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The map label for this gene is tapC [H]

Identifier: 160877165

GI number: 160877165

Start: 4794489

End: 4795760

Strand: Direct

Name: tapC [H]

Synonym: Sbal195_4061

Alternate gene names: 160877165

Gene position: 4794489-4795760 (Clockwise)

Preceding gene: 160877164

Following gene: 160877166

Centisome position: 89.66

GC content: 45.99

Gene sequence:

>1272_bases
ATGGCTACGGCAACGACCACAAGAAAGCCTCGCACCAAGAAAGCCGAGCAAAAAAGCCAACCAAAAATCTATACCTTTGA
ATGGAAAGGCCTAAATCGCGACGGTAAGAAGACTGCAGGTGAACTCAGAGGCGCAACTGCCGCCGAAATCCGTAGTCAGT
TAAAATCCCAAGGAGTTAACCCTAAGAGCGTTCGTAAGCAGTCCTCTGCGCTATTTAAGTTAGGTGATCCGAAAATCACC
CCTATGGATATTGCCATGATGACCCGCCAAGTTGCGACTATGCTAGCGGCGGGCGTACCTTTAGTGACCACTATTGAGCT
ACTCGGCCGTGGTCACGAAAAAGCTAAGATGAGGGAACTATTAGGAAATATCCTCAGCGAAATTCAATCTGGCATTCCTT
TATCTGATGCAATGCGTCCCCATAGACGCTACTTCGATGAGCTATATGTTGACCTAGTTGCAGCAGGTGAACATTCAGGT
TCACTAGACTTGGTCTTCGATCGCGTGGCTACTTACAGAGAGAAAACGGAAGCTCTCAAATCCAAAATTAAGAAGGCCAT
GTTCTATCCGGCTGCTGTTGTCATAGTCGCACTATTAGTAACAACATTATTACTTCTATTTGTAGTGCCTCAATTCGAAG
AGATATTCAAAGGCTTTGGCGCTGAACTACCCGCCTTTACTCAATTAGTACTACACATTTCCCGCGGCTTACAATCCTCT
TGGTATATCTTCTTAGCAGCTATCGTCGGCGGAGTATTTTTGTTCGTTCGAGCCCACAGAAACTCACAAATTGTGCGAGA
TAGAGTCGATGAAGCTGTGCTTAAAATCCCCGCTATTGGGCCTATATTACATAAAGGTGCCATGGCACGATTCGCCCGCA
CTTTAGCAACTACTTTCGCCGCGGGCGTGCCGTTAATTGATGGTCTAGAGTCTGCCGCTGGCGCATCGGGTAATGCGGTA
TACCGCAAAGCCATTTTAAAAATCCGTCAAGAAGTGATGGCAGGGATGCAGATGAATGTGGCTATGCAAACCACAGGGCT
TTTCCCCGACATGTTAGTGCAAATGGTGATGATAGGCGAAGAATCCGGTTCACTAGATAACATGCTCAATAAAGTATCAA
CCATCTACGAAATGCAAGTAGATGATGCGGTTGATGGCTTATCAAGCCTGATAGAACCGATTATGATGGTGGTCATCGGT
ACTGTAGTTGGTGGTCTAATTGTTGCTATGTACTTGCCTATCTTCCAAATGGGTAAAATTGTTAGCGGCTAG

Upstream 100 bases:

>100_bases
ATTATTACTCGTATATTTGAATCTTAGAGTCCAAACTATTTCGCAAGCACAGCGTTCAGTTAACTAGAAATCTAGAACGA
TTTATTTACAGGGATAATTT

Downstream 100 bases:

>100_bases
TATTATATCTAACCCTCAAATATAAATAAGAACATTAAATGTCAGAATTCATCTCCATTTTGGGCCAGCACCCTTATCTT
TTTATGGCTCTAAGCTTTAT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MATATTTRKPRTKKAEQKSQPKIYTFEWKGLNRDGKKTAGELRGATAAEIRSQLKSQGVNPKSVRKQSSALFKLGDPKIT
PMDIAMMTRQVATMLAAGVPLVTTIELLGRGHEKAKMRELLGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSG
SLDLVFDRVATYREKTEALKSKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLAAIVGGVFLFVRAHRNSQIVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFAAGVPLIDGLESAAGASGNAV
YRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGEESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIG
TVVGGLIVAMYLPIFQMGKIVSG

Sequences:

>Translated_423_residues
MATATTTRKPRTKKAEQKSQPKIYTFEWKGLNRDGKKTAGELRGATAAEIRSQLKSQGVNPKSVRKQSSALFKLGDPKIT
PMDIAMMTRQVATMLAAGVPLVTTIELLGRGHEKAKMRELLGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSG
SLDLVFDRVATYREKTEALKSKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
WYIFLAAIVGGVFLFVRAHRNSQIVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFAAGVPLIDGLESAAGASGNAV
YRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGEESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIG
TVVGGLIVAMYLPIFQMGKIVSG
>Mature_422_residues
ATATTTRKPRTKKAEQKSQPKIYTFEWKGLNRDGKKTAGELRGATAAEIRSQLKSQGVNPKSVRKQSSALFKLGDPKITP
MDIAMMTRQVATMLAAGVPLVTTIELLGRGHEKAKMRELLGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGS
LDLVFDRVATYREKTEALKSKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSSW
YIFLAAIVGGVFLFVRAHRNSQIVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFAAGVPLIDGLESAAGASGNAVY
RKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGEESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGT
VVGGLIVAMYLPIFQMGKIVSG

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=401, Percent_Identity=28.428927680798, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI1786295, Length=405, Percent_Identity=29.6296296296296, Blast_Score=171, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 46161; Mature: 46030

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATATTTRKPRTKKAEQKSQPKIYTFEWKGLNRDGKKTAGELRGATAAEIRSQLKSQGVN
CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCC
PKSVRKQSSALFKLGDPKITPMDIAMMTRQVATMLAAGVPLVTTIELLGRGHEKAKMREL
HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
LGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGSLDLVFDRVATYREKTEALK
HHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH
WYIFLAAIVGGVFLFVRAHRNSQIVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSG
CCC
>Mature Secondary Structure 
ATATTTRKPRTKKAEQKSQPKIYTFEWKGLNRDGKKTAGELRGATAAEIRSQLKSQGVN
CCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCC
PKSVRKQSSALFKLGDPKITPMDIAMMTRQVATMLAAGVPLVTTIELLGRGHEKAKMREL
HHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
LGNILSEIQSGIPLSDAMRPHRRYFDELYVDLVAAGEHSGSLDLVFDRVATYREKTEALK
HHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SKIKKAMFYPAAVVIVALLVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH
WYIFLAAIVGGVFLFVRAHRNSQIVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AGVPLIDGLESAAGASGNAVYRKAILKIRQEVMAGMQMNVAMQTTGLFPDMLVQMVMIGE
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC
ESGSLDNMLNKVSTIYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]