Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877336
Identifier: 160877336
GI number: 160877336
Start: 5011194
End: 5012735
Strand: Direct
Name: 160877336
Synonym: Sbal195_4234
Alternate gene names: NA
Gene position: 5011194-5012735 (Clockwise)
Preceding gene: 160877335
Following gene: 160877337
Centisome position: 93.71
GC content: 46.89
Gene sequence:
>1542_bases ATGAAAAATGTGCTCGTCACCTCAGGCTTGTGCCTGTCAGTTTTGCTACTGAGTGCTTGTAATTCGGATGATAAAGACAT CAATAGCCTGACCACACAAACCACCTTAATTGGCGGTGATAGCCACTGCTGGATGGGCGGCACTCGCACAGATTCGGGTC TTGATAACAACGATAACGGCAAGCTCGACAGTAATGAAGTGGTTGATAGCAGCTATGCATGTAACGCCGACCTGTTTACG GACAAAGCGGTGCATTTACCTTTCACTGTGCTGCGCGATGATTTAGACAATGGCGCTATGCCTGGTACTAAATTTGAAAT TCGTAACGGCGGCTATGGCTCTGATGCAGCGCCCAACCCCAATAACCCTATTCAATTTTATGCCCTCACCGATCGCGGCC CGAATGCAGATTACAGCGGTAGTTTAGGCAAAGGAAAAATGTTTCCAACGCCTGACTACACGCCACGTATCGGTTTGTTT GAACTGCAAACCAATGGCACTATCACTAAGGTCAAAGACATCTTATTTAAACGCCCTGATGGCAGCTTGATCACTGGACT GCCTAATAGCAGTAGCCTTGGAGGCACAGGAGAAATCCCCTATGACGCAGCAGGTGAAGTCATTCGTCAAGACATGAGCC AGCCTTATAATGCCCAGACCAACCCCATCAAACTCGATGATTATGGGTTAGATTCCGAAGGTCTCGCCGCCATGGATGAT GGCAGTTTTTGGGTCAGCGATGAGTATGGTCCACACATAGTGCATTACTCGGCTGAAGGGGTAGAAATAGCGCGGATTAA TCCTTTCGCAGACGATGCACGCAACTTATATAGCCTACCGGCAGAATTTGCTCATCGCCGTGCCAACCGCGGGATGGAAG GGCTGACCATCACGCCCGATCAGTCGACACTTGTGGGCATAATGCAATCGACCATCTCCAATCCCGATAAGAGTGTTAAC AACAATACCCTGACTCGAATCGTGACCATCAACTTAGCGACAGGCGCTATTAGCCAATATTTATATCAGCAAGAAATTGC CCAAAACTCTAACTCAGCAATCGTTGCCTTAAGTAACAGCCAATTTTTAGTGTTAGAACGTGATGGCAAGTTTTTTAATA TCGACACTGATGTGATGAAGCATGTGTACAAGATAGATATCAGCGGCGCGACAGATCTCGAGACCGTCACTGCACAAGCT GATATAGCCCAAGATGCGGCGTTAGGTTTAACCATTAAAGGTAAAACCTTAGAGCAGGTAGCGCTAAGCGATGGCTGGGA GGCACTTGCAGCTAATGGCATCATACCCGCGACAAAATCACTGGTGCTAGATATGGCTGCCAAAACACAATATCCCCATG ACAAAATGGAGGGTTTGTGGCTAATTGATAATAAGCGTTTAGGTGTGCTAAATGACGACGACTTCGCCACTTGGAGTAAT AACAACACCTTAGAACAGAAATATCTCGATAGTGCGCAAAGTGATATCGACGGCAACACTTTGTATATCGTTGACGACTT ACCCTTATCGGCTGACAAATAA
Upstream 100 bases:
>100_bases ATACGTTAAGCGGCACACTTGTCACATTTAGTTCACAGCCTAACTTTATATTACCTGCCAACAACATAGCTAATCACTTT AAGAATCGGGATATATTAAG
Downstream 100 bases:
>100_bases CCATTAAGTATTCAGCCGCATGAGTCATCACTGTCTTTAGTGGTGGCTCATGACACACTCAGGTTGTAATAGAAGTCGTT ATCGCGAAAACATAAACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLIGGDSHCWMGGTRTDSGLDNNDNGKLDSNEVVDSSYACNADLFT DKAVHLPFTVLRDDLDNGAMPGTKFEIRNGGYGSDAAPNPNNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLF ELQTNGTITKVKDILFKRPDGSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNAQTNPIKLDDYGLDSEGLAAMDD GSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNLYSLPAEFAHRRANRGMEGLTITPDQSTLVGIMQSTISNPDKSVN NNTLTRIVTINLATGAISQYLYQQEIAQNSNSAIVALSNSQFLVLERDGKFFNIDTDVMKHVYKIDISGATDLETVTAQA DIAQDAALGLTIKGKTLEQVALSDGWEALAANGIIPATKSLVLDMAAKTQYPHDKMEGLWLIDNKRLGVLNDDDFATWSN NNTLEQKYLDSAQSDIDGNTLYIVDDLPLSADK
Sequences:
>Translated_513_residues MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLIGGDSHCWMGGTRTDSGLDNNDNGKLDSNEVVDSSYACNADLFT DKAVHLPFTVLRDDLDNGAMPGTKFEIRNGGYGSDAAPNPNNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLF ELQTNGTITKVKDILFKRPDGSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNAQTNPIKLDDYGLDSEGLAAMDD GSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNLYSLPAEFAHRRANRGMEGLTITPDQSTLVGIMQSTISNPDKSVN NNTLTRIVTINLATGAISQYLYQQEIAQNSNSAIVALSNSQFLVLERDGKFFNIDTDVMKHVYKIDISGATDLETVTAQA DIAQDAALGLTIKGKTLEQVALSDGWEALAANGIIPATKSLVLDMAAKTQYPHDKMEGLWLIDNKRLGVLNDDDFATWSN NNTLEQKYLDSAQSDIDGNTLYIVDDLPLSADK >Mature_513_residues MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLIGGDSHCWMGGTRTDSGLDNNDNGKLDSNEVVDSSYACNADLFT DKAVHLPFTVLRDDLDNGAMPGTKFEIRNGGYGSDAAPNPNNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLF ELQTNGTITKVKDILFKRPDGSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNAQTNPIKLDDYGLDSEGLAAMDD GSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNLYSLPAEFAHRRANRGMEGLTITPDQSTLVGIMQSTISNPDKSVN NNTLTRIVTINLATGAISQYLYQQEIAQNSNSAIVALSNSQFLVLERDGKFFNIDTDVMKHVYKIDISGATDLETVTAQA DIAQDAALGLTIKGKTLEQVALSDGWEALAANGIIPATKSLVLDMAAKTQYPHDKMEGLWLIDNKRLGVLNDDDFATWSN NNTLEQKYLDSAQSDIDGNTLYIVDDLPLSADK
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55496; Mature: 55496
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLIGGDSHCWMGGTRTDSGLDNNDNG CCCEEEECHHHHHHHHHHHCCCCCCHHHHHEEEEEEECCCCCEECCCCCCCCCCCCCCCC KLDSNEVVDSSYACNADLFTDKAVHLPFTVLRDDLDNGAMPGTKFEIRNGGYGSDAAPNP CCCCCHHCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC NNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLFELQTNGTITKVKDILFKRPD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHEECCC GSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNAQTNPIKLDDYGLDSEGLAAMDD CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECC GSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNLYSLPAEFAHRRANRGMEGLTITPD CCEEEECCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCEECCC QSTLVGIMQSTISNPDKSVNNNTLTRIVTINLATGAISQYLYQQEIAQNSNSAIVALSNS CHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCC QFLVLERDGKFFNIDTDVMKHVYKIDISGATDLETVTAQADIAQDAALGLTIKGKTLEQV EEEEEECCCCEEEECHHHHCEEEEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCHHHHH ALSDGWEALAANGIIPATKSLVLDMAAKTQYPHDKMEGLWLIDNKRLGVLNDDDFATWSN HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCCEEEEECCCCCEEECC NNTLEQKYLDSAQSDIDGNTLYIVDDLPLSADK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKNVLVTSGLCLSVLLLSACNSDDKDINSLTTQTTLIGGDSHCWMGGTRTDSGLDNNDNG CCCEEEECHHHHHHHHHHHCCCCCCHHHHHEEEEEEECCCCCEECCCCCCCCCCCCCCCC KLDSNEVVDSSYACNADLFTDKAVHLPFTVLRDDLDNGAMPGTKFEIRNGGYGSDAAPNP CCCCCHHCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCC NNPIQFYALTDRGPNADYSGSLGKGKMFPTPDYTPRIGLFELQTNGTITKVKDILFKRPD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHEECCC GSLITGLPNSSSLGGTGEIPYDAAGEVIRQDMSQPYNAQTNPIKLDDYGLDSEGLAAMDD CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECC GSFWVSDEYGPHIVHYSAEGVEIARINPFADDARNLYSLPAEFAHRRANRGMEGLTITPD CCEEEECCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCEECCC QSTLVGIMQSTISNPDKSVNNNTLTRIVTINLATGAISQYLYQQEIAQNSNSAIVALSNS CHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCC QFLVLERDGKFFNIDTDVMKHVYKIDISGATDLETVTAQADIAQDAALGLTIKGKTLEQV EEEEEECCCCEEEECHHHHCEEEEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCHHHHH ALSDGWEALAANGIIPATKSLVLDMAAKTQYPHDKMEGLWLIDNKRLGVLNDDDFATWSN HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEECCCEEEEECCCCCEEECC NNTLEQKYLDSAQSDIDGNTLYIVDDLPLSADK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA