Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160877404

Identifier: 160877404

GI number: 160877404

Start: 5081282

End: 5081542

Strand: Direct

Name: 160877404

Synonym: Sbal195_4302

Alternate gene names: NA

Gene position: 5081282-5081542 (Clockwise)

Preceding gene: 160877403

Following gene: 160877405

Centisome position: 95.03

GC content: 49.04

Gene sequence:

>261_bases
ATGAAAACACTAACTAATCTCGCCTTAATCGCATTCTTGCTGAGCAGCACTAGCGTGTTTGCCACGGCTACGCCGCACGA
ACATCAACACGACAATGCAAATCCGCAGCAACAAGCACAAACCTATGTTTGTCCTATGCACCCCGAAGTGACAGGCACTA
AAGGCGATTCCTGCCCTGAATGTGGTATGGATTTAGAGCCAAAGGCGACGGAAGTAAAAACAGCTGAAGGTACGATGCAC
AACGCGCACGAACACCACTAA

Upstream 100 bases:

>100_bases
GTGGCATTAATCCGTCTATCGAAGCGAACCGCTTTGAACCACTATGCTCACAGACGTTTATGCGCTCATATTCGGCCGTT
AATCCGATGGAGTGAATAAT

Downstream 100 bases:

>100_bases
GCTAGGCTGGAGATGAGGCATATGAACCAATTTAATACAGTAAAAAAGCAGGCCCCTAAGGCCGTACTGATCTTGAGTAG
CTTACTCATCAGTACGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion Protein HlyD

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKTLTNLALIAFLLSSTSVFATATPHEHQHDNANPQQQAQTYVCPMHPEVTGTKGDSCPECGMDLEPKATEVKTAEGTMH
NAHEHH

Sequences:

>Translated_86_residues
MKTLTNLALIAFLLSSTSVFATATPHEHQHDNANPQQQAQTYVCPMHPEVTGTKGDSCPECGMDLEPKATEVKTAEGTMH
NAHEHH
>Mature_86_residues
MKTLTNLALIAFLLSSTSVFATATPHEHQHDNANPQQQAQTYVCPMHPEVTGTKGDSCPECGMDLEPKATEVKTAEGTMH
NAHEHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9366; Mature: 9366

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTNLALIAFLLSSTSVFATATPHEHQHDNANPQQQAQTYVCPMHPEVTGTKGDSCPE
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCEECCCCCCCCCCCCCCCCCC
CGMDLEPKATEVKTAEGTMHNAHEHH
CCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKTLTNLALIAFLLSSTSVFATATPHEHQHDNANPQQQAQTYVCPMHPEVTGTKGDSCPE
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCEECCCCCCCCCCCCCCCCCC
CGMDLEPKATEVKTAEGTMHNAHEHH
CCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA