature_514_residues MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPVATEAAATNSATAPKNNPLNQVKTYTCPMHPEVISHEPGRC PKCNMFLVEKLDAANPAAEHAQHQAADHQASEHGQTSAAKASSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDV PGTCPICGMNLEKVETGGNTQEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDYDESQITHIHARVTGWIEKLMI KSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKANGQGRYKDLVRNAGLRLSFLGFNDRQIKQLAESHQTQYRVPFY AKEDGIVKALDIRDGMYIQPSTEVMSVVDLSKVWVIADVFENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDPVT RSLRVRVVLNNTEVDLRPKTLAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDDSFTAKAVTVGMMSQGKAEIISG LNEGERVVISGQFLLDSEASLKGSLMRLSSGHQH
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=411, Percent_Identity=31.1435523114355, Blast_Score=172, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56418; Mature: 56418
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPVATEAAATNSATAPKNNPLNQ CCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHH VKTYTCPMHPEVISHEPGRCPKCNMFLVEKLDAANPAAEHAQHQAADHQASEHGQTSAAK HEEEECCCCCHHHCCCCCCCCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ASSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDVPGTCPICGMNLEKVETGGNT HCCCCCCCCCCCCHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCEECCCHHEEECCCCE QEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDYDESQITHIHARVTGWIEKLMI EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHH KSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKANGQGRYKDLVRNAGLRLSFLGFN HHHCCHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEECCC DRQIKQLAESHQTQYRVPFYAKEDGIVKALDIRDGMYIQPSTEVMSVVDLSKVWVIADVF HHHHHHHHHHCCCEEECCEEECCCCCEEEEECCCCEEECCCHHHHHHHHHHHHEEEEEHH ENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDPVTRSLRVRVVLNNTEVDLRPKT CCCHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEECCEEECCCCC LAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDDSFTAKAVTVGMMSQGKAEIISG EEEEEECCCCCCCEEEECHHHHHHCCCCCEEEEEECCCCCEEEEEEEEHHCCCHHHHHHC LNEGERVVISGQFLLDSEASLKGSLMRLSSGHQH CCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MNQFNTVKKQAPKAVLILSSLLISTPWLSHAQLANTQEPVATEAAATNSATAPKNNPLNQ CCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHH VKTYTCPMHPEVISHEPGRCPKCNMFLVEKLDAANPAAEHAQHQAADHQASEHGQTSAAK HEEEECCCCCHHHCCCCCCCCCCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH ASSQVFDTPTPKADSLVKAQNHVTTIKYVCPMHAHIISDVPGTCPICGMNLEKVETGGNT HCCCCCCCCCCCCHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCCEECCCHHEEECCCCE QEININVSGSMQQALALKVAKVERDTLWKFVETVGQIDYDESQITHIHARVTGWIEKLMI EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHH KSVGDTVKKDQLIYEIYSPDLINAQDDYLLAMDTAKANGQGRYKDLVRNAGLRLSFLGFN HHHCCHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEECCC DRQIKQLAESHQTQYRVPFYAKEDGIVKALDIRDGMYIQPSTEVMSVVDLSKVWVIADVF HHHHHHHHHHCCCEEECCEEECCCCCEEEEECCCCEEECCCHHHHHHHHHHHHEEEEEHH ENEQSWIAKGQKAEIAVPAMNISGIEGTIDYIYPELDPVTRSLRVRVVLNNTEVDLRPKT CCCHHHHHCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEECCEEECCCCC LAKVSLFGGPNKDVLVIPQEALIQTGKENRVIVKQTDDSFTAKAVTVGMMSQGKAEIISG EEEEEECCCCCCCEEEECHHHHHHCCCCCEEEEEECCCCCEEEEEEEEHHCCCHHHHHHC LNEGERVVISGQFLLDSEASLKGSLMRLSSGHQH CCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]