Definition | Shewanella baltica OS195 chromosome, complete genome. |
---|---|
Accession | NC_009997 |
Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877337
Identifier: 160877337
GI number: 160877337
Start: 5012868
End: 5013758
Strand: Direct
Name: 160877337
Synonym: Sbal195_4235
Alternate gene names: NA
Gene position: 5012868-5013758 (Clockwise)
Preceding gene: 160877336
Following gene: 160877339
Centisome position: 93.75
GC content: 45.12
Gene sequence:
>891_bases ATGAAAACAGCTTCACAGGCGATGATGTCATTCACGTTAGCCTCAAGTACCCTGCTCGCCTCATATGCAGCACAAGCAAA TCCTGTTGAAACATCAAGGGAATATAAGTTACTGCTCGACCCAAGCCACTTTAATTATGCAACTCAAAGCACAACCGCCA ATAGCTATCTAACGGATGCTAAACAAGCTATTAGCAACGCAATTAGTCGCAATGTCACAGGCTCTTGGGCATTAACCAAA GCTCGTCAAGTGGCCTTCTATGACACCCCAACCAGTTGTCAGCTAAAGCAGTTAGGTTATATCTTTCGTAACCGAACGAG CGACGGCAAAAGTGAAGTGACGCTTAAATTTCGCAGCCCTGATCGATTTATTGCTGACTTTGAAGATCTCAGCTCACCCG ATAATCAAGCCGACACTAAACTCGAAGCCGACATCAGTACTGATATCAATAATGGCATCCGCATCGTGTATAGCCATTCA ACCACCACGCCAAACACCCGCACCTTAAATGATATGGCCGATGTAAATAGTCATTTTTCAGGCTTTGCCGACACTTACGG TTTAAGTAACAATCTCACACTCACCAAAGTCGGTGGCCTTACGATTAATGAATATGTGTTTGAAGGCAGTGAAATCGATT TAGGTAGCATAGACGCCTCACTCGAACTCACGCTGTGGTACACCAGCTCCCCAAATGCCTCGCAGCAACCCGTTATTGCC GAAGTGTCCTTTAAATATAAAGATCCCACTGGCAATTACACTGCCAAAGTCGTGCAAAGAGCTAAGCTGGCTTTAGACGC TATGGCGCAAATGAGTGCGTGGAACTCAACGAGTTCACTGACTAAAACTGCTTTTATCTATGCAGCAACACCCAATTTCT GCAGTCAATAG
Upstream 100 bases:
>100_bases GTCTTTAGTGGTGGCTCATGACACACTCAGGTTGTAATAGAAGTCGTTATCGCGAAAACATAAACAACCTTGCATCAGCA CATCACTTAAGGATTAACCG
Downstream 100 bases:
>100_bases CGACACAAATCAGCGTCGTTAACACTAATACCAATCGCATTAAATATCTGTTAATTAAGCGGGAATTCAACGCGCTTTAG ACAAGGCGAAGGCTTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKTASQAMMSFTLASSTLLASYAAQANPVETSREYKLLLDPSHFNYATQSTTANSYLTDAKQAISNAISRNVTGSWALTK ARQVAFYDTPTSCQLKQLGYIFRNRTSDGKSEVTLKFRSPDRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHS TTTPNTRTLNDMADVNSHFSGFADTYGLSNNLTLTKVGGLTINEYVFEGSEIDLGSIDASLELTLWYTSSPNASQQPVIA EVSFKYKDPTGNYTAKVVQRAKLALDAMAQMSAWNSTSSLTKTAFIYAATPNFCSQ
Sequences:
>Translated_296_residues MKTASQAMMSFTLASSTLLASYAAQANPVETSREYKLLLDPSHFNYATQSTTANSYLTDAKQAISNAISRNVTGSWALTK ARQVAFYDTPTSCQLKQLGYIFRNRTSDGKSEVTLKFRSPDRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHS TTTPNTRTLNDMADVNSHFSGFADTYGLSNNLTLTKVGGLTINEYVFEGSEIDLGSIDASLELTLWYTSSPNASQQPVIA EVSFKYKDPTGNYTAKVVQRAKLALDAMAQMSAWNSTSSLTKTAFIYAATPNFCSQ >Mature_296_residues MKTASQAMMSFTLASSTLLASYAAQANPVETSREYKLLLDPSHFNYATQSTTANSYLTDAKQAISNAISRNVTGSWALTK ARQVAFYDTPTSCQLKQLGYIFRNRTSDGKSEVTLKFRSPDRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHS TTTPNTRTLNDMADVNSHFSGFADTYGLSNNLTLTKVGGLTINEYVFEGSEIDLGSIDASLELTLWYTSSPNASQQPVIA EVSFKYKDPTGNYTAKVVQRAKLALDAMAQMSAWNSTSSLTKTAFIYAATPNFCSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32403; Mature: 32403
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTASQAMMSFTLASSTLLASYAAQANPVETSREYKLLLDPSHFNYATQSTTANSYLTDA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH KQAISNAISRNVTGSWALTKARQVAFYDTPTSCQLKQLGYIFRNRTSDGKSEVTLKFRSP HHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC DRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHSTTTPNTRTLNDMADVNSHFS CCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC GFADTYGLSNNLTLTKVGGLTINEYVFEGSEIDLGSIDASLELTLWYTSSPNASQQPVIA CCHHHCCCCCCEEEEEECCEEEEHEEECCCCEECCCCCCEEEEEEEEECCCCCCCCCEEE EVSFKYKDPTGNYTAKVVQRAKLALDAMAQMSAWNSTSSLTKTAFIYAATPNFCSQ EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHCCC >Mature Secondary Structure MKTASQAMMSFTLASSTLLASYAAQANPVETSREYKLLLDPSHFNYATQSTTANSYLTDA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHH KQAISNAISRNVTGSWALTKARQVAFYDTPTSCQLKQLGYIFRNRTSDGKSEVTLKFRSP HHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCC DRFIADFEDLSSPDNQADTKLEADISTDINNGIRIVYSHSTTTPNTRTLNDMADVNSHFS CCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC GFADTYGLSNNLTLTKVGGLTINEYVFEGSEIDLGSIDASLELTLWYTSSPNASQQPVIA CCHHHCCCCCCEEEEEECCEEEEHEEECCCCEECCCCCCEEEEEEEEECCCCCCCCCEEE EVSFKYKDPTGNYTAKVVQRAKLALDAMAQMSAWNSTSSLTKTAFIYAATPNFCSQ EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA