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The map label for this gene is yraN [C]

Identifier: 160877291

GI number: 160877291

Start: 4955417

End: 4955743

Strand: Direct

Name: yraN [C]

Synonym: Sbal195_4188

Alternate gene names: 160877291

Gene position: 4955417-4955743 (Clockwise)

Preceding gene: 160877290

Following gene: 160877292

Centisome position: 92.67

GC content: 48.62

Gene sequence:

>327_bases
ATGACACTCGGACAGCAGGCAGAAGCGCACGCACAACGTTACCTTGAACAGCAAGGGTTAACTTTTGTCGAACGTAATGT
CCGCTATCCGTTTGGGGAAATTGATTTAATCATGCGCCATAAGAGCCATTGGGTATTTGTTGAAGTGAAGTATCGCTCGG
CAACCCAATATGGCGGCGCATTACAGGCTTTAAGCGCTGCGCAAATCACGCGGATTCGCAAAGCGGCCAACCACTATTTG
CAACTCAATAGACTCGATGTGCCCTGTCGTTTCGATGTCATCGCCATGGAAGCCGATCAAATTCATTGGCTCGTCGATGC
CTTTTAA

Upstream 100 bases:

>100_bases
AATTCAATGGCCGCAGCGGCGCTTTATCGGTTAGCCCAGATGGCATAGTAAACCGCCAATTAAGCTGGGGACGTTACCAA
AGAGGCAGCTTCCGCCAGCT

Downstream 100 bases:

>100_bases
GCGCCAATAGTGCGAGAGTAGCAACACAAATTATTTTTAACGTCTGTGCCTCAACACGCTTGTGGAAATATGGCATGATA
GCAACACTTTATCCTGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTLGQQAEAHAQRYLEQQGLTFVERNVRYPFGEIDLIMRHKSHWVFVEVKYRSATQYGGALQALSAAQITRIRKAANHYL
QLNRLDVPCRFDVIAMEADQIHWLVDAF

Sequences:

>Translated_108_residues
MTLGQQAEAHAQRYLEQQGLTFVERNVRYPFGEIDLIMRHKSHWVFVEVKYRSATQYGGALQALSAAQITRIRKAANHYL
QLNRLDVPCRFDVIAMEADQIHWLVDAF
>Mature_107_residues
TLGQQAEAHAQRYLEQQGLTFVERNVRYPFGEIDLIMRHKSHWVFVEVKYRSATQYGGALQALSAAQITRIRKAANHYLQ
LNRLDVPCRFDVIAMEADQIHWLVDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=115, Percent_Identity=42.6086956521739, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3990_SHEB2 (B8EBD9)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002359886.1
- ProteinModelPortal:   B8EBD9
- GeneID:   7086206
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_3990
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 12562; Mature: 12430

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGQQAEAHAQRYLEQQGLTFVERNVRYPFGEIDLIMRHKSHWVFVEVKYRSATQYGGA
CCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCH
LQALSAAQITRIRKAANHYLQLNRLDVPCRFDVIAMEADQIHWLVDAF
HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
TLGQQAEAHAQRYLEQQGLTFVERNVRYPFGEIDLIMRHKSHWVFVEVKYRSATQYGGA
CCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCH
LQALSAAQITRIRKAANHYLQLNRLDVPCRFDVIAMEADQIHWLVDAF
HHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA