Click here to switch to the map view.

The map label for this gene is yraM [C]

Identifier: 160877290

GI number: 160877290

Start: 4953516

End: 4955420

Strand: Direct

Name: yraM [C]

Synonym: Sbal195_4187

Alternate gene names: 160877290

Gene position: 4953516-4955420 (Clockwise)

Preceding gene: 160877285

Following gene: 160877291

Centisome position: 92.64

GC content: 49.08

Gene sequence:

>1905_bases
GTGTTAAAAAGCCTGAATACAACTAAGTTCGTTTCCGTGGCCATTTTATCGGTAATCTTGGCGGGTTGTGGTGTTTCATC
GCCCAATTCCACTGGAACAACCGCCACATTGGCTACCTCATTAGCATCCGCACCTTTGACGGCAAATGTCTATTTGGCGC
AAGCGGCCAATAGTAAAGATCCGCAGCAGCGCGATACTAATCTGCTGCTAGCAGCCCATGCCTATATTAATGCCAATGAC
TATGCCGCGGCGCAGAAGCTGCTTAAATCGATACTGCCGAGCTTAACTCAGAGCCCAACATTACTGGCCGAACATAAATA
CTTAACTGCACGTGTGCTTGAACACACGTCCACCTACAGTGATGCCATTAAAACCTTAAATTATCCAAGTAATTGGAGCC
TGCCAAGCTGGCAGATGACGGCCTATCACCAGTTCAAAGCGCATTTATATCAATTGAATAAACAGCCAATTGAACAAGTA
CGCGAGTTGAGTTTACTGACTACTTACTTGCCACCCGCCCAAGCCAACGAAGTGAATAACACCATTTGGCAAGTGCTGCA
GCCGATGCACGAACAAACCATAAAGACGTTTACGCAAGATGCTAAAAGTCCAGTGTTTGCAGGCTGGTTACAACTGGCTT
ATATCGCTAAGCATTATGCCGTCGATCCCACCCAGTTAGTGCGCTACTTAGGTGAATGGCAGAAACAAAATCCTTATCAC
CCAGCTGCGGCAAAGTTGCCTGCCGATTTAGACAGAGCCCTCAACGCTAAGCCTTTTACACCGAAAAACATTGCCGTGCT
GTTGCCGCTGACTGGCCCAAGAGCGAACGCCGCCAATGCGATTCGCCAAGGCATATTAGCCAGCTATATGGCGAAGCAAA
ACGATAAAGTCGCAGTGAATTTTTACGATACGGCCAACGATGCGGCGAGTGCCTATCAACAGGCGCTGATGGCGGGAGCC
GAGTTTATTATTGGCCCATTACTGCCGACTGAAATCGAACAACTGCAAGTGATGAATGCGGCAAATACTGCCGCCACTAA
TGCAGTGGCCAATGCTGCCAACCCAGACAAAACGGCCAATACGGTTGCAGCGGCTCCTGCTGCGCCTGTACCACAACTCT
TTTTGAATCAAGTGGATAAATTCACACCCGATCCAAACAAATTCTACTTTGCGCTATCGCCAGCCCAAGAAGCAGCCGAT
GCCGCCGAGCATTTATATCAAGATGGCGTCACTATGCCATTGCTGCTCGCCAGCAATGATGCCCTTGGCAAACGTATGGC
CGAGAGCTTTATTCAAGCGTGGAAAAAGAAGAGCGATAACGTCGTCGAAGTCTATTACTACGATGGCGGCGACAAAATGA
AAACCACAGTGCAAGATGCCCTTGGCGTTCGTGATAGCCAAGCCCGTATCGCGCGCATCAAGGAGCTGCTGGGTAACTCA
GTGCAGGCTGACTTCCGCTCACGCCAAGATATTGATGCCATTTATATGATTTCAACGCCGCAGGATCTGACTCTGCTCAA
GGCCTTTATCGACGTTAACTTCAGCGTGTTCACTCAACCTGTGCCCTTGTATACCTCAAGCCGCAGCCGAGTTGAGAACG
AAAGCACACAAACTGCGCAGGATTTAAATAACCTCACCCTCAGCGATGCCCCTTGGCTGATGCAAAACGGCGAAGAAAAC
CTAATGGTCAACACACTATTTTCGGGCTGGAATAACAGTCAGAAACGTTTGTTTGTTATGGGTTATGATGCGATGGACTT
GATCGGCCGTTTAGCACAAATGCGCTCATTTACGGGTTACCAATTCAATGGCCGCAGCGGCGCTTTATCGGTTAGCCCAG
ATGGCATAGTAAACCGCCAATTAAGCTGGGGACGTTACCAAAGAGGCAGCTTCCGCCAGCTATGA

Upstream 100 bases:

>100_bases
GCTTTGGTCCATATATACCTCTGTAATGACAGTGCCAAGACTTTCGTCAAGCGCGAGAGAAGGTTAAACTAGAGGCCGCA
TCTTACCAGAGTGAAGCCCA

Downstream 100 bases:

>100_bases
CACTCGGACAGCAGGCAGAAGCGCACGCACAACGTTACCTTGAACAGCAAGGGTTAACTTTTGTCGAACGTAATGTCCGC
TATCCGTTTGGGGAAATTGA

Product: LppC family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLTANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEHKYLTARVLEHTSTYSDAIKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPPAQANEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAAPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVSPDGIVNRQLSWGRYQRGSFRQL

Sequences:

>Translated_634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLTANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEHKYLTARVLEHTSTYSDAIKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPPAQANEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAAPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVSPDGIVNRQLSWGRYQRGSFRQL
>Mature_634_residues
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLTANVYLAQAANSKDPQQRDTNLLLAAHAYINAND
YAAAQKLLKSILPSLTQSPTLLAEHKYLTARVLEHTSTYSDAIKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQV
RELSLLTTYLPPAQANEVNNTIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVNFYDTANDAASAYQQALMAGA
EFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTANTVAAAPAAPVPQLFLNQVDKFTPDPNKFYFALSPAQEAAD
AAEHLYQDGVTMPLLLASNDALGKRMAESFIQAWKKKSDNVVEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNS
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQDLNNLTLSDAPWLMQNGEEN
LMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGYQFNGRSGALSVSPDGIVNRQLSWGRYQRGSFRQL

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=359, Percent_Identity=27.8551532033426, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 69746; Mature: 69746

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLTANVYLAQAANSKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC
PQQRDTNLLLAAHAYINANDYAAAQKLLKSILPSLTQSPTLLAEHKYLTARVLEHTSTYS
CCHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAIKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQVRELSLLTTYLPPAQANEVNN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHH
TIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVN
CHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FYDTANDAASAYQQALMAGAEFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTAN
EECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVAAAPAAPVPQLFLNQVDKFTPDPNKFYFALSPAQEAADAAEHLYQDGVTMPLLLASND
CEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCH
ALGKRMAESFIQAWKKKSDNVVEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHH
DLNNLTLSDAPWLMQNGEENLMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGY
HHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCE
QFNGRSGALSVSPDGIVNRQLSWGRYQRGSFRQL
EECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKSLNTTKFVSVAILSVILAGCGVSSPNSTGTTATLATSLASAPLTANVYLAQAANSKD
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC
PQQRDTNLLLAAHAYINANDYAAAQKLLKSILPSLTQSPTLLAEHKYLTARVLEHTSTYS
CCHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAIKTLNYPSNWSLPSWQMTAYHQFKAHLYQLNKQPIEQVRELSLLTTYLPPAQANEVNN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHH
TIWQVLQPMHEQTIKTFTQDAKSPVFAGWLQLAYIAKHYAVDPTQLVRYLGEWQKQNPYH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PAAAKLPADLDRALNAKPFTPKNIAVLLPLTGPRANAANAIRQGILASYMAKQNDKVAVN
CHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
FYDTANDAASAYQQALMAGAEFIIGPLLPTEIEQLQVMNAANTAATNAVANAANPDKTAN
EECCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TVAAAPAAPVPQLFLNQVDKFTPDPNKFYFALSPAQEAADAAEHLYQDGVTMPLLLASND
CEECCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCH
ALGKRMAESFIQAWKKKSDNVVEVYYYDGGDKMKTTVQDALGVRDSQARIARIKELLGNS
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
VQADFRSRQDIDAIYMISTPQDLTLLKAFIDVNFSVFTQPVPLYTSSRSRVENESTQTAQ
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHH
DLNNLTLSDAPWLMQNGEENLMVNTLFSGWNNSQKRLFVMGYDAMDLIGRLAQMRSFTGY
HHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCE
QFNGRSGALSVSPDGIVNRQLSWGRYQRGSFRQL
EECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]