| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877114
Identifier: 160877114
GI number: 160877114
Start: 4720021
End: 4721070
Strand: Reverse
Name: 160877114
Synonym: Sbal195_4010
Alternate gene names: NA
Gene position: 4721070-4720021 (Counterclockwise)
Preceding gene: 160877115
Following gene: 160877113
Centisome position: 88.29
GC content: 53.71
Gene sequence:
>1050_bases ATGCCGTGCCAGTTAACCCGATTATTTGGAATCGAATTGCCAATTATTCAAGCGCCTATGGCGGGTGTTCAGGGCAGTGC CTTAACGATAGCCGTGTCGCAAGCGGGTGCGTTGGGATCTTTGCCCTGCGCCATGTTATCCCTTGAAGCCTTAGATGCCG CGTTGATACAGGTCCGCGCCCAGACGACTAAGCCCATCAATGTAAACTTCTTTTGTCATCACGAGCCCGAACCGCAAGCG GCGAAACAAGCTGCATGGCTCAAGCAACTCGCGCCTTATTTTGCTGAGCTGGGTATCCATTCTGATACCCACGCTGCGGG AGCACAACGCGCGCCCTACACGAGTGCTCAGGCTGAAGTGTTAGCAAAATTCAAGCCTGAGGTTGTGAGTTTTCACTTTG GTTTACCCAATGAAGACTTGTTGCTGGAGATAAAATCTTGGGGATCTAAGATCATCTCGACGGCGACCACAGTGGAAGAG GCGCTCTGGTTAGAAGCGCGTGGTGTAGATGCTATTATTGCGCAGGGCTTAGAAGCTGGCGGCCATAGAGGACATTTCTT ATCCGATGATTTGACTGAGCAGCTCGGCACTTTTAGTTTATTGCCGCAAATCATTGCTGCCGTTGATGTGCCCGTTATCG CAGCGGGTGGCATAGTCGATGCAAAAACCGTGCGTGCCGCCATGGCGATGGGCGCTTCGGCGGTGCAAGTTGGGACGGCC TATTTACTTTGCCCTGAATGCACCACCAGTGAGATCCATCGCGCCGCACTGCAAAGCGAGGCGGTGCAGCATACGGCTCT GACTAACTTATTTTCTGGTCGCCCCGCACGCGGCATAGTGAATCGTTTTATGGCTGAACTTGGACCTATCAATAACGCAG TACCGGATTTTCCGCTCGCCTCCAGTGCCGTCGCAGTATTGCGAAGCGCCGCCGAGCAACAAGGGTTCGGTGATTTTAGC CCGCTCTGGTGCGGCCAAAATGCAGCCGGCTGTCAGGCGATTCCCGCCGCAGAGCTCACCAAGCAATTGGCGTTAGGCTT GATAGTTTAA
Upstream 100 bases:
>100_bases CGGGATCCCGTGGGCAATTTGTGGTGGATCTCCCAACGTTTAGCCGCAGGACCATATCAGGATTGAGCGTTAAGTGATAA CCAGTCAAAGGAGATGATGT
Downstream 100 bases:
>100_bases GATGTTGTATTAATAGACCATTAATACTCATTGATATGCTCACCAAGGCTTACATTTTACATGGCTAAATTAGCGGCTTG TTAGTTTATACTCACTGTTT
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQA AKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEE ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFS PLWCGQNAAGCQAIPAAELTKQLALGLIV
Sequences:
>Translated_349_residues MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQA AKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEE ALWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFS PLWCGQNAAGCQAIPAAELTKQLALGLIV >Mature_348_residues PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRAQTTKPINVNFFCHHEPEPQAA KQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEVLAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEA LWLEARGVDAIIAQGLEAGGHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTAY LLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLASSAVAVLRSAAEQQGFGDFSP LWCGQNAAGCQAIPAAELTKQLALGLIV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=323, Percent_Identity=31.5789473684211, Blast_Score=143, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36601; Mature: 36470
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRA CCCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH QTTKPINVNFFCHHEPEPQAAKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEV CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEALWLEARGVDAIIAQGLEAG HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH SSAVAVLRSAAEQQGFGDFSPLWCGQNAAGCQAIPAAELTKQLALGLIV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PCQLTRLFGIELPIIQAPMAGVQGSALTIAVSQAGALGSLPCAMLSLEALDAALIQVRA CCCEEHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH QTTKPINVNFFCHHEPEPQAAKQAAWLKQLAPYFAELGIHSDTHAAGAQRAPYTSAQAEV CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH LAKFKPEVVSFHFGLPNEDLLLEIKSWGSKIISTATTVEEALWLEARGVDAIIAQGLEAG HHHCCCCEEEEECCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC GHRGHFLSDDLTEQLGTFSLLPQIIAAVDVPVIAAGGIVDAKTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHCEE YLLCPECTTSEIHRAALQSEAVQHTALTNLFSGRPARGIVNRFMAELGPINNAVPDFPLA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH SSAVAVLRSAAEQQGFGDFSPLWCGQNAAGCQAIPAAELTKQLALGLIV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA